prot_H-elongata_contig5719.13175.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5719.13175.1
Unique Nameprot_H-elongata_contig5719.13175.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7G0A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A6_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.100e-59
Identity = 114/235 (48.51%), Postives = 149/235 (63.40%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSK---------GGEV-------KIENLEAAPVWERDPS-VPETPVDISSRYFNRNVANDSIDESMIIPPSY-----LKSWAAGAGSDSLS 213
            MRRLLLTG+LVF+  DT GQVA+ C+FAF+SLL FE LRPH+D LD  LYRTGCLVIFFTNFLALMIKA V   DS    +YS+ LIIVN+ F LSI+W+TW   KA  SRRHVQ +V+GVDI+ E  +D ++       ++  + K         G  V       K+E+LEAAP WE DP   P++P+DISSR +  N    S+  ++ IP +      + +  +G G  S++
Sbjct:    1 MRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFERLRPHIDHLDMELYRTGCLVIFFTNFLALMIKANVASPDSRGCKVYSIVLIIVNVLFFLSIFWDTWAAAKASSSRRHVQDMVLGVDIVNEKQLDKIIGPKNTNVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPIDISSRVYALNPRGHSLASTVAIPSTVWGAPSINASPSGTGGSSVA 235          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.150e-59
Identity = 119/235 (50.64%), Postives = 155/235 (65.96%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSK---------GGEV-------KIENLEAAPVWERDPS-VPETPVDISSRYFNRNVANDSIDESMIIPPSY-----LKSWAAGAGSDSLS 213
            MRRLLLTG+LVFL  DT GQVA+ C+FAF+SLL FELLRPH D LD  LYRTGCLVIFFTNFLALMIKA V   DS  + +YSV LIIVN+ F LSI+WNTW   KA  SRRHVQ +++GVDI+ E  +D ++     K ++  + K         G  V       K+E+LEAAP WE DP   P++PVDISSR+F+R+    S+  ++ +P ++     + +  +G G  S++
Sbjct: 1551 MRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRHVQDMMLGVDIVNEKQLDKIIGPKNTKVKKTNQQKLDDALGPDDGAGVDKAVEDGKMEDLEAAPAWEADPDDPPDSPVDISSRFFSRDPGGHSVASTVAVPSTFWGAPSINASPSGTGGPSVA 1785          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.620e-57
Identity = 116/235 (49.36%), Postives = 154/235 (65.53%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEV----------------KIENLEAAPVWERDPS-VPETPVDISSRYFNRNVANDSIDESMIIPPSY-----LKSWAAGAGSDSLS 213
            MRRLLLTG+LVF+  DT GQVA+ C+FAF+SLL FELLRPH D LD  LYRTGCLVIFFTNFLALMIKA V + DS  + +YSV LIIVN+ F LSI+WNTW   KA  SRRH   +++GVDI+ E  +D ++   K K ++ ++ K  +                 K+E+LEAAP+WE DP   P++PVDISSR F R+    S+  ++ IP ++     + +  +GAG   ++
Sbjct: 1757 MRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSVVLIIVNVLFFLSIFWNTWAAAKASFSRRH--DMMLGVDIVNEKQLDKIIGPKKAKAKKTKQQKLDDALGPDDGAGIDKAVEDGKLEDLEAAPIWEADPDDPPDSPVDISSRVFARDPVGHSVASTVAIPSNFRGAPSINASPSGAGGPGVA 1989          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 2.270e-47
Identity = 89/163 (54.60%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEVKIENLEAAPVWE 163
            +RRLLLTG+LVFL  DT GQVA+SC+FA +SL+ FELLRPH++ +DR LYRTGCLVI FTNFLAL+IK+   D+DS+ +  YSV L+IVNI F LSIW+N   T KA+ SR H Q +++GVDI++E+ ++ V+   K K +    + GG+ K E+ E  P W+
Sbjct: 1562 IRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKEPHGTAGGDAKTEDREERPSWD 1724          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 3.540e-46
Identity = 89/163 (54.60%), Postives = 119/163 (73.01%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEVKIENLEAAPVWE 163
            +RRLLLTG+LVFL  DT GQVA+SC+FA +SL+ FELLRPH++ LDR LYRTGCLVI FTNFLAL+IK+   D+DS+ +  YSV L+IVNI F LSIW+N   T KA+ SR H Q +++GVDI++E+ ++ V+   K K +    +  G+ K E+ E  P W+
Sbjct: 1287 IRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACTTAKAMFSRSHAQDMLLGVDIVDESTINQVLGPEKRKTKEPSGTACGDAKTEDGEERPFWD 1449          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 3.570e-46
Identity = 88/163 (53.99%), Postives = 118/163 (72.39%), Query Frame = 0
Query:    1 MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEVKIENLEAAPVWE 163
            +RRLLLTG+LVFL  DT GQVA+SC+FA +SL+ FELLRPH++ LDR LYRTGCLVI FTNFLAL+IK+   D+DS+ +  YSV L+IVNI F LSIW+N   T KA+ SR H Q +++GVD+++E+ ++ V+     K   +    GG+ K E+ E  P W+
Sbjct: 1329 IRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSVALVIVNIMFFLSIWFNACATTKAMFSRSHAQDMLLGVDVVDESTINKVLGPEMRKTDESMGKTGGDAKTEDGEERPFWD 1491          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.890e-46
Identity = 106/234 (45.30%), Postives = 142/234 (60.68%), Query Frame = 0
Query:    2 RRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEV----------------KIENLEAAPVWERDPS-VPETPVDISSRYFNRNVANDSIDESMIIPPSYLKSWA-----AGAGSDSLS 213
            RRLLLTG+LVFL  DT GQVA+ C+FAF+SLL FELLRPH D LD  LYRTGCLVIF TN LA      V    S S  +YS+ LIIVN+ FVLSI+ NTW   KA  SRRH   +V+GVDI+ E  +D ++   K K ++  + K  +                 K+E+L+A P WE DP   P++P+DISSR + R+    S+  ++ IP ++  + +     +GAG  S++
Sbjct:  491 RRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRTGCLVIFLTNSLA-----NVASPCSRSCEVYSIVLIIVNVLFVLSIFGNTWAAAKASFSRRH--DMVLGVDIVNEKELDKIIGPKKTKAKKTNQQKLDDALAPDDGAGFAKTVEDGKMEDLKATPAWEADPDGPPDSPIDISSRMYARDPRGHSVASTVAIPSTFWGTTSFDASPSGAGGPSVA 717          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7G0A7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A7_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.810e-31
Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 0
Query:   53 GCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGEV----------------KIENLEAAPVWERDPS-VPETPVDISSR 178
            GCLVIFFTNFLALMIKA V   DS    +YSV LIIVN+ F LSI+WNT    KA  SRRHVQ +V+GVDI+ E  +D ++   K K ++ ++ K  +                 K+E+LEAAP WE DP   P++P+DISSR
Sbjct:   18 GCLVIFFTNFLALMIKANVASPDSRGCEVYSVVLIIVNVLFFLSIFWNTLAAAKASFSRRHVQDMVLGVDIVNEKQLDKIIGPKKTKVKKTKQQKLDDALGPDDGAGFAKAVEDGKMEDLEAAPAWEVDPDDPPDSPIDISSR 160          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.940e-22
Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    2 RRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTW 102
            RR+LLTGVL+F  A T+ Q A +C+FAF+SLLGFELLRPH+D  D  LYR GC++IF +NFLAL+IK +   +  N A L  + LI VN+F +L++   +W
Sbjct: 1047 RRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAAGEG-NRAALGGI-LIAVNVFLILAVLSTSW 1145          
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.020e-22
Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    2 RRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLYRTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWNTW 102
            RR+LLTGVL+F  A T+ Q A +C+FAF+SLLGFELLRPH+D  D  LYR GC++IF +NFLAL+IK +   +  N A L  + LI VN+F +L++   +W
Sbjct: 1389 RRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAAGEG-NRAALGGI-LIAVNVFLILAVLSTSW 1487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5719.13175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A6_ECTSI1.100e-5948.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0B0_ECTSI1.150e-5950.64Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JRA9_9PHAE1.620e-5749.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4A5_9PHAE2.270e-4754.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXY9_ECTSI3.540e-4654.60Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G119_ECTSI3.570e-4653.99Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5JI42_9PHAE4.890e-4645.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0A7_ECTSI1.810e-3149.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRH1_ECTSI1.940e-2253.47Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JS31_9PHAE2.020e-2253.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availableTMHMMTMhelixcoord: 48..67
NoneNo IPR availableTMHMMTMhelixcoord: 21..38
NoneNo IPR availableTMHMMTMhelixcoord: 80..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5719contigH-elongata_contig5719:8155..10945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5719.13175.1mRNA_H-elongata_contig5719.13175.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5719 6130..10959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5719.13175.1 ID=prot_H-elongata_contig5719.13175.1|Name=mRNA_H-elongata_contig5719.13175.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MRRLLLTGVLVFLGADTSGQVAYSCLFAFISLLGFELLRPHMDRLDRMLY
RTGCLVIFFTNFLALMIKAEVTDQDSNSATLYSVGLIIVNIFFVLSIWWN
TWVTIKAILSRRHVQGVVIGVDIIEENNMDAVMTAMKEKKRRARKSKGGE
VKIENLEAAPVWERDPSVPETPVDISSRYFNRNVANDSIDESMIIPPSYL
KSWAAGAGSDSLSVSEPHIRQHPLRGYHGASSAWTANFHEPTAAAPTANI
VFDGGPRSRGFPYSLAGVVTKPSGLKSSQSPAVAGPKKSDLDD*
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