prot_H-elongata_contig56792.13129.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig56792.13129.1
Unique Name	prot_H-elongata_contig56792.13129.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	113

Homology

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: D7G0W9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0W9_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.300e-52
Identity = 86/104 (82.69%), Postives = 93/104 (89.42%), Query Frame = 0

Query:    1 MGGDVEGAGGARSHSAF-GSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCGEI 103
            MGGDVEG GG RSHSAF G RFFPDEAF IPH+APGLLT AN G+H+NGSQFYITTE AGHLDGRSVAFGRVT G+EVVRA++GMYSIRGKPVSEIT+  CGEI
Sbjct:  181 MGGDVEGYGGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECGEI 284

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A836C8D9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.880e-38
Identity = 61/100 (61.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query:    1 MGGDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARC 100
            MGGDVEG  G +SHS  G R+F DE FFIPHS+ GLLT AN G+ +NGSQFY+T  PA H+DGRSVAFGRV  GM+VVR + G++S++ KPVS++ +  C
Sbjct:  125 MGGDVEGGNGKKSHSGLGKRYFRDEGFFIPHSSEGLLTMANSGIDTNGSQFYVTIGPAPHMDGRSVAFGRVVGGMDVVRRVFGLFSVKAKPVSKVVITDC 224

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A7S2BM91_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM91_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.870e-30
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0

Query:    3 GDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCGEIGQTG 107
            GDVE   G  SHSA G+R+F DEA  +PH+  G+++  N GV +NGSQFYITT P+  LDG SVAFGRVTSGM+VV ++  ++SIRG PVS +TV   G + + G
Sbjct:  165 GDVELKTGKGSHSALGTRYFDDEALVMPHTEAGIVSMVNGGVDTNGSQFYITTAPSPQLDGYSVAFGRVTSGMDVVGSITNLFSIRGVPVSTVTVTAAGVLREGG 269

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: F0Y6J0_AURAN (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J0_AURAN)

HSP 1 Score: 112 bits (280), Expect = 2.800e-29
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0

Query:    1 MGGDVEGAGGARSHSAF-GSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHG-MYSIRGKPVSEITVARCGEI 103
            +GG V+  GG  SHSAF G R F DE FF+PH+ PGLL+ AN GV +NGSQFY+TT  A H+DGR VAFGRV +G++VV+ L   +Y+ RG PV  + +A CG +
Sbjct:   62 LGGVVDAPGG--SHSAFAGRRVFADEGFFVPHAEPGLLSMANAGVDTNGSQFYLTTAAAPHMDGRCVAFGRVAAGLDVVQTLADTLYTQRGVPVEHVEIAACGTL 164

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A7S4EDH8_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDH8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 5.410e-28
Identity = 58/105 (55.24%), Postives = 72/105 (68.57%), Query Frame = 0

Query:    1 MGGDVEGAGGARSHSAFGSR-FFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALH-GMYSIRGKPVSEITVARCGEI 103
            +GG +  A G  S SAF  R  F DE FF+PH+ PGLLT A+ GV  NGSQFY+T EPA HLDGR VAFGR+  G++VVR LH  +Y+ RG PV ++ V  CG +
Sbjct:  120 LGGALPDAPGG-SRSAFADRPLFADEGFFVPHAEPGLLTMASSGVDGNGSQFYVTIEPAPHLDGRCVAFGRLVEGLDVVRHLHDSLYTQRGVPVEKVVVEACGVV 223

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: W7TUT6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUT6_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.000e-27
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0

Query:    9 GGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCG 101
            GGA +HS  G RFFPDE+F IPH+ PGLL+  + G H NGS F+I+T    HLDGRSV FGRV  G+EV+ A+   Y+IRG+PV+ + V   G
Sbjct:  171 GGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 263

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A024TP67_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP67_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.280e-26
Identity = 47/100 (47.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    2 GGDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCG 101
            GGD+    G    +A G+R+F DE F + ++ PG++  AN GV++NGSQF+IT++P  HL+GR+VAFG+V  G++VVR +  +YS++GKP++E+ V  CG
Sbjct:  112 GGDITHGNGQGGMTASGARYFDDENFALRYTEPGVVGMANSGVNTNGSQFFITSKPMPHLNGRNVAFGKVVDGLDVVRKIENVYSVKGKPLTEVVVVDCG 211

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A4D9CP74_9STRA (PPIase cyclophilin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP74_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.410e-26
Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 0

Query:    9 GGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCG 101
            GGA +HS  G RFFPDE+F IPH+ PGLL+  + G H NGS F+I+T    HLDGRSV FGRV  G+EV+ A+   Y+IRG+PV+ + V   G
Sbjct:  286 GGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 378

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: W4G7R5_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7R5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.340e-25
Identity = 48/100 (48.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query:    2 GGDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARCG 101
            GGD+    G    +A G+R F DE F + ++  G+L  AN GV++NGSQF+IT++P  HL+GR+VAFG+V  GM+VVR +  +YS++GKP+++I V  CG
Sbjct:  109 GGDITAGNGKGGVTASGARHFDDENFALRYTEAGVLGMANSGVNTNGSQFFITSKPMPHLNGRNVAFGKVVEGMDVVRKIENVYSVKGKPLTDIVVVDCG 208

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BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Match: A0A7S3NRJ3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NRJ3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.430e-25
Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 0

Query:    1 MGGDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQFYITTEPAGHLDGRSVAFGRVTSGMEVVRAL-HGMYSIRGKPVSEITVARCG 101
            MGGDV  AGG  SHSA+  R++ DE FF+PHS  G+L++AN G+ +NGSQFYIT +   H+DGR VAFGRV +G +V+  L   +Y  RG P   IT+   G
Sbjct:  147 MGGDVATAGG--SHSAWKQRYYADEGFFVPHSQAGILSSANAGIDTNGSQFYITLKECPHMDGRCVAFGRVATGYDVITGLIKDVYMQRGIPTKSITILDAG 246

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot

BLAST of mRNA_H-elongata_contig56792.13129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0W9_ECTSI	1.300e-52	82.69	Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca...	[more]
A0A836C8D9_9STRA	4.880e-38	61.00	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon...	[more]
A0A7S2BM91_9STRA	9.870e-30	55.24	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Floren...	[more]
F0Y6J0_AURAN	2.800e-29	55.24	Peptidyl-prolyl cis-trans isomerase (Fragment) n=1...	[more]
A0A7S4EDH8_9STRA	5.410e-28	55.24	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pelago...	[more]
W7TUT6_9STRA	2.000e-27	54.84	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc...	[more]
A0A024TP67_9STRA	1.280e-26	47.00	Peptidyl-prolyl cis-trans isomerase n=2 Tax=Aphano...	[more]
A0A4D9CP74_9STRA	1.410e-26	54.84	PPIase cyclophilin-type domain-containing protein ...	[more]
W4G7R5_9STRA	1.340e-25	48.00	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aphano...	[more]
A0A7S3NRJ3_9STRA	5.430e-25	51.96	Peptidyl-prolyl cis-trans isomerase n=1 Tax=Aureou...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 63..78 score: 49.37 coord: 50..62 score: 51.34 coord: 35..50 score: 54.84
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 2..101 e-value: 1.7E-20 score: 73.9
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 1..102 score: 18.582
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 1..104 e-value: 1.0E-29 score: 105.4
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 2..103
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 2..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig56792	contig	H-elongata_contig56792:2135..2926 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig56792.13129.1	mRNA_H-elongata_contig56792.13129.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig56792 2111..2926 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig56792.13129.1 ID=prot_H-elongata_contig56792.13129.1|Name=mRNA_H-elongata_contig56792.13129.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MGGDVEGAGGARSHSAFGSRFFPDEAFFIPHSAPGLLTTANPGVHSNGSQ
FYITTEPAGHLDGRSVAFGRVTSGMEVVRALHGMYSIRGKPVSEITVARC
GEIGQTGANVTP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002130	Cyclophilin-type_PPIase_dom
IPR029000	Cyclophilin-like_dom_sf