prot_H-elongata_contig5727.13191.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5727.13191.1
Unique Nameprot_H-elongata_contig5727.13191.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length679
Homology
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 979 bits (2530), Expect = 0.000e+0
Identity = 569/699 (81.40%), Postives = 593/699 (84.84%), Query Frame = 0
Query:    1 MALNVPSALSQPPAQGQQGQGNAVSGS-----QAIIASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVH----EGEDAKEKGSEGNSR--GFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDN-NSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQ---MPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXX------SPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQ 675
            MALN P A++Q PAQG                 A IA YHSASLYVGDLSKDV E TLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKA   LYDTFSLFGNILSCKVATD+ GESKGYGYVHYE GVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP SWDDAKLREEFEKHG +TSCKVQV     +G+++KEK         GFGFVNFEEH+SAVKAIEA N AEMPDGEG TTLYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVT+D MREAF+PYGTITSARVMVDN N+ QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA   QGMY MPYWMGAQPGMPQQPRQ+MMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQ   MPGQPQPRR AGP   XXXXXXXXXXXXXXXXXXXX        GRGNFK+  GVRNQQ PG PNM   XXXXXXX      +P     P P PQ          AP+TNESL+AAALAAAPPEKQKNMIGERLYPLI++GQP LAGKITGMLLEMDNGELLHLLESP++L AKINEALQVLS HQ +
Sbjct:    1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKA---LYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQ-PGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQA---------APATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQE 686          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 689 bits (1778), Expect = 6.920e-240
Identity = 413/659 (62.67%), Postives = 469/659 (71.17%), Query Frame = 0
Query:   31 IASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT--LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYSM--PYWMGAQPG-MPQQPRQY---MMPQMM-PRG-PRG---PMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGN-PNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVH 672
            +  +HSASLYVGDL+ D+TE+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKA   LYDTFSLFGNILSCKVATD+ G SKGYGYVHYET  SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G I S K+Q    + A        SRGFGF+NFE+H++A  A+   NG  +  G  V T  L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V +  +REAF+  GTITS R+M D  +G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM     GMY M  PY M  QPG MPQ PR     MMPQMM PRG PRG    M  Y GRG YPMPAYA  G MP Q       G                        QAQ      +GNFK+   VRN    G  P M   XXXXXXX                            ESLTA ALAAA PE QKNMIGERLYPLIH+ QP+LAGKITGMLLEMDNGELLHLLESP++L AKI EALQVL  H
Sbjct:   57 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKA---LYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPAS------LSRGFGFINFEDHEAAESAVSEMNGKTV-SGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAM-GAMPVQQXXXXXXG-----------------ASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXXQA-------------------ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 630 bits (1626), Expect = 1.590e-217
Identity = 382/666 (57.36%), Postives = 446/666 (66.97%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGA--EMPDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPRGPM---------------PAYGGRGNYPMPAYATPGQMPGQPQPRR----PAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQP-IPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQA 674
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +AN AIAKINGMLIAG +V+VGHF +R  R    +WTN YVK +P  W + ++R+EFE  G + S  V        K+ G+E + +GFGFVNFE+ + A KA+EA NG   + PDG  V  LY  RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +TD+ +REAF  +GTITS+R+M D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G+  RG+PM    MY       AQP  +P Q RQ ++ PQ MMP                      P Y       MPAY  P Q  GQP+ RR    PAGP                         Q  A   R NFK+   VRNQ +P      +P        PA P QP +P                  E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL  HQ+
Sbjct:   25 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVM-------KDAGAE-HHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVE-LYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDT-AGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGY-------MPAYGMPMQPRGQPRGRRQGPGPAGP-------------------------QAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPGVMP--PAAPVQPGVPH----------------LEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 627          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 622 bits (1603), Expect = 2.210e-213
Identity = 392/652 (60.12%), Postives = 453/652 (69.48%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 676
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    +WTN YVK +P +WDD  LR+EFE  G I+SC V        K+  SE N RGFGFVNFEE ++A +A E  N   +   +GV   LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+P GTITS R+M D  +G S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TGM   RG+PM    MY       AQP  MP Q RQ ++ PQ MMPRG  PRGP+P       Y  P    PG   G   P+     XXXXXXXXXXXXX          QA   A   R NFK+    RNQ     P +  P           PQQP   PQ               E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  HQ++E
Sbjct:   71 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM-------KDASSEQN-RGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDP-AGNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP-------YRQPG--VPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQ-----PPVQEPV----------PQQPGGIPQM--------------EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSEE 672          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 2.980e-211
Identity = 403/648 (62.19%), Postives = 458/648 (70.68%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 673
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G + S  V        K+  +   +RGFGFVN+E+ +SA KA++A NG   P GEG+ T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +TDD +REAF+  GTITS+RVM D N G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R             +P           XXXXXXXXXXXXXXXXXXXXXXX  QG A A R NFK+    RN      P   +P        PA P Q            ++ P P     LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   75 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVM-------KDNANPEQNRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR-------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG-APANRRNFKYTANARNH-----PARDAPPQGVMP--PAAPVQ------------NAGPEP-----LTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 5.950e-211
Identity = 387/678 (57.08%), Postives = 457/678 (67.40%), Query Frame = 0
Query:   29 AIIASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMP--DGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQG-MYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMP-----AYGGRGNYPMPAY-----------------ATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 676
            A    +H+ASLYVGD+  +VTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A +AI KINGMLIAG +V VGHF +R+NR   +DWTN Y+K +P +WDDAKLR EFE  G I+SC V        K+  SE N+RGFGFVNFEE ++A +A +  NG  +   D      LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+  GTITSAR+M D  +G S+GFGFVCF+ PEEATKA+T+++GK+L  KPIYVALAQR+EVRR QLEAQ AQ+  +  RGLP+  Q  MY       AQP  +P Q RQ ++ PQ M+PRG  PRGP+P       GG G Y MP Y                   PGQ+         AGP XXXXXXXXXXX                    R NFK+    RNQ          P        PA P            V++  P   T E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  H+ +E
Sbjct:   27 AAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKA---LYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM-------KDTTSE-NNRGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRDP-AGASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGYGMPQYXXXXXXXXXXXXXXXXXGPPGQL---------AGPPXXXXXXXXXXXQNN-----------------RNNFKYTANARNQ----------PSLQEQAPQPAAPA-----------VAAGVP---TLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETEE 642          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 612 bits (1579), Expect = 2.410e-210
Identity = 400/648 (61.73%), Postives = 457/648 (70.52%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 673
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G + S  V        K+  +   +RGFGFVN+++ DSA +A++A NG   P G+GV T +Y  +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF   GTITS+RVM D N G S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R             +PG          XXXXXXXXXXXXXXXXXXXXXXX  QG A A R NFK+    RN      P    P        PA P Q            ++ P P     LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   34 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKA---LYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVM-------KDNANPDQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR-------------VPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG-APANRRNFKYTANARNH-----PAREMPPQGVMP--PAAPVQ------------NAGPEP-----LTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 602 bits (1552), Expect = 2.000e-206
Identity = 385/651 (59.14%), Postives = 442/651 (67.90%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVT-TLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQE 676
            +H+ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  +G SKGYGYVHYET  +AN AIAKINGMLIAG +V VGHF +R +R   ADWTN YVK +P +WDDA LR+EFE  G ITSC V        K+  SEGN RGFGFVNF+E +SA KA+EA N   +   +G    LY  +AQK+SER+REL++K E +KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS R+M D  SG S+GFGFVCF+ PEEATKA+T+MNGK++  KPIYVALAQR+EVRR QLEAQ AQ+  +GM   RG+PM    MY       AQP  MP Q RQ ++ PQ MMPRG                                      XXXXXXXXXXXXXXXXXX    Q QG     R NFK+    RNQ +                +PA P  P+                   E LT+AALAAA P  QKNMIGERL+PLI   QP LAGKITGMLLEMDNGELLHLLESPEAL  KI EA+ VL  H A E
Sbjct:   28 FHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKA---LYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEVFVGHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVM-------KDASSEGN-RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIALYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKDP-SGNSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQSRQGFVYPQQMMPRGGXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXQVPPQMQGQPRNNRNNFKYTANARNQPE---------------VAPAAPAVPV------------------MEPLTSAALAAASPNMQKNMIGERLFPLIEKSQPSLAGKITGMLLEMDNGELLHLLESPEALEGKITEAIAVLEAHMAAE 620          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 2.180e-206
Identity = 372/664 (56.02%), Postives = 431/664 (64.91%), Query Frame = 0
Query:   31 IASYHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR-TG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQ-YMMPQ-MMPRG--PRGP------MPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRG-----NFKFGPGVRN---QQQPGNPNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQ 673
            +  + +ASLYVGD+  DVTE  LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHN+ DAERALDTMNFT IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKA   LYDTFSLFGNILSCKVA D  G+SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R  R    DWTN YVK LP  W DA LR EFE  G + S  V        K+  S  N RGFGFVN+E+ D A  A+E  +G       GV   LY  +AQK++ER+REL+ K +Q+K+ER+NK+QGVN+YVKNLD+ + D+ +REAF+ YGTITSARVM D+ +G S+GFGFVCFS PEEA  A+ EMNGK++  KP+YVA AQR+EVRR QLEAQ AQR TG +  RG+PM    MY  P +      MP Q RQ YM PQ M+PRG  PR P      MP   G   + M  Y  P Q   Q QPRR                           Q  GPAGA  G     NFK+  G RN   ++  GN NM+         +P G    +                   E LT+AALAAA PE QKNMIGERLYPLIH  Q +LAGKITGMLLEMDN ELLHLLESP+AL +KI EA+QVL  HQ
Sbjct:   70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKA---LYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVM-------KDPNSATN-RGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPMGQPPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGVHPRVPFGFGGRMPGAPGPAGFSMAGYGMPMQQ--QRQPRR-------------------------GRQVPGPAGAPNGMPNRRNFKYTTGARNHPSREGLGN-NMSGGVMPQGSSTPMGGAPAL-------------------EPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAHQ 674          
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 597 bits (1538), Expect = 4.810e-204
Identity = 378/654 (57.80%), Postives = 443/654 (67.74%), Query Frame = 0
Query:   34 YHSASLYVGDLSKDVTETTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSLFGNILSCKV--ATDE--NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVHEGEDAKEKGSEGN-SRGFGFVNFEEHDSAVKAIEAFNGAEM--PDGEGVTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQPRRPAGPXXXXXXXXXXXXXXXXXXXXXXXQAQGPAGAGRGNFKFGPGVRNQQQPGN--PNMTSPXXXXXXXSPAGPQQPIPSPQRSFFVSSSQPAPSTNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALLAKINEALQVLSVHQAQEA 677
            +HSASLYVGDL+ DV+E  LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKA   LYDTFSLFGNILSCKV  A D+  + E +GYGYVHYET  +AN AIAKINGMLIAGK+V+VGHFV+R +RA  +DWTNLY+K +P  W + KL +EF K G +TS K  + + +  +E       + G+GFVN+ +H+SAVKA+EA NG ++  PDGE    +Y  RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +TD+ +RE F+ YGTITSARVM D+N G S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  G +PPRG+P+   GMY      GA P        Y MP      P   +P    RG   MPA                     XXXXXXXXXXXXXXXXXXX   A GP            G       G   P +           P     P+P                       AALAAA PE+QKNMIGERLYPLI   QP+LAGKITGMLLEMDNGELLHLLESPEAL  KI EAL VL  H AQ A
Sbjct:   12 FHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKA---LYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGEE-REMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSN-GNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMY------GAMP-------MYAMP------PGQGIPPQASRGYPMMPAMMX------------------XXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRPGA--MPVPXXXXXXXXXXXX----XXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQMA 617          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5727.13191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI0.000e+081.40Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA6.920e-24062.67Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A2D4BDJ5_PYTIN1.590e-21757.36Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A6G0WN78_9STRA2.210e-21360.12Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]
A0A6A3LR95_9STRA2.980e-21162.19Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
W4FQT6_9STRA5.950e-21157.08Polyadenylate-binding protein n=8 Tax=Aphanomyces ... [more]
M4B4S0_HYAAE2.410e-21061.73Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
A0A067BXY4_SAPPC2.000e-20659.14Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]
F0W707_9STRA2.180e-20656.02Polyadenylate-binding protein n=2 Tax=Albugo TaxID... [more]
A0A7S2V0G2_9STRA4.810e-20457.80Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324
NoneNo IPR availableGENE3D1.10.1900.10coord: 594..678
e-value: 3.3E-34
score: 118.7
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 33..674
NoneNo IPR availablePANTHERPTHR24012:SF409POLYADENYLATE-BINDING PROTEIN 1coord: 33..674
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 38..111
e-value: 4.6E-23
score: 92.6
coord: 126..201
e-value: 6.7E-16
score: 68.8
coord: 333..406
e-value: 2.4E-28
score: 110.2
coord: 217..299
e-value: 1.9E-17
score: 73.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 39..108
e-value: 2.6E-20
score: 72.0
coord: 218..291
e-value: 2.1E-13
score: 49.9
coord: 334..403
e-value: 1.5E-21
score: 76.0
coord: 127..199
e-value: 2.1E-14
score: 53.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 332..410
score: 19.928
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 125..205
score: 15.255
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 37..115
score: 16.927
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 216..303
score: 15.988
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinSMARTSM00517poly_2coord: 609..672
e-value: 4.8E-35
score: 132.4
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPFAMPF00658PABPcoord: 603..669
e-value: 2.8E-28
score: 97.9
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPROSITEPS51309PABCcoord: 597..674
score: 21.356
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 214..301
e-value: 3.8E-19
score: 70.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 6..125
e-value: 9.9E-26
score: 92.3
coord: 302..422
e-value: 4.1E-31
score: 109.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 126..213
e-value: 5.9E-19
score: 70.0
IPR006515Polyadenylate binding protein, human types 1, 2, 3, 4TIGRFAMTIGR01628TIGR01628coord: 37..669
e-value: 7.7E-214
score: 710.2
IPR036053PABC (PABP) domainSUPERFAMILY63570PABC (PABP) domaincoord: 542..676
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 36..208
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 214..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5727contigH-elongata_contig5727:3019..10050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5727.13191.1mRNA_H-elongata_contig5727.13191.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5727 3019..10050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5727.13191.1 ID=prot_H-elongata_contig5727.13191.1|Name=mRNA_H-elongata_contig5727.13191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=679bp
MALNVPSALSQPPAQGQQGQGNAVSGSQAIIASYHSASLYVGDLSKDVTE
TTLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNF
TTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKASTALYDTFSL
FGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHV
GHFVRRDNRAGQADWTNLYVKGLPGSWDDAKLREEFEKHGPITSCKVQVH
EGEDAKEKGSEGNSRGFGFVNFEEHDSAVKAIEAFNGAEMPDGEGVTTLY
CARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMRE
AFSPYGTITSARVMVDNNSGQSKGFGFVCFSAPEEATKAITEMNGKMLLN
KPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQ
PGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQMPGQPQP
RRPAGPRQQRGQPQPQTGRGGPQGRGMPPQAQGPAGAGRGNFKFGPGVRN
QQQPGNPNMTSPPPPQQQQSPAGPQQPIPSPQRSFFVSSSQPAPSTNESL
TAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLH
LLESPEALLAKINEALQVLSVHQAQEAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002004PABP_HYD
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006515PABP_1234
IPR036053PABP-dom
IPR035979RBD_domain_sf