prot_H-elongata_contig57209.13178.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57209.13178.1
Unique Nameprot_H-elongata_contig57209.13178.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: D7FTG3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG3_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.120e-78
Identity = 133/203 (65.52%), Postives = 161/203 (79.31%), Query Frame = 0
Query:    1 QNIAQLLQQRRVGAIPASSGGRVSGGHTNARSTSAGMRGWDFLDPCSGSGGGKGLLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            QN+AQLL++RR G IPAS+GG V GG T+AR+TSA +RG   +    G+GG    +    +FGFRR++G+HPS+I+RLRHTATLRGH  CVNRLCWN+ GT IAS SDDTTVCLFDA++  R +QFQTGH RNIL V+ LPCTN Q++VTGAMD EVRLH APFS  EL  E F CH+ R++A+EVEPGNPF+FWSASEDGTV
Sbjct:   23 QNVAQLLRRRREGKIPASTGGGVLGGSTSARATSAALRGIRGVGGRVGAGG----VSMPRAFGFRRNLGQHPSMIQRLRHTATLRGHSGCVNRLCWNDAGTRIASGSDDTTVCLFDAASGKRDVQFQTGHRRNILSVKFLPCTNDQILVTGAMDGEVRLHKAPFSSPEL-TECFSCHDQRVHAVEVEPGNPFIFWSASEDGTV 220          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A485LQN6_9STRA (Aste57867_24505 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQN6_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.800e-30
Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   63 GFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            G +R +  H +++KRL   + L  HD CVNRLCWN++GTT+AS SDDT V L+D +T T +   +TGH+ NI GV  +P TN  ++ +G MD EVRLH  PF PE  ++     H  R+  +   PG P + WS +EDG V
Sbjct:   24 GPQRQLQAHAALVKRLVCDSVLNKHDGCVNRLCWNQSGTTLASGSDDTRVILWDYNTRTARHVIETGHSMNIFGVCFVPGTNDHIVASGGMDCEVRLHFGPFRPEGSKL--VATHRGRVKDVVSSPGVPKVIWSGAEDGLV 162          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S1HGD3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGD3_HEMAN)

HSP 1 Score: 119 bits (299), Expect = 7.530e-30
Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   66 RSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKM---QFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            +++  H ++  RL     L+ H+ CVNR+ WN TGT +ASVSDD   C++   +  +      F+TGH+RNI GVR LP T  + +VTGAMD EVR H    + + +   V+ CH +R+  +E+E GNP LFWSA EDG +
Sbjct:   40 QALQSHHALAVRLSLEKQLKEHEGCVNRISWNSTGTLLASVSDDCCCCVWSYGSYAQSQLSHSFETGHSRNIFGVRFLPETQDRQMVTGAMDCEVRHHTITDAGD-VHTRVYNCHANRVKDVEIEHGNPHLFWSAGEDGKI 179          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A8K1FIH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIH9_PYTOL)

HSP 1 Score: 121 bits (304), Expect = 2.070e-28
Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 0
Query:   71 HPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            H S+++RL   A L GH  CVN L WN  G+ +AS SDDT + L+D +T  ++   +TGH  NI  V  +P TN  ++ TGAMDK+VR+H APF PE    + F+ H+ R+  I   PG P LFWS +EDG V
Sbjct:   46 HGSLLRRLVPEAVLTGHTGCVNHLRWNRNGSLLASGSDDTNLILWDYATKQQRHVIETGHLLNIFAVCFVPETNDHILATGAMDKDVRIHYAPFRPE--ATKRFRLHKGRVKDIASSPGAPKLFWSVAEDGLV 176          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: M2XUM7_GALSU (WD and tetratricopeptide repeats protein 1 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUM7_GALSU)

HSP 1 Score: 120 bits (301), Expect = 5.060e-28
Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 0
Query:   71 HPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            H S  ++L + ATL+GH  CVNRL +NE G+ + S SDD  + ++D +  T + Q +TGH RNI GVR +PCTN +L+ +GAMD  VR+      PE+L    F+ HE R+  I+VE  NP L +SASEDG V
Sbjct:   35 HSSFFQKLENIATLKGHSGCVNRLSFNEEGSLLLSGSDDCRLLVWDVAEGTLRDQVETGHDRNIFGVRFIPCTNDRLLASGAMDCTVRVSSLDGRPEKL----FEVHEDRVKTIDVERRNPNLIFSASEDGRV 163          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S0E4J1_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E4J1_9CRYP)

HSP 1 Score: 119 bits (299), Expect = 1.000e-27
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 0
Query:   54 GLLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEE-LQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            G +RG     FR S+  H ++I +L     LRGH  CVNRLCWN+TGT +ASVSDD    L+D +  T  ++  TGH RNI GV  +P +N   IVTGAMD +VRLH    SP+     E++  H  R+  ++     P LFWSA+EDGT+
Sbjct:   15 GYMRGRR---FRGSLLGHRALIDKLTLDQELRGHTGCVNRLCWNDTGTKLASVSDDCKCILWDVNRHTH-VEISTGHERNIFGVAFIPESNDSWIVTGAMDYQVRLHKV--SPDGGYNCELYSHHRDRVKDVKTTSQEPNLFWSAAEDGTL 159          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: L1JDY1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JDY1_GUITC)

HSP 1 Score: 117 bits (293), Expect = 6.340e-27
Identity = 65/141 (46.10%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   64 FRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPE-ELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            FR S+  H S++ +L     LRGH  CVNRLCWNETGT +ASVSDD    ++D +  +  ++  T H RNI GV  +P  N   IVTGAMD +VRLH    SP+ + + E+F  H  R+  ++     P LFWSA+EDGT+
Sbjct:    6 FRNSLLGHKSLVDKLTLHKELRGHAGCVNRLCWNETGTKLASVSDDCKCIIWDVNRNSH-LEISTEHERNIFGVAFIPERNDSWIVTGAMDFQVRLHK--ISPDGDCKGELFSYHTDRVKDVKTISQEPNLFWSAAEDGTI 143          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A2D4CB75_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CB75_PYTIN)

HSP 1 Score: 115 bits (288), Expect = 3.000e-26
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   64 FRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            F  ++  H ++++RL   ATL  H  CVN L WNE GT +AS SDDT + L+D +T   +    TGH  NI  V  +P T   ++ TGAMDK+VR+H APF  +    + F+ H  R+  I   PG P +FWS  EDG V
Sbjct:   51 FNATLQSHGALLRRLAVDATLESHRGCVNHLRWNEQGTLLASGSDDTRLILWDYATHRVRADIATGHVLNIFAVCFVPGTQDHILATGAMDKDVRIHYAPFRRD--STKRFRFHRGRVKDIASSPGVPRVFWSVGEDGVV 188          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A1V9Z7T1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7T1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.080e-25
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   55 LLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            +LR       +R +  H ++++RL   A L+ HD CVNRLCWN+ GT +AS SDDT V L+D      +    TGH+ NI GV  +P TN  ++ +  MD EVRLH APF  +  +      H  R+  +   P  P +FWSA EDG V
Sbjct:  242 VLRSVEPLDPQRLIQGHGALVRRLVCDAVLQTHDGCVNRLCWNQQGTILASGSDDTRVVLWDYQRRKPRHVITTGHSMNIFGVAFVPGTNDHIVASAGMDCEVRLHYAPFRLDGSKF--LASHRGRVKDLATSPMVPHVFWSAGEDGVV 388          
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Match: A0A7S3FNU4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNU4_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 1.700e-25
Identity = 68/157 (43.31%), Postives = 85/157 (54.14%), Query Frame = 0
Query:   55 LLRGSSSFGFR-----RSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETGTTIASVSDDTTVCLFDASTATRK-MQFQTGHTRNILGVRILPCTNGQLIVTGAMDKEVRLHMAPFSPEELQVEV--FKCHESRINAIEVEPGNPFLFWSASEDGTV 203
            + RG  S G R     RS+ E   ++++      L+GH  CVNRLCWNE GT +AS SDDT V L+      R  +   T H  NI GV+ LP +    +VTGAMD EV+LH       E  V       H +R+ A+EVE GNP  FWS SEDG V
Sbjct:   15 VTRGRESLGLRQPTSTRSLAE--CLLRKTDSPTVLKGHRGCVNRLCWNEQGTLLASGSDDTRVILWSYPEWRRPAIVVPTNHKANIFGVKFLPLSGDAKLVTGAMDCEVQLHHLERVSREHNVHTTTLDFHHNRVKAVEVEQGNPHNFWSGSEDGNV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57209.13178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTG3_ECTSI1.120e-7865.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485LQN6_9STRA1.800e-3045.39Aste57867_24505 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1HGD3_HEMAN7.530e-3043.26Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8K1FIH9_PYTOL2.070e-2846.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M2XUM7_GALSU5.060e-2847.37WD and tetratricopeptide repeats protein 1 isoform... [more]
A0A7S0E4J1_9CRYP1.000e-2745.70Hypothetical protein n=2 Tax=Hanusia phi TaxID=303... [more]
L1JDY1_GUITC6.340e-2746.10Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A2D4CB75_PYTIN3.000e-2642.86Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9Z7T1_9STRA1.080e-2540.94Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S3FNU4_9CHLO1.700e-2543.31Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 77..116
e-value: 5.4E-7
score: 39.2
coord: 167..202
e-value: 35.0
score: 7.3
coord: 119..161
e-value: 0.59
score: 18.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 172..203
e-value: 0.16
score: 12.9
coord: 81..116
e-value: 3.1E-5
score: 24.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 84..125
score: 10.041
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 66..203
e-value: 1.3E-23
score: 85.3
NoneNo IPR availablePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 61..203
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 84..203
score: 14.661
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 76..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57209contigH-elongata_contig57209:1180..3593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57209.13178.1mRNA_H-elongata_contig57209.13178.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57209 1180..3593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57209.13178.1 ID=prot_H-elongata_contig57209.13178.1|Name=mRNA_H-elongata_contig57209.13178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
QNIAQLLQQRRVGAIPASSGGRVSGGHTNARSTSAGMRGWDFLDPCSGSG
GGKGLLRGSSSFGFRRSVGEHPSIIKRLRHTATLRGHDQCVNRLCWNETG
TTIASVSDDTTVCLFDASTATRKMQFQTGHTRNILGVRILPCTNGQLIVT
GAMDKEVRLHMAPFSPEELQVEVFKCHESRINAIEVEPGNPFLFWSASED
GTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf