prot_H-elongata_contig55184.12926.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55184.12926.1
Unique Nameprot_H-elongata_contig55184.12926.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length184
Homology
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1A7FCD (Hypothetical protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1A7FCD)

HSP 1 Score: 88.6 bits (218), Expect = 3.490e-17
Identity = 54/184 (29.35%), Postives = 97/184 (52.72%), Query Frame = 0
Query:    3 HRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVP---GLHVVTTRVAEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 183
            H+  D  +++L   + +++I D QP   VV++P F  L+  + LD    +P   G+  V +     +  A  + K +L      LTTD WT+  G  Y+ +T  ++ + +F +N ITL+       HT++ + E L   ++++ +     T+TTD AAN+KKA + +   EW  C+AH ++L +
Sbjct:   98 HKHKDNRQKELRKFLTDWIIDDLQPL-YVVQSPLFCRLI--SELDPAFIMPDEKGIKKVISNAYNYTLPA-LIKKIKLEAKNISLTTDMWTSRGGQGYIGITCSYV-DSNFNLNEITLTVNYVRYPHTAQHITESLEEILEKWNLRDKVFTITTDNAANMKKAISNMNAVEWQECSAHILQLII 276          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001F8DAAAB (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8DAAAB)

HSP 1 Score: 87.0 bits (214), Expect = 4.690e-17
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 0
Query:   16 AVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTR-VAEISSDAEQVIKAELRGTRP-GLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLA-EMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK 184
            A+   V +D QP  VV    +  +   T  L+    +P   +++ + + E  S A +  +  L  T    LTTD WT++   +YM +T HFI +G F    +TLS  E   +HTSE LA EM       + I    I +TTD AANIKKA   +L++  H CAAHT+ L ++
Sbjct:  131 ALLRMVCVDFQPLQVVENKGFQEY---TRALNPNYELPSRKILSEKLIPEQYSLARKATQEMLNVTDYIALTTDLWTSDSSKSYMTLTIHFIYDGKFKT--LTLSTREIKDTHTSENLAREMKDICETEWNILDKIICVTTDNAANIKKAVIDILQKRHHSCAAHTLNLVVQ 297          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E)

HSP 1 Score: 85.1 bits (209), Expect = 6.020e-16
Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 0
Query:   16 AVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTR-VAEISSDAEQVIKAELRGTRP-GLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLA-EMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK 184
            A+   V +D QP  VV    +  +   T  L+    +P   +++ + + E    A +  +  L+      LTTD WT++   +YM +T HFI E  F    +TLS  E   +HTSE LA EM       + I    I +TTD AANIKKA   +L++  H CAAHT+ L ++
Sbjct:  125 ALMRMVCVDFQPLQVVENTGFQEY---TRALNPNYELPSRKILSEKMIPEQYCMARRATQEMLKAIDYISLTTDLWTSDSSKSYMTLTIHFIHENKFKT--LTLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDILQKRHHSCAAHTLNLVVQ 291          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1912F6 (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1912F6)

HSP 1 Score: 82.8 bits (203), Expect = 3.800e-15
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 0
Query:    1 QCHRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTRV--AEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 183
            +  +  +  +++L   + +++I D QP   VV++P F  L+    LD    +P    V   +  A  S     + K  +      LTTD WTA +G  Y+ +T  +I +  F +  +TL+       HTS+ + E L   +  + +     T+TTD AAN+KKA + +   EW GC AHT++L +
Sbjct:  101 RAQKHSENRQKELRQFLTDWIIEDFQPL-YVVQSPSFRKLI--CELDPSFIIPDEKGVKKIIYNAYNSMLPTLIEKINVEAKNVSLTTDMWTAKNGQGYIGITCSYI-DSKFNLYEVTLTVNYVRYPHTSQHIMESLEETLDEWKLREKTFTITTDNAANMKKAISDMDGIEWQGCTAHTLQLVI 281          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1AB16C (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1AB16C)

HSP 1 Score: 81.6 bits (200), Expect = 9.060e-15
Identity = 59/182 (32.42%), Postives = 92/182 (50.55%), Query Frame = 0
Query:    7 DGSKEKLLNAVA---EFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVP---GLHVVTTRVAEISSDAE-QVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 181
            DGS    +N +    E +  D QP   VV++P F  L+  + LD    +P   G+  V  +  + +  A  + IK + +     +TTD WTA +G  Y+ VT  +I +  F +N ITL+       HT++ +AE L      + +     T+TTD AAN+KKA   +    W GC+AHT++L
Sbjct:   82 DGSTGNAINHLLNEHEILKEDLQPL-YVVQSPSFWRLI--SKLDPAFIMPDEKGIKKVIYKAYKFTMPALIEKIKDDAKSV--SITTDMWTARNGQGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLEEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQGCSAHTLQL 257          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C17C339 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C17C339)

HSP 1 Score: 77.0 bits (188), Expect = 1.400e-14
Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0
Query:   62 VAEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 181
            + +I  DA+ V           +TTD WTA +G  Y+ VT  +I +  F +N ITL+       HT++ +AE L      + +     T+TTD AAN+KKA   +    W GC+AHT++L
Sbjct:    5 IKKIKDDAKSV----------SITTDMWTARNGQEYIGVTCSYI-DTKFNLNEITLTVNYVRYLHTAQHVAESLKEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQGCSAHTLQL 113          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI00035A25D1 (zinc finger BED domain-containing protein 1-like n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A25D1)

HSP 1 Score: 78.6 bits (192), Expect = 2.350e-14
Identity = 58/178 (32.58%), Postives = 90/178 (50.56%), Query Frame = 0
Query:   10 KEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVT-TRVAEISSDAEQVIKAELRGTR-PGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWH-GCAAHTIELALK 184
            K  L N VA+FV+LD QPF+VV +  +  H L  A +D R S+P    +T T +  +  +    ++ EL       LTTD+WT+     YMAVTAHF+ +    +    +       S T++++AE L   M  + I      + TD AAN+  A  +L    +H  C AHT+ + ++
Sbjct:   52 KHALDNLVAQFVVLDMQPFTVVEDRGF--HTLMNA-MDPRYSLPSRRELTRTLIPNLYREEYANLQKELNDAEFITLTTDDWTSWSTKGYMAVTAHFV-DSQMQLKSKIIEIRRITSSQTADRIAEELRGIMSAWDITTKVFAIVTDNAANMIAAIKKL--PVYHVPCFAHTLNIVVQ 223          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C1C92E1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C92E1)

HSP 1 Score: 76.3 bits (186), Expect = 5.550e-13
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = 0
Query:   74 KAELRGTRPGLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELAL 183
            K  +      LTTD WTA +G  Y+ +T  +I +  F +  +TL+       HTS+ + E L   +  + +     T+TTD AAN+KKA + +   EW GC AHT++L +
Sbjct:    8 KINVEAKNVSLTTDMWTAKNGQGYIGITCSYI-DSKFNLYEVTLTVNYVRYPHTSQHIMESLEETLDEWKLREKTFTITTDNAANMKKAISDMDGIEWQGCTAHTLQLVI 116          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI001C197A25 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C197A25)

HSP 1 Score: 74.3 bits (181), Expect = 2.920e-12
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 0
Query:   84 LTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIEL 181
            +TTD WTA +G  Y+ VT  +I +  F +N ITL+       HT++ +AE L      + +     T+TTD AAN+KKA   +    W  C+AHT++L
Sbjct:   35 ITTDMWTARNGQGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLDEVFNEWNLRDKVFTITTDNAANMKKAIASMSNIRWQECSAHTLQL 131          
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Match: UPI00188632C7 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI00188632C7)

HSP 1 Score: 73.6 bits (179), Expect = 5.990e-12
Identity = 55/178 (30.90%), Postives = 83/178 (46.63%), Query Frame = 0
Query:    8 GSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRVSVPGLHVVTTRVAEISSDAEQVIKAELRGTRP-GLTTDNWTANDGTAYMAVTAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAITLTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK 184
            G K++L  A+A  V+ D QPFSVV +    G     A LD    +P    +   V E   +     +A +R      LT D W++    A +AVT HF+ +    V  + L     P SHTS  +A+ LTA M+ + IE    ++ TD A ++  A  + L      C A ++ L +K
Sbjct:  116 GRKQELDEALANMVVKDWQPFSVVDDC---GFKALVASLDPAYVLPSRRALKKMVLEKYEEERSKAEAAVRQAEAVSLTADTWSSVGADACLAVTCHFLDQA-MRVATVLLGVRPLPQSHTSGHVADSLTALMEEWAIEGKVTSIVTDAAPHMV-ASVRDLNLRHALCFARSLNLVVK 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55184.12926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C1A7FCD3.490e-1729.35Hypothetical protein n=2 Tax=Rhizophagus irregular... [more]
UPI001F8DAAAB4.690e-1735.47Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI0018D0C22E6.020e-1634.30E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella... [more]
UPI001C1912F63.800e-1529.19Hypothetical protein n=3 Tax=Rhizophagus irregular... [more]
UPI001C1AB16C9.060e-1532.42Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI001C17C3391.400e-1435.00Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI00035A25D12.350e-1432.58zinc finger BED domain-containing protein 1-like n... [more]
UPI001C1C92E15.550e-1334.55Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI001C197A252.920e-1237.76Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
UPI00188632C75.990e-1230.90E3 SUMO-protein ligase ZBED1-like n=1 Tax=Syngnath... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007021Domain of unknown function DUF659PFAMPF04937DUF659coord: 62..184
e-value: 1.0E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 10..183
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 10..183
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 71..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55184contigH-elongata_contig55184:2260..3225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55184.12926.1mRNA_H-elongata_contig55184.12926.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55184 2260..3225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55184.12926.1 ID=prot_H-elongata_contig55184.12926.1|Name=mRNA_H-elongata_contig55184.12926.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
QCHRKGDGSKEKLLNAVAEFVILDQQPFSVVVEAPYFGHLLRTAGLDTRV
SVPGLHVVTTRVAEISSDAEQVIKAELRGTRPGLTTDNWTANDGTAYMAV
TAHFIKEGDFTVNGITLSCEECPGSHTSEKLAEMLTAYMKRYGIEHSAIT
LTTDTAANIKKAGTQLLEQEWHGCAAHTIELALK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007021DUF659
IPR012337RNaseH-like_sf