prot_H-elongata_contig55152.12923.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55152.12923.1
Unique Nameprot_H-elongata_contig55152.12923.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: D8LFD1_ECTSI (PfkB-type carbohydrate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD1_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 7.060e-18
Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = 0
Query:   76 SQRPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            S RPRVLGLGSAGVDFIA VDRYP AD K++T+SL+V+GGGNCGNTLSA
Sbjct:   92 SGRPRVLGLGSAGVDFIAAVDRYPTADEKVQTQSLQVLGGGNCGNTLSA 140          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: C1E1D8_MICCC (PfkB family carbohydrate kinase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1D8_MICCC)

HSP 1 Score: 68.2 bits (165), Expect = 7.380e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   72 DAMKSQ--RPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            DA K++   PRV+G+GSAGVD++A V  +PE D K+RT++ E  GGGNCGN L+A
Sbjct:   58 DAWKARLNAPRVVGVGSAGVDYLASVAAFPEPDQKLRTDAFETQGGGNCGNALTA 112          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A7S1T7S5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7S5_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 9.580e-11
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 0
Query:   78 RPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLS 123
            RP VLGLG+AG+DF+A+V  +P+ D KIRT   +++GGGNC NTL+
Sbjct:   85 RPHVLGLGTAGLDFLAVVSSFPQPDTKIRTSEFKMLGGGNCANTLT 130          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: UPI001CC728BD (hypothetical protein n=1 Tax=Klebsiella aerogenes TaxID=548 RepID=UPI001CC728BD)

HSP 1 Score: 63.2 bits (152), Expect = 9.930e-11
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query:   80 RVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            +++G+GSA VD++A V  YP+ D K+RTE LEV GGGNCGN L+A
Sbjct:   10 KIVGMGSACVDYLAQVAAYPQPDDKLRTERLEVQGGGNCGNALTA 54          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A2V0NPK3_9CHLO (PfkB domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPK3_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 7.220e-10
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   77 QRPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            +R +V+G GS GVD++A V  YP+ D K+RT++LEV GGGNC N L+A
Sbjct:   41 RRIKVVGCGSCGVDYLASVAAYPKPDEKLRTDTLEVQGGGNCANALTA 88          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A7S0ZEC5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEC5_9RHOD)

HSP 1 Score: 63.2 bits (152), Expect = 1.240e-9
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   74 MKSQRPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLS 123
            M    PRVL LGSAG+D +A VD+YP  D KIRT  ++ MGGGN  NT S
Sbjct:   47 MNGNTPRVLCLGSAGIDMLARVDQYPSPDQKIRTTQVDYMGGGNAANTAS 96          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A5J4XD92_9CHLO (Carbohydrate kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XD92_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 5.320e-9
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   56 SRKPFFVR----------VSMAGTDGDAMKSQRPRVLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            +R PF VR           S     G   ++++P+++GLGS G+D++A V  +P+ D K+RT+ +E  GGGNC N L+A
Sbjct:    7 NRTPFGVRRQAHQRKKSLQSCCSAAGHTDEARKPKIVGLGSVGLDYLAQVAAFPKPDEKLRTKQMETRGGGNCANALTA 85          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: UPI0018AF4BEC (ketohexokinase-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF4BEC)

HSP 1 Score: 62.8 bits (151), Expect = 5.470e-9
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   81 VLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLS 123
            VLG G A VD++A+VD +P  D K+RTE+++V+GGGNCGN L+
Sbjct:   64 VLGCGMASVDYVALVDAFPVPDEKVRTENVQVLGGGNCGNALT 106          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A1D1ZX35_AUXPR (PfkB domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX35_AUXPR)

HSP 1 Score: 62.4 bits (150), Expect = 6.320e-9
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   71 GDAMKSQRPR-----VLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            G AMK  RP      VLGLGS G+D +A+VD +P  D KIR   L + GGGNC N L+A
Sbjct:   54 GSAMKEPRPAQLDCAVLGLGSCGLDTLALVDSFPAPDEKIRARRLLIQGGGNCANALTA 112          
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Match: A0A1D2A1F7_AUXPR (Uncharacterized protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A1F7_AUXPR)

HSP 1 Score: 62.4 bits (150), Expect = 7.590e-9
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   71 GDAMKSQRPR-----VLGLGSAGVDFIAIVDRYPEADAKIRTESLEVMGGGNCGNTLSA 124
            G AMK  RP      VLGLGS G+D +A+VD +P  D KIR   L + GGGNC N L+A
Sbjct:   54 GSAMKEPRPAQLDCAVLGLGSCGLDTLALVDSFPAPDEKIRARRLLIQGGGNCANALTA 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55152.12923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD1_ECTSI7.060e-1881.63PfkB-type carbohydrate kinase n=1 Tax=Ectocarpus s... [more]
C1E1D8_MICCC7.380e-1156.36PfkB family carbohydrate kinase n=1 Tax=Micromonas... [more]
A0A7S1T7S5_9RHOD9.580e-1158.70Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI001CC728BD9.930e-1160.00hypothetical protein n=1 Tax=Klebsiella aerogenes ... [more]
A0A2V0NPK3_9CHLO7.220e-1056.25PfkB domain-containing protein n=1 Tax=Raphidoceli... [more]
A0A7S0ZEC5_9RHOD1.240e-958.00Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4XD92_9CHLO5.320e-937.97Carbohydrate kinase n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
UPI0018AF4BEC5.470e-958.14ketohexokinase-like n=1 Tax=Dioscorea cayennensis ... [more]
A0A1D1ZX35_AUXPR6.320e-952.54PfkB domain-containing protein n=1 Tax=Auxenochlor... [more]
A0A1D2A1F7_AUXPR7.590e-952.54Uncharacterized protein n=2 Tax=Auxenochlorella pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 79..124
e-value: 1.4E-6
score: 30.1
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 79..122
NoneNo IPR availablePANTHERPTHR42774:SF1PFKB-LIKE CARBOHYDRATE KINASE FAMILY PROTEINcoord: 70..124
NoneNo IPR availablePANTHERPTHR42774FAMILY NOT NAMEDcoord: 70..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55152contigH-elongata_contig55152:2331..3307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55152.12923.1mRNA_H-elongata_contig55152.12923.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55152 2279..3520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55152.12923.1 ID=prot_H-elongata_contig55152.12923.1|Name=mRNA_H-elongata_contig55152.12923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MGTKVGLVVIALAQAGVSAWGWTGPIGVTRDTLTSSRGAAPAPTPCIDDI
LGSGRSRKPFFVRVSMAGTDGDAMKSQRPRVLGLGSAGVDFIAIVDRYPE
ADAKIRTESLEVMGGGNCGNTLSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029056Ribokinase-like