prot_H-elongata_contig55320.12947.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55320.12947.1
Unique Name	prot_H-elongata_contig55320.12947.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	162

Homology

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: D7G5N8_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5N8_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.260e-54
Identity = 97/162 (59.88%), Postives = 110/162 (67.90%), Query Frame = 0

Query:    1 LYSTAAAQQRIDQWLRELGNIEPSTPTVDVTSVVVRQPAAAVSAPVAEEVEARPVEAPPAAGAPA-GSGYKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDLP 161
            L ST+AAQQRIDQWLRE G    S P                                        GSGYKVKIEWEGAIHEV CDAE T+LEAAMDAGLELP SCMSGSCLTCPGK+VSGSVDQSEGVLE++Q +AG++LTC+SYP+SDVHF V++E+DLP
Sbjct:  135 LVSTSAAQQRIDQWLRESGGEAASAPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGYKVKIEWEGAIHEVNCDAETTLLEAAMDAGLELPSSCMSGSCLTCPGKIVSGSVDQSEGVLEDEQKDAGFLLTCISYPESDVHFAVVDEEDLP 296

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A835YL41_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL41_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.160e-42
Identity = 69/98 (70.41%), Postives = 79/98 (80.61%), Query Frame = 0

Query:   63 APAGSGYKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            AP G GY V I+W+GA H V CD E TVLEAAMDAGL+LPHSCMSGSCLTCPG+L +G V+Q +GVLE+DQ  AG MLTCVSYP SD+ F VI ED+L
Sbjct:  134 APPGDGYVVTIDWDGATHVVRCDGETTVLEAAMDAGLDLPHSCMSGSCLTCPGRLSAGRVEQGDGVLEDDQIAAGLMLTCVSYPLSDLRFEVIGEDEL 231

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A2J6KNW1_LACSA (Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6KNW1_LACSA)

HSP 1 Score: 116 bits (290), Expect = 3.410e-30
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE EG   E+  D + T+LE A+D+G+ +PH C  G C+TCP KL+SGSVDQSEG+L +D  E GY L CVSYPKSD H  +I E++L
Sbjct:   49 YKVAIEHEGETTELEVDPDETILEKALDSGMSVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 140

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A103Y2Z7_CYNCS (Ferredoxin n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y2Z7_CYNCS)

HSP 1 Score: 115 bits (289), Expect = 4.560e-30
Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE EG   E+  D + T+LE A+D GL++PH C  G C+TCP KL+SGSV+QSEG+L +D  E GY L CVSYPKSD H  +I E++L
Sbjct:   47 YKVSIEHEGQTTELEVDPDETILEKALDTGLDVPHDCKLGVCMTCPAKLLSGSVNQSEGMLSDDVIERGYSLLCVSYPKSDCHIKIIPEEEL 138

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: UPI0010A2FF49 (ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FF49)

HSP 1 Score: 115 bits (288), Expect = 6.280e-30
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE +G + E+  D E T+L  A+D+GLE+PH C  G C+TCP +L+SGSVDQSEG+L +D  E GY L C SYP+SD H   I ED+L
Sbjct:   46 YKVVIEHQGELRELEIDPEETILSKALDSGLEVPHDCKLGVCMTCPARLLSGSVDQSEGMLSDDVVERGYALLCASYPRSDCHIRTIPEDEL 137

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A1S2YX51_CICAR (ferredoxin C 1, chloroplastic n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YX51_CICAR)

HSP 1 Score: 113 bits (283), Expect = 3.780e-29
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 0

Query:   67 SGYKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            S YKV IE EG   ++  + + T+L  A+D+GL +PH C  G C+TCP KL+SGSVDQS+G+L +D  E GY L C SYP+SD HF  I ED+L
Sbjct:   46 SSYKVVIEHEGQTTQLEVEPDETILSKALDSGLSVPHDCKLGVCMTCPAKLISGSVDQSDGMLSDDVVERGYALLCASYPRSDCHFRTIPEDEL 139

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A5N6MZ86_9ASTR (Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MZ86_9ASTR)

HSP 1 Score: 112 bits (281), Expect = 8.000e-29
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE +G   E+  D + T+LE A++AGL +PH C  G C+TCP KL+SGSVDQSEG+L ED  E GY L CVSYPKSD    +I E++L
Sbjct:   50 YKVAIEHDGQTTELEVDPDETILEKALEAGLAVPHDCKLGVCMTCPAKLLSGSVDQSEGMLSEDVIERGYSLLCVSYPKSDCQVKIIPEEEL 141

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A7J7LHT5_9MAGN (Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LHT5_9MAGN)

HSP 1 Score: 112 bits (280), Expect = 8.290e-29
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE EG+I E+  D + T+L  A+D GL +PH C  G C+TCP KL+SGSVDQSEG+L +D  + GY L CV+YP+SD H   I E++L
Sbjct:   39 YKVVIEHEGSIKELEVDEDETILNKALDIGLSVPHDCKLGVCMTCPAKLMSGSVDQSEGMLSDDVVDNGYALLCVAYPRSDCHIRTIPEEEL 130

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A6J1IWL8_CUCMA (Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1IWL8_CUCMA)

HSP 1 Score: 112 bits (279), Expect = 1.890e-28
Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE EG   E+  DA+ ++L +A+D GL++PH C  G C+TCP +LVSG+VDQSEG+L +D  E GY L CV+YP+SD H   I E++L
Sbjct:   56 YKVVIEHEGQTTELEVDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCVAYPRSDCHIQTIPEEEL 147

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BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Match: A0A1Q3CXQ9_CEPFO (Fer2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CXQ9_CEPFO)

HSP 1 Score: 112 bits (279), Expect = 2.120e-28
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   69 YKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLELPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDVHFTVIEEDDL 160
            YKV IE EG   E+    + T+L  A+D+GL +PH C  G C+TCP KLVSG+VDQSEG+L +D  E GY L C SYP+SD HF  I E+DL
Sbjct:   60 YKVVIEHEGQATELDVGPDETILAKALDSGLSVPHDCKLGVCMTCPAKLVSGTVDQSEGMLSDDVVERGYALLCASYPRSDCHFRTIPEEDL 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55320.12947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5N8_ECTSI	1.260e-54	59.88	Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G...	[more]
A0A835YL41_9STRA	7.160e-42	70.41	Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 Re...	[more]
A0A2J6KNW1_LACSA	3.410e-30	56.52	Ferredoxin n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6...	[more]
A0A103Y2Z7_CYNCS	4.560e-30	56.52	Ferredoxin n=1 Tax=Cynara cardunculus var. scolymu...	[more]
UPI0010A2FF49	6.280e-30	55.43	ferredoxin C 1, chloroplastic n=1 Tax=Prosopis alb...	[more]
A0A1S2YX51_CICAR	3.780e-29	53.19	ferredoxin C 1, chloroplastic n=1 Tax=Cicer arieti...	[more]
A0A5N6MZ86_9ASTR	8.000e-29	56.52	Ferredoxin n=2 Tax=Mikania micrantha TaxID=192012 ...	[more]
A0A7J7LHT5_9MAGN	8.290e-29	54.35	Ferredoxin n=1 Tax=Kingdonia uniflora TaxID=39325 ...	[more]
A0A6J1IWL8_CUCMA	1.890e-28	53.26	Ferredoxin n=4 Tax=Cucurbitaceae TaxID=3650 RepID=...	[more]
A0A1Q3CXQ9_CEPFO	2.120e-28	55.43	Fer2 domain-containing protein n=1 Tax=Cephalotus ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 69..160 e-value: 1.1E-27 score: 93.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 74..147 e-value: 1.9E-13 score: 50.1
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 69..158 score: 11.49
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 61..159 e-value: 2.3E-25 score: 90.6
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 57..160
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 57..160
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 54..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55320	contig	H-elongata_contig55320:2167..3590 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55320.12947.1	mRNA_H-elongata_contig55320.12947.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55320 2167..3590 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55320.12947.1 ID=prot_H-elongata_contig55320.12947.1|Name=mRNA_H-elongata_contig55320.12947.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=162bp
LYSTAAAQQRIDQWLRELGNIEPSTPTVDVTSVVVRQPAAAVSAPVAEEV
EARPVEAPPAAGAPAGSGYKVKIEWEGAIHEVTCDAEMTVLEAAMDAGLE
LPHSCMSGSCLTCPGKLVSGSVDQSEGVLEEDQTEAGYMLTCVSYPKSDV
HFTVIEEDDLP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010241	Fd_pln
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR036010	2Fe-2S_ferredoxin-like_sf