prot_H-elongata_contig57222.13183.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57222.13183.1
Unique Nameprot_H-elongata_contig57222.13183.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 3.280e-73
Identity = 110/114 (96.49%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG++LSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERM+IAKQEL+AMLE
Sbjct:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS)

HSP 1 Score: 208 bits (529), Expect = 8.420e-67
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+I+SRVF++LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDS+D ERMS+AK EL AMLE
Sbjct:    1 MGIIMSRVFESLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.330e-66
Identity = 100/114 (87.72%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG++LS+VFQA+FGSKEVRILILGLDNAGKTTIL RLQNEA+++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ IAKQEL AMLE
Sbjct:    1 MGILLSKVFQAVFGSKEVRILILGLDNAGKTTILLRLQNEAEEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERLGIAKQELAAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S2DCF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCF0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.770e-66
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+I SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct:    1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.980e-66
Identity = 97/114 (85.09%), Postives = 110/114 (96.49%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+  SR+FQ +FGSKEVRILILGLDNAGKTTILYRLQNE+D++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct:   32 MGIFFSRIFQRIFGSKEVRILILGLDNAGKTTILYRLQNESDEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLNVAQQELQAMLE 145
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.350e-65
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+I SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct:    1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: F0YGB1_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGB1_AURAN)

HSP 1 Score: 204 bits (518), Expect = 3.730e-65
Identity = 99/115 (86.09%), Postives = 109/115 (94.78%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDN-IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG++ SRVFQALFGSKEVRILILGLDNAGKTTILY+LQNE DD  I TIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct:    1 MGILFSRVFQALFGSKEVRILILGLDNAGKTTILYKLQNETDDEEIMTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLAVARQELQAMLE 115
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.470e-65
Identity = 97/114 (85.09%), Postives = 107/114 (93.86%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG++ S+VF+ LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERM +AK EL AMLE
Sbjct:    1 MGILFSKVFETLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLE 114
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.150e-64
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+++SR+F++LFGSKEVRILILGLDNAGKTTILYRLQNE D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERMS+A+ EL AMLE
Sbjct:   54 MGILMSRLFESLFGSKEVRILILGLDNAGKTTILYRLQNEGDEVVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADIERMSVARGELTAMLE 167
[Close]
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK)

HSP 1 Score: 199 bits (505), Expect = 3.550e-63
Identity = 94/114 (82.46%), Postives = 107/114 (93.86%), Query Frame = 0 
Query:    1 MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELLAMLE 114
            MG+  S++F +LFGSKEVRILILGLDNAGKTTILYRLQN++D+ IQT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ +A+QEL AMLE
Sbjct:    1 MGIFFSQLFNSLFGSKEVRILILGLDNAGKTTILYRLQNDSDEVIQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERVHVARQELSAMLE 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57222.13183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D7_ECTSI3.280e-7396.49ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
B8CE86_THAPS8.420e-6788.60Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta... [more]
A0A836CD21_9STRA2.330e-6687.72ARL1, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]
A0A7S2DCF0_9STRA5.770e-6685.09Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U1B3M7_9STRA8.980e-6685.09Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2DEW5_9STRA1.350e-6585.09Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
F0YGB1_AURAN3.730e-6586.09Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A1E7FFD0_9STRA5.470e-6585.09Arl1-family small GTPase n=1 Tax=Fragilariopsis cy... [more]
A0A7S3DQ25_9STRA2.150e-6485.09Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A6S9DTD2_HETAK3.550e-6382.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 19..42
score: 60.05
coord: 76..101
score: 45.93
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..114
e-value: 3.2E-50
score: 170.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..114
e-value: 2.2E-24
score: 97.0
NoneNo IPR availableGENE3D3.40.50.300coord: 18..114
e-value: 2.8E-43
score: 149.4
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..114
NoneNo IPR availablePANTHERPTHR11711:SF326coord: 1..114
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..114
score: 15.317
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..97
e-value: 1.4E-16
score: 58.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57222contigH-elongata_contig57222:763..1883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57222.13183.1mRNA_H-elongata_contig57222.13183.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57222 763..1883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57222.13183.1 ID=prot_H-elongata_contig57222.13183.1|Name=mRNA_H-elongata_contig57222.13183.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MGLILSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPT
IGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRE
RMSIAKQELLAMLE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase