prot_H-elongata_contig55106.12916.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55106.12916.1
Unique Nameprot_H-elongata_contig55106.12916.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length317
Homology
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 2.080e-187
Identity = 253/308 (82.14%), Postives = 278/308 (90.26%), Query Frame = 0
Query:    1 RHRLLSTPGA-IMDFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAAGINTEGVGNHPNAWMHASMEFHNAK 307
            R +LLS P A +M+F+RTTYY+IPFWQA+DLIGKRQVY+EGGFAYVPVQRV+TIVV+R+RMGIS+SL+EASNHFAYVTSD+RFGPLLQNMSKQYLGRDFG+GDG   D I PGML+SLAERSMPLCMK LHSALNREHKLKHWGRLQYGLFLKGAGL VDDAMAFWQ MFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPY       SCLKIIMGNPP  GDHHGCPYRH+D DHL++LLSQVR+   DK AILR VK K+YQLACQRHFEATHKG+EA+G++T+GVGNHPNAWMHASMEFH  K
Sbjct:  163 RSKLLSIPAAPVMEFDRTTYYRIPFWQASDLIGKRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQNMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPY-------SCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEK 463          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 1.900e-139
Identity = 199/308 (64.61%), Postives = 237/308 (76.95%), Query Frame = 0
Query:    1 RHRLLSTPGAIM-DFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAAGINTEGVGNHPNAWMHASMEFHNAK 307
            R RLL+ PGA   +FER T+Y+IPF QA DLIG+R VY+EGG+AYVPVQRV+ IVV+RFR  +SRSL EAS  F  VT D RFGPLLQNMS+QY+GRDFG       D I P  LD++A RSMPLCM+ LH AL R+HKLKH GRLQYGLFLKGAGL ++DA AFWQ  FT++M +D F K YAYNVRHMYGKEGKRTNYTPY       SCLKIIMG  PG G+HHGCPYRHFD  HL+ L  Q+++   D+ A+  +VK ++YQLACQRHFEATH+G+E AG++ +GVGNHPNAW  ASM++  AK
Sbjct:  160 RSRLLTAPGATAAEFERCTFYRIPFAQATDLIGQRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQNMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPY-------SCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAK 460          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.000e-108
Identity = 159/293 (54.27%), Postives = 205/293 (69.97%), Query Frame = 0
Query:   16 RTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGH-EAAGINTEGVGNHPNAWMHASMEFHNAK 307
            +TT+YK+PF QA  L+  R VY+E GFAYVP+QR+++I+V+RFRM +SR+L EA+N F  V SD R GPLL+NM+KQ++G DF   +    DK++P  ++  AE +MPLCMK+LHS L REHKLKHWGRLQYGLFLKGAGL ++ A  FW+  FTK++  DQF K YAY+ RHMYGKEG R NYTPY       SC+KIIMG PP  G  HGCPYRH   + L++LLS +++   D S I    K  +YQ+ACQRHF+ TH GH     + ++ V NHPN W   S+ +H  K
Sbjct:  177 KTTFYKVPFQQALSLVSSRSVYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLKNMNKQFIGNDFTKTN-QSIDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPY-------SCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLK 461          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA)

HSP 1 Score: 329 bits (844), Expect = 6.560e-107
Identity = 160/294 (54.42%), Postives = 205/294 (69.73%), Query Frame = 0
Query:   15 ERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAAG----INTEGVGNHPNAWMHASMEFH 304
            +  TYY++PF +A DLIG+R+VY+E G+AYVP  ++ +IVVSRFR  +SRSL +AS   A   +D R GPLL N+ K  L R   D D +  + ITP  +D+LA++SMPLCM+ LH AL R+HKLKHWGR QYGLFLK AGL ++D + F+Q  FTKIM  DQF K+YAYN+RH YGKEGKRT Y+PY        C K++M   PGPG++HGCPYRHFDADHLA +LS+  +   ++S +L   K ++YQ+ACQRHFE  HK     G     N +GVGNHPNAW  AS  +H
Sbjct:  172 QTATYYRVPFLEAIDLIGRREVYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLTNVEKHDLERQDVDDDDI--EGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPY-------GCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYH 456          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.890e-105
Identity = 158/296 (53.38%), Postives = 210/296 (70.95%), Query Frame = 0
Query:   12 MDFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAAGINTEGVGNHPNAWMHASMEFHNAK 307
            ++  RT +++IPF QA DL+  RQV++EGGFAYVPV+R+++I+V+RFR  +SR L+EA     YV +D R  PL+ NM+KQY G+DF  G   G D +    LD LA+RSMP+CM+ LH  L  EHKLKHWGRLQYGLFLKGAG+G++DA+ FW+  FTKIM  D F KQYAY++RH +GKEGKR +YTP+       +C KII+G  PG G+ HGCP+RH+D  +L  LL +  V   D+  +++  K + YQLAC +HFE THKG E+  I+ +GVGNHPNA+  ASM F+  K
Sbjct:  179 VEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDF-SGTKTG-DSLDLNDLDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPF-------NCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESL-ISMDGVGNHPNAFFAASMAFYKEK 464          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN)

HSP 1 Score: 321 bits (823), Expect = 7.100e-104
Identity = 155/288 (53.82%), Postives = 197/288 (68.40%), Query Frame = 0
Query:   19 YYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYL--GRDFGDGDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAAGINTEGVGNHPNAWMHASMEFH 304
            YY++PF +A DLIG+R+VY+E G+AYVP  ++  IVV+RFR  +SRSL +AS+  A    D R  PLL N+ K  L  G+D  D D  G   I P  +D+LA++SMPLCM+ LH AL R+HKLKHWGR QYGLFLK AGL ++D + F+Q  FTKIM +D F K+YAYN+RH YGKEGKRT Y+PY        C K+IM   PGPG++HGCPY+H+D DHLA++L  + +  E   AIL   K K+YQLACQ+HFE TH          +GVGNHPNAW  AS  +H
Sbjct:  176 YYRVPFVEAIDLIGRREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLNNIEKHDLSNGKDLEDDDVEG---IHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPY-------GCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHPKAAGVAARPDGVGNHPNAWFKASRIYH 453          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA)

HSP 1 Score: 311 bits (798), Expect = 8.260e-100
Identity = 153/314 (48.73%), Postives = 218/314 (69.43%), Query Frame = 0
Query:    1 RHRLLSTPGAIM---DFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSD-ARFGPLLQNMSKQYLGRDFGDGDG-MGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRV-VGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAA-GINTEGVGNHPNAWMHASMEFHNAK 307
            R  LLS P + +   +   + +Y++PF QA DL+ KR  YV  G AYVP  R+++I+V+++RM +S+SL+ A+  F  VT +  R  PLL++M+ QYLGRD+G  D  +  D++T   +DS A++SMPLCM  LH+ + R+ KLKH GRLQYGLFLKG G+  ++ +AF+Q +FTKIM  +QF K Y+YN+RHM+G+EGKR +Y+PY       SC+KII+GNPP  G+ HGCP+RH+D   L++LL+++ V    D+SAIL   K ++YQLAC +HFE  H G  +  G++  GVGNHPNAW  AS+ +H AK
Sbjct:  187 REFLLSIPNSNVSPGELSVSVFYQVPFVQALDLVAKRLCYVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKSMNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPY-------SCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: B8CCN9_THAPS (DNA primase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCN9_THAPS)

HSP 1 Score: 306 bits (784), Expect = 1.270e-98
Identity = 154/309 (49.84%), Postives = 214/309 (69.26%), Query Frame = 0
Query:    1 RHRLLSTPGAI--MDFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSD--ARFGPLLQNMSKQYLGRDFGDG--DGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPG-DHHGCPYRHFDADHLANLLSQVRVVG-EDKSAILRYVKHKSYQLACQRHFEATHKGHEAA-GINTEGVGNHPNAWMHAS 300
            R +LLS PG+   ++F  T YY++PF QA +L+ KR+ +VE GFAYVP+ R+++IV ++FR  +S+SL  A+  F  V +D  +R GPLL++M+ QY G    +   D  G + +T   +D+LA +SMPLCM+ LH  L R+HKLKH GRLQYGLFLKGAG+ +++ M F+Q  FTKIM  +QF K YAYN+RH +GKEGKR  YTPY       +C+KII GNPP  G +HHGCPY+H+D  +L+ LL+++++ G  D+ AI+ + K  ++QLAC +HFE  H    +  GIN +GVGNHPNAW  AS
Sbjct:  135 RDKLLSVPGSPNPLEFNATEYYRVPFVQALELVSKRECFVEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVFGQVANDESSRIGPLLKSMNSQYTGPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLKGAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPY-------NCMKIIFGNPPQTGVEHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMHPAATSVEGINLDGVGNHPNAWFSAS 436          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA)

HSP 1 Score: 306 bits (784), Expect = 9.100e-98
Identity = 148/301 (49.17%), Postives = 207/301 (68.77%), Query Frame = 0
Query:   14 FERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSD-ARFGPLLQNMSKQYLGRD-FGDGDGMGT-DKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRV-VGEDKSAILRYVKHKSYQLACQRHFEATHKGHEAA-GINTEGVGNHPNAWMHASMEFHNAKVD 309
            F  T Y+ +PF QA DL+ KRQ YVE G AYVP+ ++++IV ++F   +S+SL  A   F+ VT++  R  PLL++M  QY  ++ +  G+GM    ++T   +D+ A +SMPLCM  LHS L ++HKLKHWGRLQYGLFLKGAG+ +++++ F+Q  F KI+  +QF K Y+YN+RHMYGKEGKR +YTPY       +C KII+GNPP  GDHHGCPYRH+D  HL++LL+++ +    D+ AI+ + K ++ QLAC RHFEA H    +  G+  + VGNHPNAW   S+ +H AK D
Sbjct:  190 FPTTPYFAVPFTQALDLVAKRQCYVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKSMHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPY-------NCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAKSD 483          
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Match: K0RJG2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJG2_THAOC)

HSP 1 Score: 300 bits (769), Expect = 1.610e-96
Identity = 150/316 (47.47%), Postives = 218/316 (68.99%), Query Frame = 0
Query:    1 RHRLLSTPGAI--MDFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRVITIVVSRFRMGISRSLIEASNHFAYVTSD--ARFGPLLQNMSKQYLGRDFGDGD-GMGTDKI-TPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYRQKHFVHSCLKIIMGNPPGPG-DHHGCPYRHFDADHLANLLSQVRVVGE-DKSAILRYVKHKSYQLACQRHFEATHK-GHEAAGINTEGVGNHPNAWMHASMEFHNAK 307
            R +LLS  G    ++F  T YY++PF QA +L+ +R+ YVE GFA+VP+ R+++IVV++FR+ +S+S+  A   F  V  +   R GPLL++M+ QY G    D   G+  +++ T   +D LA +SMPLCM+ LH+ L R+HKLKH GRLQ+GLFLKG+G+ +++   F+Q  FT+IM  +QF KQY+Y++RHM+GKEGKR +YTPY       +C+KIIMGNPP  G +HHGCPY+H+D  +L+ LL ++++    D+ AI+R  K  ++QLAC + FE  H      AG+N +GVGNHPNAW +AS+ +H AK
Sbjct:   99 RGKLLSVTGGPNPVEFLSTDYYRVPFVQALELVARRECYVEDGFAFVPLTRIVSIVVAKFRVSLSKSMALAVGAFGQVAHEESTRIGPLLKSMNSQYTGPSTPDAMVGLDGERVLTAATVDGLAAQSMPLCMQQLHTGLKRDHKLKHQGRLQFGLFLKGSGMSLEEHTLFFQREFTRIMTSEQFNKQYSYSIRHMHGKEGKRASYTPY-------NCMKIIMGNPPQSGVEHHGCPYKHYDDQNLSALLGKLKIGDSADRDAIMRLKKEGNFQLACAKQFEVQHPLASTVAGVNMDGVGNHPNAWFNASVSYHQAK 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55106.12916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG5_ECTSI2.080e-18782.14DNA primase large subunit n=2 Tax=Ectocarpus TaxID... [more]
A0A835YS26_9STRA1.900e-13964.61DNA primase large subunit n=1 Tax=Tribonema minus ... [more]
A0A7S3H234_9STRA1.000e-10854.27DNA primase large subunit n=2 Tax=Spumella elongat... [more]
A0A7S4A6J1_9STRA6.560e-10754.42DNA primase large subunit n=1 Tax=Pelagomonas calc... [more]
W7TRK8_9STRA1.890e-10553.38DNA primase large subunit n=2 Tax=Monodopsidaceae ... [more]
F0YER9_AURAN7.100e-10453.82DNA primase large subunit n=1 Tax=Aureococcus anop... [more]
A0A7S1ZF14_9STRA8.260e-10048.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8CCN9_THAPS1.270e-9849.84DNA primase (Fragment) n=1 Tax=Thalassiosira pseud... [more]
A0A7S2UM83_9STRA9.100e-9849.17DNA primase large subunit n=2 Tax=Attheya septentr... [more]
K0RJG2_THAOC1.610e-9647.47Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 2..89
e-value: 5.7E-19
score: 70.4
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 18..296
e-value: 1.3E-73
score: 247.7
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 13..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55106contigH-elongata_contig55106:237..3599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55106.12916.1mRNA_H-elongata_contig55106.12916.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55106 237..3599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55106.12916.1 ID=prot_H-elongata_contig55106.12916.1|Name=mRNA_H-elongata_contig55106.12916.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=317bp
RHRLLSTPGAIMDFERTTYYKIPFWQAADLIGKRQVYVEGGFAYVPVQRV
ITIVVSRFRMGISRSLIEASNHFAYVTSDARFGPLLQNMSKQYLGRDFGD
GDGMGTDKITPGMLDSLAERSMPLCMKHLHSALNREHKLKHWGRLQYGLF
LKGAGLGVDDAMAFWQGMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYT
PYRQKHFVHSCLKIIMGNPPGPGDHHGCPYRHFDADHLANLLSQVRVVGE
DKSAILRYVKHKSYQLACQRHFEATHKGHEAAGINTEGVGNHPNAWMHAS
MEFHNAKVDCYVFVFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc