prot_H-elongata_contig5684.13136.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5684.13136.1
Unique Nameprot_H-elongata_contig5684.13136.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length402
Homology
BLAST of mRNA_H-elongata_contig5684.13136.1 vs. uniprot
Match: A0A6H5JY66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY66_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 1.380e-130
Identity = 214/344 (62.21%), Postives = 254/344 (73.84%), Query Frame = 0
Query:    2 VTGDYAGNYSANGTYRGKLDFFSDDGQFNLYFELA-ADRRMLQEAGLD------VLPGDVMVSALGG---GVGASRNLALCSTGYWIIAAITGDGYPVFGVPDCAENPADIRGNPWLVTSCETCGVEEAPSFVAPTVTCAESGSAQAIGSTTSPAPASPATCQTVYVTGPAAGVYAQEGTYANRGDFFSNNRAWNMYWVFYAGKPVNRNRFRRGLGLSMPDGVYESAGNGDKWSEEREAALQTLAAEVRQDATIVSRADEEETTRGMMRRKLEFCEDGFWLITPRGGGFPFYGTQNCADHPADISPSASWSMVECEGCGSQP--SNATFVMSCDGEGFTPPPST 333
            VTG++ GNY+ANGTYRGKLDFF+DDG  NLYFELA + RR+L  AG +      +LPG++M SAL      + ASR LA+C++GYWII  + GDGYPV GVPDCA++P DIR N WLV SCE+CGV+EAPSFVAPT+ CA SG+A       +P+PA PA C TVYVTGPAAGVY Q+G Y  RGDFFS N AWNMYW FYAGKPVNRNRFRRGL  S+P+   + AG+ ++WSEE E ALQTLA +      +  R +   +     RRKLE C+DGFWLITPRGGGFPFYGT NCADHPADIS  A+WS+VEC+GCGS+P     T  +SCDG  FTPPPST
Sbjct:  589 VTGEFPGNYTANGTYRGKLDFFNDDGTVNLYFELADSSRRLLSSAGEEREGGRRLLPGELMASALEERYHALAASRRLAICTSGYWIITQVAGDGYPVLGVPDCADHPVDIRANTWLVASCESCGVQEAPSFVAPTIACA-SGAAGXXXXGATPSPALPAICGTVYVTGPAAGVYVQQGDYGTRGDFFSGNNAWNMYWTFYAGKPVNRNRFRRGL--SVPE---DRAGS-ERWSEEYELALQTLADD------LFRRKEAGRSADWNGRRKLEVCDDGFWLITPRGGGFPFYGTLNCADHPADISNLAAWSVVECDGCGSEPLDGTVTVTISCDGADFTPPPST 919          
BLAST of mRNA_H-elongata_contig5684.13136.1 vs. uniprot
Match: D7G5Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q9_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.070e-46
Identity = 90/140 (64.29%), Postives = 107/140 (76.43%), Query Frame = 0
Query:    2 VTGDYAGNYSANGTYRGKLDFFSDDGQFNLYFELA-ADRRMLQEAGLD------VLPGDVMVSALGGGV---GASRNLALCSTGYWIIAAITGDGYPVFGVPDCAENPADIRGNPWLVTSCETCGVEEAPSFVAPTVTCA 131
            VTGD+ GNY+ANGTYRG+LDFFSDDG FNLYFELA + RR+L  A  +      +LPG+VM SAL        ASR LA+C++GYWII  + GDGYPV G PDCA++P DIR N WLV SCE+CGV+EAPSFVAPT+TCA
Sbjct:  522 VTGDFPGNYTANGTYRGRLDFFSDDGTFNLYFELADSSRRLLSSADEEREGERRLLPGEVMASALEERYHAWAASRRLAICTSGYWIITQVAGDGYPVLGAPDCADHPVDIRTNTWLVASCESCGVQEAPSFVAPTITCA 661          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5684.13136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JY66_9PHAE1.380e-13062.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Q9_ECTSI1.070e-4664.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5684contigH-elongata_contig5684:5155..10975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5684.13136.1mRNA_H-elongata_contig5684.13136.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5684 4156..10999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5684.13136.1 ID=prot_H-elongata_contig5684.13136.1|Name=mRNA_H-elongata_contig5684.13136.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=402bp
MVTGDYAGNYSANGTYRGKLDFFSDDGQFNLYFELAADRRMLQEAGLDVL
PGDVMVSALGGGVGASRNLALCSTGYWIIAAITGDGYPVFGVPDCAENPA
DIRGNPWLVTSCETCGVEEAPSFVAPTVTCAESGSAQAIGSTTSPAPASP
ATCQTVYVTGPAAGVYAQEGTYANRGDFFSNNRAWNMYWVFYAGKPVNRN
RFRRGLGLSMPDGVYESAGNGDKWSEEREAALQTLAAEVRQDATIVSRAD
EEETTRGMMRRKLEFCEDGFWLITPRGGGFPFYGTQNCADHPADISPSAS
WSMVECEGCGSQPSNATFVMSCDGEGFTPPPSTAFSTPSSASNTLLASPA
PSGGDDAIVGLGSDEEAAATSGVTGRWNRHAGGASGLAVVLAVAAVVLAT
A*
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