prot_H-elongata_contig5512.12918.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5512.12918.1
Unique Nameprot_H-elongata_contig5512.12918.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A6H5KYH1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH1_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 3.010e-42
Identity = 109/285 (38.25%), Postives = 127/285 (44.56%), Query Frame = 0 
Query:    1 MSPLCLACAGGHEDTAIFLLTRADADPNNVAGAVAAVAAVAGGLFETNTRGEFTDESSVRAA----PSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPIM----------------------------------------------------------------------------RGHHRQAEERTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALIWEGEASVTAVADEGDTALHVAAAAG 205
            +SPLCLAC GGHE+ A+ LL RA+ADPNN  GA       A   +   T  + T  S V  A    P  PL LAV  GL R V EL+ RGARVDT R EDGW ALH+CA+ G+A +M                                                                            RG  R AE++TWAGRTPLHRAA  GHTE+VLRLL +GV+VDP D                        EG+ASV A  DEGDT LH AA +G
Sbjct:   73 LSPLCLACRGGHEEAALLLLHRANADPNNATGA-------AEQRYGQTTYDDLTGGSGVGGAGGAPPPTPLALAVVTGLQRVVEELLARGARVDTPRPEDGWTALHLCAARGDALMMEVLLRAPLADAGARTSQLETPLSVASSRGHLSVVDMLLGGDXXXXXXXXXTGGEPAGKPTASDPPSVSAATGATGNRGARRHAEDKTWAGRTPLHRAASAGHTEVVLRLLAHGVAVDPTDSRRAXXXXXXXXXXXXXXXXXXXXEGKASVAAATDEGDTVLHAAAGSG 350
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: W5M8C1_LEPOC (Transient receptor potential cation channel subfamily A member 1 n=4 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5M8C1_LEPOC)

HSP 1 Score: 74.3 bits (181), Expect = 6.280e-12
Identity = 68/218 (31.19%), Postives = 102/218 (46.79%), Query Frame = 0 
Query:    2 SPLCLACA-GGHEDTAIFLLTRADADPNNVAGAVAAVAAVAGGLFETNT----RGE------FTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAP---IMRGHHRQAEERT----WAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALIWEGEASVTAVADEGDTALHVA 201
            +P  LAC+   HE   I L   A     N  G  A  AA   G  ++      +GE      FT  + +  + S PL LAV  G +  ++  +  GA++D  +  D   ALH   + G      +M   H + EE       A +TPLH+A++  H ++V  LL+ G  ++ ID  G TPL+LA R G W T   L+ +G A+V     +G   +H+A
Sbjct:  193 TPSMLACSIDNHEALGILLKHGAKLCRQNKLGHFAVHAAAFAGAKKSMEIILKKGEEMGHSVFTHINYLDKSSSSPLHLAVHGGNIEVIKLCIDNGAKIDLQQC-DKSTALHFACTQGATEAVKLMLSSHDRVEEVVNIIDGAHQTPLHKASIFDHVDLVEYLLLKGAKIESIDCKGHTPLLLATRCGAWRTVELLLNKG-ANVKIRDKQGCNFVHLA 408
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A210Q7N4_MIZYE (Transient receptor potential cation channel subfamily A member 1 n=3 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210Q7N4_MIZYE)

HSP 1 Score: 71.2 bits (173), Expect = 7.180e-11
Identity = 52/157 (33.12%), Postives = 72/157 (45.86%), Query Frame = 0 
Query:   53 FTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPIMR--------GHHRQAEERTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALIWEGEASVTAVADEGDTALHVA 201
            FTD+++     + PL  AV  G + AVR  +  GA VD  + ED    LH   + G+  +++           R          TPLHRAAL  H  +V  LL  G  +D  D    TPL++AA +G W T + LI E   S+     E    LH+A
Sbjct:  226 FTDKAN-----NMPLHAAVNGGDIEAVRVCIAAGAAVDAQQ-EDKSTPLHFACAQGSVELIKIMQELQPTRFSRALTSNDVLKMTPLHRAALFNHVNVVEYLLKQGAEIDAQDSQDRTPLLIAASKGCWKTVQCLI-ENNVSLAKTDRENRNFLHLA 375
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: UPI001458B0F1 (transient receptor potential cation channel subfamily A member 1-like isoform X1 n=4 Tax=Pecten maximus TaxID=6579 RepID=UPI001458B0F1)

HSP 1 Score: 66.6 bits (161), Expect = 2.760e-9
Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 0 
Query:   53 FTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPIMR-GHHRQAEERTWAGRT-------PLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
            FTD+++     + PL  AV  G + AVR  +  GA VD  + ED    LH   + G+  +++     Q +  + A RT       PLHRA L  H  +V  LL  G  +D  D    TPL++AA +G W T + L+
Sbjct:  266 FTDKAN-----NMPLHAAVNGGHIEAVRVCIAAGAAVDAQQ-EDKSTPLHFACAQGSVELIKIMQELQPDRFSTALRTCDVLKMTPLHRATLFNHVNVVEYLLKQGADIDAQDSQDRTPLLIAASKGCWRTVQCLM 395
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8J4U2K0_CLAMG (Transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4U2K0_CLAMG)

HSP 1 Score: 65.9 bits (159), Expect = 3.130e-9
Identity = 51/151 (33.77%), Postives = 74/151 (49.01%), Query Frame = 0 
Query:   59 VRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPIMRGHHRQAEERTW--------AGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALIWEGEASVTAVADEGDTALHVA 201
            V  + S PL LAV  G +  ++  +  GA++D  +  D   ALH   + G A  ++    QA ER          A +TPLH+AA+  H E+V  L+  G  +D ID  G +PL+LA   G W +   L+  G A +T     G   LH+A
Sbjct:   24 VDKSTSSPLHLAVRGGNLEVIKLCIAHGAKIDQQQC-DKSTALHFACTQGAAEAVKVM-LQAYERVCDIINITDGAFQTPLHKAAIFDHYELVEYLISQGADIDFIDCKGHSPLLLATSCGAWRSVNLLLSHG-ADLTVKDKAGCNFLHLA 171
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8J1UC15_OWEFU (Ofus.G11986 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UC15_OWEFU)

HSP 1 Score: 65.9 bits (159), Expect = 5.100e-9
Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 0 
Query:   45 FETNTRGEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPIMR----------GHHRQAEERTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
            +  N    F D+S  R     PL  AV  G + AV+  +  GA++D  + +DG N +H+  S G+  +++          GH  + ++      TPLH AAL  + EI   L+  G SV   DK+G TPL+LAA +  W T   L+
Sbjct:  330 YRRNEMMSFMDKSRNR-----PLHSAVNGGDIEAVKICLNAGAQIDALQ-DDGSNPIHLACSQGSLEMIKVMFEKYPDSVGHVIRQKDVLMM--TPLHIAALVDNPEIATHLIENGASVHAKDKEGRTPLLLAASKCSWKTVDVLL 467
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8C0YLI9_CYPCA (Transient receptor potential cation channel, subfamily A, member 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YLI9_CYPCA)

HSP 1 Score: 64.7 bits (156), Expect = 1.210e-8
Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 0 
Query:   45 FETNTRGEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPI--MRGHHRQAEE----RTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
              T+    + D+S      S PL LAV  G +  ++  +++GARVD  + +                   M   + + E+    R  A +TPLHRA L  H E+V  L+     +D ID +G++PL++A+R G W T   L+
Sbjct:  149 LSTSVHINYLDKSK-----STPLHLAVRGGNIEVIKLCIIKGARVDQQQCDXXXXXXXXXXXXXXXXXXXMLSSYNKVEDIINIRDGANQTPLHRATLFDHVELVEYLISKEAEIDCIDCNGLSPLLMASRCGAWKTVAFLL 285
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8C0YNK0_CYPCA (Transient receptor potential cation channel, subfamily A, member 1b n=2 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0YNK0_CYPCA)

HSP 1 Score: 64.7 bits (156), Expect = 1.220e-8
Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 0 
Query:   45 FETNTRGEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPI--MRGHHRQAEE----RTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
              T+    + D+S      S PL LAV  G +  ++  +++GARVD  + +                   M   + + E+    R  A +TPLHRA L  H E+V  L+     +D ID +G++PL++A+R G W T   L+
Sbjct:  223 LSTSVHINYLDKSK-----STPLHLAVRGGNIEVIKLCIIKGARVDQQQCDXXXXXXXXXXXXXXXXXXXMLSSYNKVEDIINIRDGANQTPLHRATLFDHVELVEYLISKEAEIDCIDCNGLSPLLMASRCGAWKTVAFLL 359
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BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8C1IKI5_CYPCA (Transient receptor potential cation channel, subfamily A, member 1b n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1IKI5_CYPCA)

HSP 1 Score: 64.7 bits (156), Expect = 1.230e-8
Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 0 
Query:   45 FETNTRGEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPI--MRGHHRQAEE----RTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
              T+    + D+S      S PL LAV  G +  ++  +++GARVD  + +                   M   + + E+    R  A +TPLHRA L  H E+V  L+     +D ID +G++PL++A+R G W T   L+
Sbjct:  159 LSTSVHINYLDKSK-----STPLHLAVRGGNIEVIKLCIIKGARVDQQQCDXXXXXXXXXXXXXXXXXXXMLSSYNKVEDIINIRDGANQTPLHRATLFDHVELVEYLISKEAEIDCIDCNGLSPLLMASRCGAWKTVAFLL 295
[Close]
BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Match: A0A8C1IK34_CYPCA (Transient receptor potential cation channel, subfamily A, member 1b n=7 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1IK34_CYPCA)

HSP 1 Score: 64.7 bits (156), Expect = 1.230e-8
Identity = 42/142 (29.58%), Postives = 67/142 (47.18%), Query Frame = 0 
Query:   45 FETNTRGEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNALHVCASLGNAPI--MRGHHRQAEE----RTWAGRTPLHRAALGGHTEIVLRLLVYGVSVDPIDKDGMTPLMLAAREGHWSTARALI 180
              T+    + D+S      S PL LAV  G +  ++  +++GARVD  + +                   M   + + E+    R  A +TPLHRA L  H E+V  L+     +D ID +G++PL++A+R G W T   L+
Sbjct:  171 LSTSVHINYLDKSK-----STPLHLAVRGGNIEVIKLCIIKGARVDQQQCDXXXXXXXXXXXXXXXXXXXMLSSYNKVEDIINIRDGANQTPLHRATLFDHVELVEYLISKEAEIDCIDCNGLSPLLMASRCGAWKTVAFLL 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5512.12918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH1_9PHAE3.010e-4238.25Protein kinase domain-containing protein n=1 Tax=E... [more]
W5M8C1_LEPOC6.280e-1231.19Transient receptor potential cation channel subfam... [more]
A0A210Q7N4_MIZYE7.180e-1133.12Transient receptor potential cation channel subfam... [more]
UPI001458B0F12.760e-933.82transient receptor potential cation channel subfam... [more]
A0A8J4U2K0_CLAMG3.130e-933.77Transient receptor potential cation channel subfam... [more]
A0A8J1UC15_OWEFU5.100e-932.88Ofus.G11986 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A8C0YLI9_CYPCA1.210e-829.58Transient receptor potential cation channel, subfa... [more]
A0A8C0YNK0_CYPCA1.220e-829.58Transient receptor potential cation channel, subfa... [more]
A0A8C1IKI5_CYPCA1.230e-829.58Transient receptor potential cation channel, subfa... [more]
A0A8C1IK34_CYPCA1.230e-829.58Transient receptor potential cation channel, subfa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 126..155
e-value: 0.059
score: 22.5
coord: 1..29
e-value: 260.0
score: 9.3
coord: 62..91
e-value: 3200.0
score: 1.2
coord: 159..189
e-value: 1.2
score: 18.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..158
score: 12.609
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 159..183
score: 8.843
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..114
e-value: 1.5E-11
score: 46.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 115..205
e-value: 3.6E-23
score: 83.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..204
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 126..188
e-value: 2.7E-11
score: 43.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 62..205
score: 28.672
NoneNo IPR availablePANTHERPTHR24126:SF44coord: 117..205
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 2..179
coord: 117..205
NoneNo IPR availablePANTHERPTHR24126:SF44coord: 2..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5512contigH-elongata_contig5512:9870..10808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5512.12918.1mRNA_H-elongata_contig5512.12918.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5512 9870..10817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5512.12918.1 ID=prot_H-elongata_contig5512.12918.1|Name=mRNA_H-elongata_contig5512.12918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
MSPLCLACAGGHEDTAIFLLTRADADPNNVAGAVAAVAAVAGGLFETNTR
GEFTDESSVRAAPSPPLLLAVEAGLVRAVRELVVRGARVDTSRAEDGWNA
LHVCASLGNAPIMRGHHRQAEERTWAGRTPLHRAALGGHTEIVLRLLVYG
VSVDPIDKDGMTPLMLAAREGHWSTARALIWEGEASVTAVADEGDTALHV
AAAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom