prot_H-elongata_contig56906.13143.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56906.13143.1
Unique Nameprot_H-elongata_contig56906.13143.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: D8LPM6_ECTSI (Dus domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM6_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 7.480e-69
Identity = 113/128 (88.28%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    6 VLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTC-GLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIVG 132
            V  GTLPFRALAL YGADTVFTEEV+DRRV++AVRTENPVLGTVDYVE RGKKG A PFQTC  LER R+VYQIGTGDA NALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQP+VAADIVG
Sbjct:   21 VRAGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPQVAADIVG 148          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A6H5KTF8_9PHAE (Dus domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF8_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 1.170e-68
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    6 VLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTC-GLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIVG 132
            V  GTLPFRALAL YGADTVFTEEV+DRRV++AVRTENPVLGTVDYVE RGKKG A PFQTC  LER R+VYQIGTGDA NALRAAQHVERDVAAVDINMGCPK+FSLQGGMGAALLKQP+VAADIVG
Sbjct:   21 VRAGTLPFRALALRYGADTVFTEEVIDRRVVNAVRTENPVLGTVDYVEKRGKKGIATPFQTCPALERGRLVYQIGTGDATNALRAAQHVERDVAAVDINMGCPKKFSLQGGMGAALLKQPQVAADIVG 148          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A836CC64_9STRA (Dus domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC64_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.050e-45
Identity = 80/131 (61.07%), Postives = 94/131 (71.76%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  G+LP R LAL YGADTV+ EE+VDRRV  AVR  N  LGT+DYV      G ++ F+TC  ER RVV+Q+GT DA  A  AA+ V RDVAAVD+NMGCPKRFS+QGGMGAALL  P+VA DI+
Sbjct:    6 CLAPMVRAGSLPLRLLALQYGADTVWGEELVDRRVSAAVRHVNHHLGTIDYVN----NGKSVAFRTCDAERGRVVFQLGTSDAARARAAAEAVARDVAAVDVNMGCPKRFSIQGGMGAALLTNPDVACDII 132          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A8K1FAM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FAM1_PYTOL)

HSP 1 Score: 159 bits (402), Expect = 2.240e-44
Identity = 75/131 (57.25%), Postives = 97/131 (74.05%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE++D+R+I   R EN VL TVDYV    K G ++ F+TC  E+ +VV+QIGT D + AL+AA+HV +DVA++DINMGCPK FS+QGGMG AL+K+P+VA DIV
Sbjct:   10 CLAPMVRAGTLPLRLLSLRYGADLVYGEEIIDKRIIATTRVENAVLNTVDYVS---KNGDSVVFRTCAEEKGKVVFQIGTADPILALKAAEHVAQDVASIDINMGCPKHFSIQGGMGVALMKKPDVACDIV 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A3R7JYU6_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JYU6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.420e-44
Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE+VD+R+I AVR  N VL TVD+V    + G ++ F+TC  E  +VV+QIGT DAV AL+AA+ V RDVAAVDINMGCPK FS+QGGMGAALL++PEVA DI+
Sbjct:   10 CLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNAVLDTVDFVS---RNGDSVVFRTCPEETGKVVFQIGTADAVLALKAAEQVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDII 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A5D6YC71_9STRA (Dus domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC71_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.920e-44
Identity = 80/131 (61.07%), Postives = 95/131 (72.52%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE+VD+R+I   R  N +L TVDYV    K G A+ F+TC  E+ +VV+QIGT DAV AL+AA+ V  DVAAVDINMGCPK FS+QGGMGAALLK PEVA DI+
Sbjct:   10 CLAPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIIATNRVPNALLDTVDYVS---KNGGAVVFRTCEEEKRKVVFQIGTADAVLALKAAETVAGDVAAVDINMGCPKHFSIQGGMGAALLKTPEVACDIL 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: H3GYM5_PHYRM (U1-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYM5_PHYRM)

HSP 1 Score: 157 bits (398), Expect = 2.400e-43
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE+VD+R+I AVR +N V+ +VD+V    + G ++ F+TC  E  +VV+QIGT DAV AL+AA+ V RDVAAVDINMGCPK FS+QGGMGAALL++PEVA DI+
Sbjct:   10 CLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRMKNEVINSVDFVS---RNGDSVVFRTCPEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDII 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A6A3TA19_9STRA (U1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TA19_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.440e-43
Identity = 78/131 (59.54%), Postives = 97/131 (74.05%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE+VD+R+I AVR  N V+  VD+V    + G ++ F+TC  E  +VV+QIGT DAV AL+AA+ V RDVAAVDINMGCPK FS+QGGMGAALL++PEVA DI+
Sbjct:   10 CLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVPNEVVNAVDFVS---RNGDSVVFRTCAEEAGKVVFQIGTADAVLALKAAEAVARDVAAVDINMGCPKHFSIQGGMGAALLRKPEVACDII 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A484DW69_BRELC (U1-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW69_BRELC)

HSP 1 Score: 157 bits (396), Expect = 2.850e-43
Identity = 76/131 (58.02%), Postives = 98/131 (74.81%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE+VD+R+I AVR  N V+ TVD+V    + G ++ F+TC  E  +V++QIGT DAV AL+AA+ V RDV+A+DINMGCPK FS+QGGMGAALL++PEVA DI+
Sbjct:   10 CLSPMVRSGTLPLRLLSLRYGADLVYGEEIVDKRIISAVRVRNDVINTVDFVS---RSGDSVVFRTCPEESSKVIFQIGTADAVLALKAAEAVARDVSAIDINMGCPKHFSIQGGMGAALLQKPEVACDIM 137          
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Match: A0A2D4CCN5_PYTIN (tRNA-dihydrouridine synthase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCN5_PYTIN)

HSP 1 Score: 159 bits (403), Expect = 4.770e-43
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    1 CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVDYVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAVDINMGCPKRFSLQGGMGAALLKQPEVAADIV 131
            C    V  GTLP R L+L YGAD V+ EE++D+R+I   R EN VL T+DYV    K G ++ F+TC  ER +VV+QIGT D   ALRAAQHV RDVAA+D+NMGCPK FS+QGGMGAALL++ +VA DI+
Sbjct:   10 CLAPMVRAGTLPLRLLSLRYGADLVYGEEIIDKRIIATTRVENAVLNTIDYVS---KNGDSVVFRTCAEERGKVVFQIGTADPQLALRAAQHVARDVAAIDVNMGCPKHFSIQGGMGAALLQKRDVAVDII 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56906.13143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM6_ECTSI7.480e-6988.28Dus domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KTF8_9PHAE1.170e-6887.50Dus domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CC64_9STRA3.050e-4561.07Dus domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A8K1FAM1_PYTOL2.240e-4457.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7JYU6_9STRA3.420e-4461.07U1-type domain-containing protein n=3 Tax=Phytopht... [more]
A0A5D6YC71_9STRA7.920e-4461.07Dus domain-containing protein (Fragment) n=1 Tax=P... [more]
H3GYM5_PHYRM2.400e-4359.54U1-type domain-containing protein n=1 Tax=Phytopht... [more]
A0A6A3TA19_9STRA2.440e-4359.54U1-type domain-containing protein n=2 Tax=Phytopht... [more]
A0A484DW69_BRELC2.850e-4358.02U1-type domain-containing protein n=1 Tax=Bremia l... [more]
A0A2D4CCN5_PYTIN4.770e-4358.78tRNA-dihydrouridine synthase, putative n=1 Tax=Pyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 3..132
e-value: 7.4E-25
score: 89.4
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 11..131
e-value: 6.1E-15
score: 55.1
NoneNo IPR availablePANTHERPTHR45936FAMILY NOT NAMEDcoord: 8..131
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 9..131
IPR018517tRNA-dihydrouridine synthase, conserved sitePROSITEPS01136UPF0034coord: 100..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56906contigH-elongata_contig56906:670..1449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56906.13143.1mRNA_H-elongata_contig56906.13143.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56906 670..1449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56906.13143.1 ID=prot_H-elongata_contig56906.13143.1|Name=mRNA_H-elongata_contig56906.13143.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
CTPLYVLQGTLPFRALALHYGADTVFTEEVVDRRVIHAVRTENPVLGTVD
YVEPRGKKGTAIPFQTCGLERDRVVYQIGTGDAVNALRAAQHVERDVAAV
DINMGCPKRFSLQGGMGAALLKQPEVAADIVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
IPR018517tRNA_hU_synthase_CS