prot_H-elongata_contig57433.13211.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57433.13211.1
Unique Nameprot_H-elongata_contig57433.13211.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
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BLAST of mRNA_H-elongata_contig57433.13211.1 vs. uniprot
Match: D8LKB8_ECTSI (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKB8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.130e-16
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0 
Query:   17 TGGGGDAA-SVKVFDRVAKRHQRDRAAASDLEGDYDYLREHIAQVLVDRIE 66
            +GGGGD   +VKVFDR AKR QRDRAAA+D EG++DYLREHIA+VLVDRIE
Sbjct:   28 SGGGGDGTPAVKVFDRTAKRRQRDRAAAADWEGEFDYLREHIARVLVDRIE 78
[Close]
BLAST of mRNA_H-elongata_contig57433.13211.1 vs. uniprot
Match: UPI0009E36D62 (arginine-hydroxylase NDUFAF5, mitochondrial-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E36D62)

HSP 1 Score: 47.4 bits (111), Expect = 7.930e-5
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   13 RLFSTGGGGDAASVKVFDRVAKRHQRDRAAASDLEGDYDYLREHIAQVLVDRI 65
            R FST    D   + VFDR AKR Q++RAA ++    YDYL++ +A+ +VDRI
Sbjct:   19 RCFSTRRQ-DETIMNVFDRKAKRRQKNRAALAENVAVYDYLKDEVAERMVDRI 70
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57433.13211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKB8_ECTSI3.130e-1676.47Methyltransf_11 domain-containing protein n=2 Tax=... [more]
UPI0009E36D627.930e-547.17arginine-hydroxylase NDUFAF5, mitochondrial-like n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57433contigH-elongata_contig57433:2533..2745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57433.13211.1mRNA_H-elongata_contig57433.13211.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57433 2533..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57433.13211.1 ID=prot_H-elongata_contig57433.13211.1|Name=mRNA_H-elongata_contig57433.13211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MLTRRQHVRLAWRLFSTGGGGDAASVKVFDRVAKRHQRDRAAASDLEGDY
DYLREHIAQVLVDRIEVGQE*
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