prot_H-elongata_contig55089.12912.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55089.12912.1
Unique Nameprot_H-elongata_contig55089.12912.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length154
Homology
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 2.930e-33
Identity = 70/152 (46.05%), Postives = 98/152 (64.47%), Query Frame = 0
Query:    7 FSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFD---DGGEGADTCRIEVVCSRCNFKCKKVPGNIAL-DENTVPVCKDVPTGVNKDKEG-MAVDTLDLLNGYYRTSNQSQDVLECYK 153
            F  N A   GGA LHSGVLV +  S+F  NRA + GLAV SLG A NI D  F +N+++C SG+YG++      E + TCR  VVCS C   C+  PG++ + ++  VP+C+   TGV+   +G + +  L+LL GYYRTS +SQ+VL+CY+
Sbjct:  483 FEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQ 634          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FWD7_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD7_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 4.130e-29
Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 0
Query:   12 AHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECY 152
            A + GG + H+G L  M  + F SN AG+ G AV S+G  +   +V F +N+  C  GEY +D   E  D+CR E+ C+RC+  C  +P ++ + ++T+PVC ++  G      G  V TLDL  GYYRTS +SQ V+ECY
Sbjct:  225 AEISGGTIFHTGYL-GMIETVFASNEAGQDGTAVFSIGVVQQALNVTFASNTLNCPLGEYAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCLELMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECY 363          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.260e-27
Identity = 70/162 (43.21%), Postives = 88/162 (54.32%), Query Frame = 0
Query:    1 MVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDD---GGEGADTCRIEVVCSRC-NFKCKKVP----GNIALDENTVPVCKDVPTGVN-KDKEGMAVDTLDLLNGYYRTSNQSQDVLECYK 153
            +V + SF  NFA + GGALLHSGVLV +                      AEN  DV F  N+F+C  G+YG D      E ADTCR+EVVCSRC +  C+       G   L++N VP CK V  GVN     G  + TLDL +GYYRTS +S  +LEC++
Sbjct:  250 LVQDCSFQANFAALSGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYCAPGQYGSDAHFLDEEVADTCRLEVVCSRCVSSPCEDDDMLDNGISVLEDNVVPHCKAVAVGVNVSGNAGTTLQTLDLESGYYRTSAESDIILECHR 411          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 8.350e-27
Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 0
Query:   14 VQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECY 152
            + GG + H+G L  M  + F SN AG+ G AV S+G  +   +V F +N+  C  GE  +D   E  D+CR E+ C+RC+  C  +P ++ + ++T+PVC +   G      G  V TLDL  GYYRTS +SQ V+ECY
Sbjct:  468 ISGGTIFHTGHL-GMIETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECY 604          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.030e-17
Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 0
Query:    1 MVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGHAENIADVLFRNNSFFCGSGEYGFD---DGGEGADTCRIEVVCSRCNFKCKKVPGNIALDENT-VPVCKDV 116
            ++ +S F  N A    GA LHSG+LV++  ++F  NRAG  GLAV SL          F +N+++C SG+YG+D   D  E + TCR + VC+ C   C ++P ++ +  +  VP+C+ V
Sbjct:  433 IISDSWFEDNIAVGSRGAYLHSGLLVSLADTTFVGNRAGAAGLAVASLXXXXXXXXXXFESNTYYCQSGQYGYDISADEDEVSGTCRFDEVCTGCAVSCAEIPESVVVANDAFVPMCETV 552          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 2.840e-12
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   61 NNSFFCGSGEYGFD-----DGGEGADTCRIEVVCSRCNFKCKKVPGNIA--LDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECY 152
            +N F+C  GE+G +     D   GAD CR   VCSRC  +C     + A  +D  T+P C++ P G    + G  + TL++L G+YR+S  S D+ EC+
Sbjct:  513 DNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECF 611          
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 9.740e-12
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 0
Query:   62 NSFFCGSGEYGFD-----DGGEGADTCRIEVVCSRCNFKCKKVPGNIA--LDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLECY 152
            N F+C  GE+G +     D   GAD CR   VCSRC  +C       A  +D +T+P C+  P G    + G  + TL++L G+YR+S  S D+ EC+
Sbjct:  490 NDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECF 587          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55089.12912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE2.930e-3346.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWD7_ECTSI4.130e-2941.13Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FUB6_ECTSI2.260e-2743.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSF5_9PHAE8.350e-2740.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF6_ECTSI5.030e-1737.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTT9_ECTSI2.840e-1237.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE9.740e-1237.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55089contigH-elongata_contig55089:2421..3531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55089.12912.1mRNA_H-elongata_contig55089.12912.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55089 633..3612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55089.12912.1 ID=prot_H-elongata_contig55089.12912.1|Name=mRNA_H-elongata_contig55089.12912.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
MVVNSSFSGNFAHVQGGALLHSGVLVAMTHSSFESNRAGEVGLAVMSLGH
AENIADVLFRNNSFFCGSGEYGFDDGGEGADTCRIEVVCSRCNFKCKKVP
GNIALDENTVPVCKDVPTGVNKDKEGMAVDTLDLLNGYYRTSNQSQDVLE
CYK*
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