prot_H-elongata_contig5576.13007.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5576.13007.1
Unique Nameprot_H-elongata_contig5576.13007.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig5576.13007.1 vs. uniprot
Match: D8LGW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW0_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 6.950e-23
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 0 
Query:    1 MTTTGNPACSVRVIGDDRDFHRDRQGEPLFSPQSFLLAYPPGPYTCLRTTKNRSVAMLSFHLNRLWESAEATDLKDVARHEGRRSLERRTVDAISRAMEA 100
            +  +   A SV     + +  R   G PL SPQ FLLA PPGPYTCLRT  +RSVAML FHL+RLW+S++AT     AR +GR+SLE+ TV+ I+R  E+
Sbjct:   68 LEMSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTES 167
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BLAST of mRNA_H-elongata_contig5576.13007.1 vs. uniprot
Match: A0A6H5LF55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF55_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 6.230e-22
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 0 
Query:    1 MTTTGNPACSVRVIGDDRDFHRDRQGEPLFSPQSFLLAYPPGPYTCLRTTKNRSVAMLSFHLNRLWESAEATDLKDVARHEGRRSLERRTVDAISRAMEA 100
            +  +   A SV     + +  R   G PL SPQ FLLA PPGPYTCLRT  +RSVAML FHL+RLW S++AT     AR +GR+SLE+ TV+ I+R  E+
Sbjct:   67 LEMSSTTATSVWATCGEPEVRRCPAGGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWHSSQATGFGPAARAQGRQSLEQGTVETIARVTES 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5576.13007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGW0_ECTSI6.950e-2351.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LF55_9PHAE6.230e-2251.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036038Aminotransferase-like, PLP-dependent enzymesSUPERFAMILY56752D-aminoacid aminotransferase-like PLP-dependent enzymescoord: 26..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5576contigH-elongata_contig5576:5066..5806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5576.13007.1mRNA_H-elongata_contig5576.13007.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5576 5042..5806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5576.13007.1 ID=prot_H-elongata_contig5576.13007.1|Name=mRNA_H-elongata_contig5576.13007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MTTTGNPACSVRVIGDDRDFHRDRQGEPLFSPQSFLLAYPPGPYTCLRTT
KNRSVAMLSFHLNRLWESAEATDLKDVARHEGRRSLERRTVDAISRAMEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036038Aminotransferase-like