prot_H-elongata_contig56939.13147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56939.13147.1
Unique Nameprot_H-elongata_contig56939.13147.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length428
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56939.13147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 41..271
e-value: 5.2E-6
score: 27.1
IPR008615FNIPPFAMPF05725FNIPcoord: 165..208
e-value: 2.0E-7
score: 31.1
coord: 121..162
e-value: 7.1E-6
score: 26.1
coord: 231..272
e-value: 5.7E-7
score: 29.6
coord: 319..362
e-value: 1.8E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 69..235
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 153..409
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 69..235
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 153..409
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..427
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 51..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56939contigH-elongata_contig56939:867..2150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56939.13147.1mRNA_H-elongata_contig56939.13147.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56939 773..3117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56939.13147.1 ID=prot_H-elongata_contig56939.13147.1|Name=mRNA_H-elongata_contig56939.13147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=428bp
MELVSLTICAACRESVFPCVRADSLLLHRLVRARDSRSRVPPLRAHSVIW
GHCSLDSLSLPIMLLVGMRCLTFSGDFNHSVDRIAWPPSIEELNLGGRFN
QPIHRVEWPPRLRKLVLSEFFNQPIEGVMWSASLQTLTFKREFDRPIAKA
VWPASLQELTLGMLFNQPLIGSVWPATLKRLTFGMLFNQSIIRVVWPESL
QKLYFGAFDSESLVGGKWPAILRRLSSYSSFNQPIVGVIWPKFLQQLSFG
KSFDQPIVAVAWPESLQEISFGPCFEQPIIGVAWPASLRRLSFGKYFNES
IDGVEWPASLRILSFGSEFNRSIAGVRWPTSLQQLSFGSRFNKPITGVAW
PDSLQELSFGNDPTFYSEGELLPDSLQGLMFGATMGETFNRRRLANIVWP
AALKRLSIEGEDITLENSEHGGIRARV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP