prot_H-elongata_contig55724.13000.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55724.13000.1
Unique Name	prot_H-elongata_contig55724.13000.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	106

Homology

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 4.570e-34
Identity = 64/104 (61.54%), Postives = 83/104 (79.81%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMIL 104
            +Y+YE VEC RRV LSG+V+F+ PNTAGQ+ T FL ++ FF +  VL+PY+++RD WLARIGHAIVM+S+FVA+  KVD + DD  SQDVFAG LVAAN ++ L
Sbjct:  901 VYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAANVVLAL 1004

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.010e-27
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0

Query:    2 YFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMILA 105
            ++YE +EC RRV L+G+VVF++PNTA Q+  T L A  F +V  +L PY +  D WL+R GH IV LSMF  L+ KVD SD+   SQ VFAGV+VA +C+M LA
Sbjct: 1020 FYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLA 1123

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: A0A6H5KP34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP34_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 3.820e-27
Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMILA 105
            +Y+YE +EC RR+ L+G+VVF++PNTA Q+  T +  ++F V+   L+P +   D W++R+ HA+V +S++VAL+ KVD SD+  SSQ VF  VLVAA+  M+LA
Sbjct:   20 VYYYEVIECGRRILLTGLVVFMYPNTAAQIAITLIMTVVFAVLSEALHPNAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSDEKRSSQKVFEAVLVAAHACMVLA 124

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.810e-27
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMIL 104
            +++YE +EC RRV L+G+VVF++PNTA Q+  T L A  F ++   L PY+++ D W++R+GH +V LSM+VAL+ KVD SD+  SSQ+VF  VLVA +  MIL
Sbjct: 1376 VFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMIL 1479

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 6.480e-27
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0

Query:    2 YFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMILA 105
            ++YE +EC RR+ L+G+V F+FPN A Q+  T L A  F +V  V++PY+++ D WL+R GH IV LSMF AL+ KVD S +   SQDVFAGV VA + ++ILA
Sbjct:  921 FYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILA 1024

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.550e-26
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMIL 104
            +++YE  EC  RV L+G+VVF++P+TA Q+  T + A  F +V  VL+PYS++ D W+ R+GH +V +SMFVAL+ KVD +D+D SSQ VF  VLVAA+  M+L
Sbjct:  562 VFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVL 665

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.290e-26
Identity = 55/104 (52.88%), Postives = 77/104 (74.04%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMIL 104
            +++YE +EC RRV L+G+VVF++PNTA Q+  T L A  F VV   L PY+++ D WL+R+GHA+V +SM+VAL+ KVD S++ + SQ VF  VLVAA+  MIL
Sbjct: 1931 VFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMIL 2034

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.060e-26
Identity = 51/103 (49.51%), Postives = 76/103 (73.79%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMI 103
            +++YE +EC RRV L+G+VVF++PNTA Q+    L A++F ++   L PY+++ D WL R+GHA+V +SM+VAL+ KVD SD+  SSQ VF  +LVAA+  M+
Sbjct:  841 VFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMV 943

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.060e-26
Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    2 YFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMILA 105
            ++YE VEC RRV L+G+VVF+FPN A Q+  T L A  FF +  +++PY +  D WL+R GH IV  SMF  L+ KVD SD+   SQ VFAGVLVA + +M+LA
Sbjct:  908 FYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLA 1011

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BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.450e-25
Identity = 51/105 (48.57%), Postives = 76/105 (72.38%), Query Frame = 0

Query:    1 MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPYSNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANCIMILA 105
            +Y+YE +EC RR+ L+G+VVF++PNTA Q+  T +  ++F V+   L PY+   D W++R+ HA+V +S++VAL+ KVD S++  SSQ VF  VLVAA+  MILA
Sbjct:  881 VYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILA 985

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55724.13000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNY1_ECTSI	4.570e-34	61.54	Probable extracellular nuclease n=1 Tax=Ectocarpus...	[more]
A0A6H5JWT9_9PHAE	1.010e-27	53.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KP34_9PHAE	3.820e-27	47.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0E9_9PHAE	4.810e-27	50.96	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5J7J9_9PHAE	6.480e-27	51.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH65_ECTSI	1.550e-26	50.96	Polymorphic outer membrane protein G/I family prot...	[more]
D7G5Y7_ECTSI	2.290e-26	52.88	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
D7G2Z8_ECTSI	3.060e-26	49.51	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KX12_9PHAE	3.060e-26	52.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FHH1_ECTSI	1.450e-25	48.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..32
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..8
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 9..27
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 77..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 33..50
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 106..106
None	No IPR available	TMHMM	TMhelix		coord: 13..47
None	No IPR available	TMHMM	TMhelix		coord: 57..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55724	contig	H-elongata_contig55724:2901..3218 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55724.13000.1	mRNA_H-elongata_contig55724.13000.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55724 2901..3242 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55724.13000.1 ID=prot_H-elongata_contig55724.13000.1|Name=mRNA_H-elongata_contig55724.13000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MYFYEAVECLRRVFLSGIVVFVFPNTAGQLGTTFLFALLFFVVLMVLNPY
SNQRDGWLARIGHAIVMLSMFVALMAKVDTSDDDISSQDVFAGVLVAANC
IMILAT