prot_H-elongata_contig56343.13081.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56343.13081.1
Unique Nameprot_H-elongata_contig56343.13081.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
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BLAST of mRNA_H-elongata_contig56343.13081.1 vs. uniprot
Match: A0A2H1VB05_SPOFR (SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VB05_SPOFR)

HSP 1 Score: 49.7 bits (117), Expect = 3.450e-5
Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:   20 VQGAESPGEAWSKLVQHYHASGLKERLRLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERRVDPKDVDIVILSGLTPQYD 102
            ++ A+S  EAW  L + Y   GL  RL L    ++ K+        +L ++ ++  +L  +E  +D + V +++LSGLT  YD
Sbjct:   43 IRTAKSAHEAWKILQKAYEGRGLSRRLGLLRSLFSTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYD 125
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BLAST of mRNA_H-elongata_contig56343.13081.1 vs. uniprot
Match: UPI00193D6898 (uncharacterized protein LOC113006278 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193D6898)

HSP 1 Score: 50.8 bits (120), Expect = 5.350e-5
Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 0 
Query:    2 HQAWVSLITTCKGVAFEIVQGAESPGEAWSKLVQHYHASGLKERLRLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERRVDPKDVDIVILSGLTPQYDAEVRML 108
             +A   +    K  A+  V+ AE+  EAWS L + Y   GL  RL L      MK++  ++   ++  +  + ++L  ++  +D + V +++LSGLT  Y+  V  L
Sbjct:   58 QKALAKICLMIKPSAYAYVRSAENAKEAWSNLQKAYEDKGLSRRLTLLRTLSGMKLQNFKNMELYVSEIMSISQKLADMDAALDDEFVAVIMLSGLTEDYNPMVMAL 164
[Close]
BLAST of mRNA_H-elongata_contig56343.13081.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66)

HSP 1 Score: 49.3 bits (116), Expect = 7.680e-5
Identity = 26/83 (31.33%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:   20 VQGAESPGEAWSKLVQHYHASGLKERLRLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERRVDPKDVDIVILSGLTPQYD 102
            ++ A+S  EAW+ L + Y   GL  RL L    +  K+        +L ++ ++  +L  +E  +D + V ++ILSGLT  YD
Sbjct:   71 IRTAKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYD 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56343.13081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2H1VB05_SPOFR3.450e-530.12SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugip... [more]
UPI00193D68985.350e-528.04uncharacterized protein LOC113006278 n=1 Tax=Solen... [more]
UPI00103F0D667.680e-531.33uncharacterized protein LOC114362197 n=1 Tax=Ostri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 15..104
e-value: 8.0E-14
score: 51.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56343contigH-elongata_contig56343:323..646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56343.13081.1mRNA_H-elongata_contig56343.13081.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56343 323..646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56343.13081.1 ID=prot_H-elongata_contig56343.13081.1|Name=mRNA_H-elongata_contig56343.13081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
AHQAWVSLITTCKGVAFEIVQGAESPGEAWSKLVQHYHASGLKERLRLTV
DFYTMKMELGEHPRKFLLRVDQMVKELERVERRVDPKDVDIVILSGLTPQ
YDAEVRML
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