prot_H-elongata_contig57174.13174.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57174.13174.1
Unique Nameprot_H-elongata_contig57174.13174.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: D7FS78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS78_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.740e-43
Identity = 92/198 (46.46%), Postives = 112/198 (56.57%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAESRRLQLSNDGL--RHWRVEDGERGRWFAGQPGCWLTSCLSCDKRPHCSLNARESSGSNSNIDCYTTFGDLAIFEQVEVGTMPSTPN 196
            MAGL G VISG+QT  LE++ ++EVEWT S+VLFT  Y+LSL+ LYSWTS FLQ GDAAMFNLSLLTSDVYAL+F+  +EHA P+W+YF  F VIF GLV+YH QP PT AE        DG     W  E  + G    G    +              +  RE SG ++      TF    +     V   P   N
Sbjct:  242 MAGLFGTVISGVQTLALEKQLLAEVEWTRSVVLFTFGYALSLSVLYSWTSLFLQAGDAAMFNLSLLTSDVYALLFSVLVEHATPHWLYFVAFVVIFCGLVVYHGQPPPTCAEPLPRLALVDGTPGSSWSREGDDCGGHKRGTGRAFF------------GMQRRECSGESAGTSSTATFCSSELSPGASVSPSPPAKN 427          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A7S0ZXT3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZXT3_NOCSC)

HSP 1 Score: 100 bits (248), Expect = 1.300e-21
Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    3 GLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAESRRL 116
            G+ G V+S +Q    ER  + EV W  S V+    + L L G+Y  TS FL   DAA+FNLSLLTSD+Y++ +A+ + H  P W+Y A F     GL++YH+QP P LA++ R+
Sbjct:  209 GVLGTVLSTVQALSTERLRLEEVTWNASKVVHMLGFQLCLFGMYLLTSLFLSVADAALFNLSLLTSDIYSVAWAWAVMHHRPTWLYGAAFATTVSGLIVYHTQPSPVLADNLRI 322          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: K3W9Z4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Z4_GLOUD)

HSP 1 Score: 99.8 bits (247), Expect = 1.430e-21
Identity = 50/109 (45.87%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPT 109
            M GLCGFVIS LQ    E + + E++WT   VL    Y  +L  +Y+ TS FL+ GDAA+FNLSLLTSD +A++ A ++ +   +W+YF GF +I  GL++Y+    PT
Sbjct:  196 MIGLCGFVISSLQAVAFEGDVLREIQWTTPSVLCLLGYIGTLFLMYTCTSVFLKDGDAAVFNLSLLTSDFFAVVAAKYLFNEELSWLYFVGFSMIIAGLLIYNRSDAPT 304          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A8K1CBH7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBH7_PYTOL)

HSP 1 Score: 99.8 bits (247), Expect = 1.620e-21
Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAESRRLQ 117
            M GLCGFVIS +Q +  E   I+  +W+   VL    Y ++L  +YS+TS F++ GDAA+FNLSLLTSD +A++ A F+ +   + +YF GF +I +G+V+Y+  P PT +   +++
Sbjct:  206 MVGLCGFVISSIQAYLFEGAVIAHADWSSGSVLCLLGYVVTLFVMYSFTSVFMKTGDAAVFNLSLLTSDFFAVVAARFLFNEHLSSLYFVGFTMIVIGIVIYNRSPPPTTSLDDKME 322          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A7R9U7Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.680e-21
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    6 GFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAES 113
            G ++S LQ   LE    S V WTP++ +F   +++++  LYS  SFFL   D+A+FNLSLLTSD YA++F  F+ H+    +YF  FGV  +GL +YHS+P P   ES
Sbjct:  207 GVLLSLLQAGALEGSQWSSVPWTPAVAMFFLGFAVTMFTLYSLVSFFLGMADSALFNLSLLTSDAYAVLFTLFVLHSAVTLLYFVAFGVTCIGLFIYHSEPPPAPRES 314          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A7S1ANB1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ANB1_NOCSC)

HSP 1 Score: 97.4 bits (241), Expect = 1.410e-20
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    3 GLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAES 113
            G+ G ++S LQ   LE   + +V WT  +VL    + + L G+Y  TS FL   DAA+FNLSLLTSD+Y++ +A+ ++H  P+W+Y A F     GL +YH+QP P LAES
Sbjct:  210 GVFGTLLSVLQACSLEWTFLVDVTWTSPMVLHMFGFQMCLFGMYVLTSLFLSVADAALFNLSLLTSDIYSVAWAWAVQHEQPHWLYGAAFVTTMSGLAVYHTQPPPFLAES 320          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A7S1RHJ1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RHJ1_ALECA)

HSP 1 Score: 97.1 bits (240), Expect = 1.820e-20
Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQP 106
            M GL G + S LQ   LER A+ E  W+   +L+   + L L G+Y +TS FL   DAA+FNLSLLTSD+Y++IF++ ++H    W+Y A F     GLVLYH+QP
Sbjct:  217 MLGLWGTLFSCLQAVVLERSALMECNWSTENMLWLLGFQLCLFGMYVFTSNFLMRADAALFNLSLLTSDLYSVIFSWRVQHGTVTWMYSAAFITTLSGLVLYHTQP 322          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A7S0FB94_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FB94_9DINO)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-19
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPV---PTLAESRRLQLSNDGLRHWRVED 130
            M G  G ++S +Q   LEREA++   WT   +L    + L L G+Y  TS FL   DAA+FNLSLLTSD+Y+ +F++ ++H    W+Y A F     GLVLYH+QP    P     R  Q    GL   R+ D
Sbjct:  100 MLGFWGTLLSCVQAALLEREALARSAWTSRSLLCLLGFQLCLFGVYVLTSVFLLHADAALFNLSLLTSDLYSALFSWRVQHGTVTWMYCAAFITTLSGLVLYHTQPAVAGPQPPTDRARQGREPGLLAARLVD 232          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A5D6XWS6_9STRA (Homeobox domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWS6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.590e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    1 MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVP 108
            M GLCGF IS +Q   LE  A+  +EWT S  L    Y  +L  +Y+ TS FLQ  DAA+FNLSLLTSD +A++ A ++     +W+YF GF +I  G+++Y++   P
Sbjct:  492 MLGLCGFAISAVQGAVLEGRALQAIEWTVSSALCLVGYVCTLFLMYTCTSIFLQDADAAVFNLSLLTSDFFAVVAATYLFAEELSWVYFVGFALIIAGVLVYNNALAP 599          
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Match: A0A813L3L8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813L3L8_POLGL)

HSP 1 Score: 86.7 bits (213), Expect = 8.400e-19
Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   38 YSLSLTGLYSWTSFFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLVLYHSQPVPTLAESRRLQLSNDGL 123
            + L L G+Y  TS FL   DAA+FNLSLLTSDVY+++F++ ++H    W Y A F     GLVLYH+QP  T A S    L  DGL
Sbjct:    1 FQLCLFGMYVLTSVFLVSADAALFNLSLLTSDVYSVLFSYIVQHQRFGWTYAAAFATTLTGLVLYHTQPAVTCAASVATALGGDGL 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57174.13174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS78_ECTSI1.740e-4346.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0ZXT3_NOCSC1.300e-2143.86Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
K3W9Z4_GLOUD1.430e-2145.87Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CBH7_PYTOL1.620e-2141.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U7Z4_9STRA6.680e-2145.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1ANB1_NOCSC1.410e-2045.05Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1RHJ1_ALECA1.820e-2047.17Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S0FB94_9DINO1.150e-1941.35Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A5D6XWS6_9STRA4.590e-1944.44Homeobox domain-containing protein n=1 Tax=Pythium... [more]
A0A813L3L8_POLGL8.400e-1950.00Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009262Solute carrier family 35 member SLC35F1/F2/F6PFAMPF06027SLC35Fcoord: 1..104
e-value: 1.5E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR14233DUF914-RELATEDcoord: 1..120
NoneNo IPR availablePANTHERPTHR14233:SF4ANTHOCYANIN-RELATED MEMBRANE PROTEIN 2-RELATEDcoord: 1..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 86..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57174contigH-elongata_contig57174:1333..2494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57174.13174.1mRNA_H-elongata_contig57174.13174.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57174 1333..2510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57174.13174.1 ID=prot_H-elongata_contig57174.13174.1|Name=mRNA_H-elongata_contig57174.13174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
MAGLCGFVISGLQTFYLEREAISEVEWTPSIVLFTAMYSLSLTGLYSWTS
FFLQGGDAAMFNLSLLTSDVYALIFAFFIEHAGPNWIYFAGFGVIFVGLV
LYHSQPVPTLAESRRLQLSNDGLRHWRVEDGERGRWFAGQPGCWLTSCLS
CDKRPHCSLNARESSGSNSNIDCYTTFGDLAIFEQVEVGTMPSTPNRECP
C*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009262SLC35_F1/F2/F6