prot_H-elongata_contig5749.13219.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5749.13219.1
Unique Nameprot_H-elongata_contig5749.13219.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length352
Homology
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.190e-55
Identity = 138/242 (57.02%), Postives = 154/242 (63.64%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAKKARTSEASTVDSSSTVR-----EIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQQHAPGVVY---APPPISGIGFPPMLQPGF-PGMMVGPXXXXXXXXXXXXXXXXXX--------FSGPHVPNGQLLGRPVGPIPGGYP 225
            MGKKKK    KDE EAWCYYCDRVFEHEEVLI HQK KH  C  C KKLSTAGGLVVH  QVH+ET+S VPNAKEGR+SVD EIYGINGIP +A AERAAKKAR +  +              E P  +   P QQP     GQ +  Q+ G   Q  PG+++   AP P  G+GF PM QPGF PGMM GPXXXXXXXXXXXX                GP  PNGQ+LG   GP+ GG+P
Sbjct:    1 MGKKKKQKVAKDETEAWCYYCDRVFEHEEVLILHQKTKHLSCMFCKKKLSTAGGLVVHAQQVHRETISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXX--GQGMPPQFNG--HQPMPGMMFPGGAPGP--GMGFHPMGQPGFHPGMM-GPXXXXXXXXXXXXPPPMHGGPNMPPHMLGGPRGPNGQMLG---GPMQGGFP 232          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.370e-41
Identity = 74/103 (71.84%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAKKA 103
            MGKKKK    +++++ WC+YCDRVF+HEEVLIQHQKAKHFKC  CNKKL+TAGGLVVH  QVHKETV+ V NAKEGRES ++EI+G+ GIP +AIAERAA+KA
Sbjct:    1 MGKKKKQKVEEEKEQPWCFYCDRVFDHEEVLIQHQKAKHFKCLVCNKKLTTAGGLVVHCQQVHKETVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKA 103          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A7S3YKR3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKR3_HETAK)

HSP 1 Score: 144 bits (362), Expect = 7.470e-39
Identity = 63/101 (62.38%), Postives = 84/101 (83.17%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAK 101
            MGKKKK +AV++E++ WC+YC+R+FE E+VLIQHQK+KHFKC  CNKKLSTAGG+VVH  QVHKET+  V NA + R++ D+EIYG+ G+P++A+ E  AK
Sbjct:    1 MGKKKKKTAVREEEKPWCFYCERIFEDEKVLIQHQKSKHFKCHVCNKKLSTAGGMVVHCLQVHKETIKNVHNAIKERDTTDYEIYGMEGVPQEAVDEHRAK 101          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A834FYY0_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FYY0_RHOSS)

HSP 1 Score: 141 bits (355), Expect = 4.040e-38
Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 96
            MGKKKK +A+K   E WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+V+H  QVHKE+V  VPNAK GRES D EIYG+ GIP D +A
Sbjct:    1 MGKKKKRAALK---EVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVPKVPNAKPGRESTDIEIYGMQGIPPDVLA 93          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A397IUI9_9GLOM (BED-type domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IUI9_9GLOM)

HSP 1 Score: 142 bits (357), Expect = 8.220e-36
Identity = 74/127 (58.27%), Postives = 93/127 (73.23%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPE-DAIAE-------RAAKKARTSEASTVDSSSTVRE 119
            MGKKK    ++     WC+YC+R FE E+VLIQHQKAKHFKCP CNKKL+TAGG+VVH +QVHKET+ TVPNA +GRESVD EI+G+ GIP+ DA+A        + +KK RT E ST  SS  +++
Sbjct:    1 MGKKKNKKVIRP----WCWYCERDFEDEKVLIQHQKAKHFKCPHCNKKLNTAGGMVVHVAQVHKETIDTVPNAIKGRESVDVEIFGMEGIPQQDAMAHAQSLENNQPSKKMRTEETSTELSSEEIKK 123          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: UPI0007F0076B (protein SUPPRESSOR OF FRI 4 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0076B)

HSP 1 Score: 142 bits (358), Expect = 1.590e-35
Identity = 86/183 (46.99%), Postives = 106/183 (57.92%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAAK-KARTSEASTVDSSSTVREIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQQHAPGVVYAPPPISGIGFPPMLQPGFPGMMVG 182
            MGKKKK +A     + WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D EIYG+ GIP DA+A    + +   S+   VD       IP +                    Q+GG     + G+ Y PPP +G+  PP   P  P   VG
Sbjct:    1 MGKKKKRAAAAVS-DIWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKETVSKVPNAKEGRESTDIEIYGMQGIPADAMAAHYGEDEDNPSKMGKVD-------IPTS--------------------QFGGGALPGSLGIRYPPPPAAGM--PPYYNPAIPMPRVG 153          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA)

HSP 1 Score: 133 bits (335), Expect = 2.750e-35
Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 96
            MG+KKK    K     +CYYCDR F+ E++L+QHQKAKHFKC  CNKKLSTAGG+V+H  QVHKE+V+ VPNAKEGRES + EIYG+ GIP D +A
Sbjct:    1 MGRKKKRQNDK----VFCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIPADVLA 92          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A2U1NS29_ARTAN (Zinc finger, BED-type n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NS29_ARTAN)

HSP 1 Score: 141 bits (355), Expect = 2.930e-35
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 96
            MGKKKK  +  D    WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D E+YG+ GIP D +A
Sbjct:    1 MGKKKKRVSTSD---VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIPADVLA 93          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A1Q3BMZ7_CEPFO (BED-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BMZ7_CEPFO)

HSP 1 Score: 134 bits (338), Expect = 3.750e-35
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 96
            MGKKKK    K     WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE+V+ VPNAK GRES D EIYG+ GIP D +A
Sbjct:    1 MGKKKKRVPSK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDVLA 92          
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Match: A0A2G3A9J0_CAPAN (Protein SUPPRESSOR OF FRI 4 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3A9J0_CAPAN)

HSP 1 Score: 140 bits (352), Expect = 1.100e-34
Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIA 96
            MGKKKK S+     + WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKETVS VPNAKEGRES D E+YG+ GIP D +A
Sbjct:    1 MGKKKKRSSSD---KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKETVSKVPNAKEGRESTDIEVYGMQGIPPDVLA 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5749.13219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ22_9PHAE4.190e-5557.02BED-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZE93_9STRA2.370e-4171.84BED-type domain-containing protein n=1 Tax=Tribone... [more]
A0A7S3YKR3_HETAK7.470e-3962.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A834FYY0_RHOSS4.040e-3867.71Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A397IUI9_9GLOM8.220e-3658.27BED-type domain-containing protein n=1 Tax=Diversi... [more]
UPI0007F0076B1.590e-3546.99protein SUPPRESSOR OF FRI 4 n=1 Tax=Daucus carota ... [more]
T1E1I5_SILLA2.750e-3564.58C2H2-type zinc finger protein (Fragment) n=1 Tax=S... [more]
A0A2U1NS29_ARTAN2.930e-3566.67Zinc finger, BED-type n=2 Tax=Artemisia annua TaxI... [more]
A0A1Q3BMZ7_CEPFO3.750e-3564.58BED-type domain-containing protein (Fragment) n=1 ... [more]
A0A2G3A9J0_CAPAN1.100e-3466.67Protein SUPPRESSOR OF FRI 4 n=4 Tax=Capsicum TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 16..39
e-value: 17.0
score: 11.3
coord: 40..63
e-value: 0.06
score: 22.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..63
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..68
score: 8.954
NoneNo IPR availableGENE3D3.30.160.60coord: 1..70
e-value: 3.9E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR23215ZINC FINGER PROTEIN 207coord: 1..351
IPR003656Zinc finger, BED-typePROSITEPS50808ZF_BEDcoord: 11..70
score: 9.643
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 13..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5749contigH-elongata_contig5749:8173..10979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5749.13219.1mRNA_H-elongata_contig5749.13219.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5749 7708..10979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5749.13219.1 ID=prot_H-elongata_contig5749.13219.1|Name=mRNA_H-elongata_contig5749.13219.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
MGKKKKHSAVKDEKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLS
TAGGLVVHNSQVHKETVSTVPNAKEGRESVDFEIYGINGIPEDAIAERAA
KKARTSEASTVDSSSTVREIPAADVIVPLQQPPAPVQGQAVQQQYGGTHQ
QHAPGVVYAPPPISGIGFPPMLQPGFPGMMVGPPPIFNPMQHGVPQFPPP
MFSGPHVPNGQLLGRPVGPIPGGYPPAPGSLPVRPPINRAPPPPVFPPRH
QFPAGNPPSNGTTNGVPSTPGVPGAARGPTPPLFPAGAGVAQPTISSGPV
LNRQTPPGVLGTPSSGTSALLGVALPIPAAVSGDEEISMEEKRAELAAYK
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR003656Znf_BED
IPR036236Znf_C2H2_sf