prot_H-elongata_contig556.12983.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig556.12983.1
Unique Nameprot_H-elongata_contig556.12983.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: A0A2N9G747_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G747_FAGSY)

HSP 1 Score: 50.8 bits (120), Expect = 1.680e-5
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 MAYAYDIWNRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRS--KPGQNLAPRGASCIML 64
            MA AY I NR  S S+ S  +PYE W+G++P L N+ P+G VGY+  +  K G+ L PR   C+ +
Sbjct:  208 MAVAY-ILNRVPSKSVPS--TPYEFWFGKKPDLSNLRPWGCVGYVHNATHKHGK-LGPRANKCVFI 269          
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: UPI00115E8C8E (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI00115E8C8E)

HSP 1 Score: 50.1 bits (118), Expect = 1.840e-5
Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 NRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKPGQNLAPRGASCIMLGLAPDVPRDTF 75
            NR  S S++  T+PYELWYG+RP L  +  +G   Y+++ +P + L P+   C+ +G   +    TF
Sbjct:   24 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCVFIGYPKETVGYTF 87          
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: UPI0012D47DD2 (hypothetical protein n=1 Tax=Levilactobacillus brevis TaxID=1580 RepID=UPI0012D47DD2)

HSP 1 Score: 50.4 bits (119), Expect = 1.960e-5
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 NRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKPGQNLAPRGASCIMLGLAPDVPRDTF 75
            NR  S S++  T+PYELWYG+RP L  +  +G   Y+++ +P + L P+   CI +G   +    TF
Sbjct:   32 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCIFIGYPKETVGYTF 95          
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: A0A8I6XT42_HORVV (Uncharacterized protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A8I6XT42_HORVV)

HSP 1 Score: 50.4 bits (119), Expect = 2.340e-5
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 NRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKPGQNLAPRGASCIMLGLAPDVPRDTF 75
            NR  S S++  T+PYELWYG+RP L  +  +G   Y+++ +P + L P+   CI +G   +    TF
Sbjct:  536 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAKKCIFIGYPKETVGYTF 599          
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: UPI00136F9A8D (hypothetical protein n=1 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI00136F9A8D)

HSP 1 Score: 50.1 bits (118), Expect = 3.080e-5
Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 NRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKPGQNLAPRGASCIMLGLAPDVPRDTF 75
            NR  S S++  T+PYELWYG+RP L  +  +G   Y+++ +P + L P+   C+ +G   +    TF
Sbjct:   24 NRAPSKSVE--TTPYELWYGKRPKLSFLKVWGCDAYVKKLQP-EKLEPKAEKCVFIGYPKETVGYTF 87          
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Match: T1LVS5_TRIUA (Uncharacterized protein n=1 Tax=Triticum urartu TaxID=4572 RepID=T1LVS5_TRIUA)

HSP 1 Score: 47.4 bits (111), Expect = 8.170e-5
Identity = 22/67 (32.84%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    9 NRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKPGQNLAPRGASCIMLGLAPDVPRDTF 75
            NR  S S++  T+PYELW+G++P L  +  +G   Y+++ +P + L P+   C+ +G   +    TF
Sbjct:    5 NRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCEAYVKKLQP-EKLEPKSEKCVFIGYPKETIGYTF 68          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig556.12983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2N9G747_FAGSY1.680e-543.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00115E8C8E1.840e-535.82hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
UPI0012D47DD21.960e-537.31hypothetical protein n=1 Tax=Levilactobacillus bre... [more]
A0A8I6XT42_HORVV2.340e-537.31Uncharacterized protein n=6 Tax=cellular organisms... [more]
UPI00136F9A8D3.080e-535.82hypothetical protein n=1 Tax=Ligilactobacillus sal... [more]
T1LVS5_TRIUA8.170e-532.84Uncharacterized protein n=1 Tax=Triticum urartu Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig556contigH-elongata_contig556:2384..2614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig556.12983.1mRNA_H-elongata_contig556.12983.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig556 2369..2614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig556.12983.1 ID=prot_H-elongata_contig556.12983.1|Name=mRNA_H-elongata_contig556.12983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
MAYAYDIWNRCISSSLDSGTSPYELWYGRRPTLDNVPPFGTVGYLRRSKP
GQNLAPRGASCIMLGLAPDVPRDTFRV
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