prot_H-elongata_contig55030.12907.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55030.12907.1
Unique Nameprot_H-elongata_contig55030.12907.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: D7FVD3_ECTSI (Protein phosphatase 2A regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD3_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 8.640e-89
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0
Query:   23 IQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 166
            +QAYRDSVNEVRVGASEGLQRLCKVCGADWLQEK+LPRIHGFYDESTFYLIRIAILNA KKLANGEG  ASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR
Sbjct:  443 LQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKVLPRIHGFYDESTFYLIRIAILNALKKLANGEGSAASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 586          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: A0A6U1N8A2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N8A2_9STRA)

HSP 1 Score: 155 bits (393), Expect = 9.440e-44
Identity = 78/140 (55.71%), Postives = 100/140 (71.43%), Query Frame = 0
Query:   23 IQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQAL 162
            ++AY D V EVR+ AS GLQ++  VCG D LQ+++LPRI  FY+ S FYLIRI +L A K LA    G +S L+GD+ QLVL GA D+ PNVRFTA  AL +++ H+D   V +Q+RPCLTEL Q DPD DVK+F+  AL
Sbjct:  168 LEAYTDRVAEVRLAASVGLQKILTVCGVDHLQQRVLPRIKQFYERSNFYLIRITVLLALKTLA--VDGASSALLGDITQLVLEGARDTTPNVRFTAASALADVSHHVDDATVQTQIRPCLTELAQVDPDGDVKYFAQMAL 305          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: A0A6V1NCY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCY8_HETAK)

HSP 1 Score: 159 bits (402), Expect = 6.760e-43
Identity = 75/143 (52.45%), Postives = 107/143 (74.83%), Query Frame = 0
Query:   23 IQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESI 165
            +Q+Y D V EVRVGA+ GL ++  VCGADWL++++LPRI  FY+ S FYLIRI +++A K LA  + G +  L+ +V+ ++++  HDS PNVRFT  +AL  ++ H D  AV +Q+RPCLTELMQ+D D DVKFF++QALE++
Sbjct:  441 LQSYTDRVFEVRVGATSGLSKIATVCGADWLEKQVLPRIKYFYENSNFYLIRITVIDALKTLA--QDGVSGSLMTEVVNILVKACHDSTPNVRFTGAKALALVSGHADDVAVQTQIRPCLTELMQTDTDKDVKFFASQALETV 581          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: A0A484E7S2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7S2_BRELC)

HSP 1 Score: 115 bits (288), Expect = 7.020e-27
Identity = 58/144 (40.28%), Postives = 99/144 (68.75%), Query Frame = 0
Query:   23 IQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 166
            + A+ D V EVR+ A++ L +L +  G+D++ + ++PR++  +D+S  Y  R+ +L+A K++A  +  ++S L+  ++ L +RGAHD IPNVRF A   L+++    DA  V SQVRPCLTE++ +D D DVKF+S+ AL++++
Sbjct:  441 VSAFTDMVGEVRLSATKILPKLLESLGSDFILQNVMPRLNQIFDKSVIYQERVNVLHALKQMAVEK--SSSDLLAHLMTLAIRGAHDKIPNVRFVASMTLEQLCKLADASVVASQVRPCLTEMV-NDSDMDVKFYSSIALDAVQ 581          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: K3X6N4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X6N4_GLOUD)

HSP 1 Score: 106 bits (265), Expect = 9.680e-24
Identity = 53/144 (36.81%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   23 IQAYRDSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 166
            + ++ D V EVR+ A++ L +L +  G+D++   ++PR+   +D S  Y  R+ +L+  K+LA  +   +  L+  +L L +RGA D IPNVRF A   L+++  + DA  V +QVRPCL+EL+ +D D DVK++S+ A+++++
Sbjct:  437 MSSFTDMVGEVRLSATKILPQLLEAVGSDYILHNIIPRLAQTFDRSVIYQERVNVLHGIKQLATEKA--SGELLAVMLALAVRGARDKIPNVRFVASMTLEQLCKYADASTVSTQVRPCLSELV-NDTDADVKYYSSLAMDAVQ 577          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: A0A836CRQ9_9STRA (Protein phosphatase 2A regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.500e-23
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 0
Query:   68 STFYLIRIAILNAFKKLANGEGGTAS-VLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 166
            STFYL RI IL A K L  G+G +AS  LV +V+Q++L GA D IPNVRFTA RALQ++AP L+  A+ +QV+PCLTE+ ++D D DVK+F+ QAL +I+
Sbjct:  577 STFYLHRITILCALKTLL-GDGTSASQALVAEVVQMMLTGARDPIPNVRFTAARALQDVAPCLEDAALQAQVKPCLTEMAEADVDSDVKYFATQALLTIK 675          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: F0YF12_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF12_AURAN)

HSP 1 Score: 84.3 bits (207), Expect = 6.780e-16
Identity = 52/160 (32.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:   21 GNIQAYRDSVNEVRVGASE---GLQRLCKVCGA------------DWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESI 165
            G +++++D ++EVR  A      L+ L K  GA            DWL EK+  R+   Y   ++YL RI I+ AF++LA+ +   A+  +  ++  ++ GA D +PNVRFTAV+AL+ ++ H +   V + ++P L EL+ +D D DV+ +   A+ ++
Sbjct:  527 GFVRSFQDRISEVRTSAVAVLGELRALKKPDGATGLPTDEALFDGDWLMEKIGKRLSELYLTMSYYLYRITIVAAFERLAHDD--VAAEHMETIVLFLVDGARDDVPNVRFTAVKALETVSLHANDRLVANFIKPVLNELLANDTDADVRNYVKGAIAAL 684          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: C5KXK0_PERM5 (Serine/threonine protein phosphatase 2a regulatory subunit a, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KXK0_PERM5)

HSP 1 Score: 75.9 bits (185), Expect = 6.400e-13
Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 0
Query:   28 DSVNEVRVGASEGLQRLCKVCGADWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLAN--GEGGTASVLVGDVLQLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESIR 166
            D V  VRV A+E L  L    G  W  E ++P +      S  YL R+  L     +AN   E   A  L+     LV     DS+ NVRF   + L+ +   +    V  ++ P L +L Q D D+DV+FFSA ALE +R
Sbjct: 1007 DPVYSVRVAATENLANLSVAMGTSWAVENIIPHLQELSKNSN-YLYRMTALMGVVSMANVLDEKACAEFLMPLPRSLV----QDSVANVRFNVAKTLKSITSRVPRRTVQHEILPILQKLAQRDTDEDVRFFSANALEDLR 1142          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: UPI001ED8AEC8 (serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8AEC8)

HSP 1 Score: 60.5 bits (145), Expect = 1.260e-7
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  107 AHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALESI 165
            A+D++PNVRF   + LQ++AP LD  ++  QV+P L  L  SD DDDVK+F+++A+  I
Sbjct:  531 ANDNVPNVRFNVAKTLQKIAPILDQSSIQIQVKPVLDRL-NSDADDDVKYFASEAIAGI 588          
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Match: A0A6A7G5X8_9CRUS (Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5X8_9CRUS)

HSP 1 Score: 54.3 bits (129), Expect = 1.710e-5
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  103 VLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDPDDDVKFFSAQALE 163
            +L    D I NVRF A +AL  + P+L++  V++++ P L  L QSD DDDV+FF+A+ L+
Sbjct:  567 ILLALEDKITNVRFAAAKALVGLIPYLESSVVETKLIPVLKSL-QSDTDDDVRFFTAETLK 626          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55030.12907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FVD3_ECTSI8.640e-8996.53Protein phosphatase 2A regulatory subunit n=2 Tax=... [more]
A0A6U1N8A2_9STRA9.440e-4455.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1NCY8_HETAK6.760e-4352.45Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A484E7S2_BRELC7.020e-2740.28Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
K3X6N4_GLOUD9.680e-2436.81Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A836CRQ9_9STRA1.500e-2357.00Protein phosphatase 2A regulatory subunit n=1 Tax=... [more]
F0YF12_AURAN6.780e-1632.50Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
C5KXK0_PERM56.400e-1334.75Serine/threonine protein phosphatase 2a regulatory... [more]
UPI001ED8AEC81.260e-747.46serine/threonine-protein phosphatase 2A 65 kDa reg... [more]
A0A6A7G5X8_9CRUS1.710e-544.26Serine/threonine-protein phosphatase 2A 65 kDa reg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13646HEAT_2coord: 68..162
e-value: 1.1E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR10648:SF4PROTEIN PHOSPHATASE 2 (FORMERLY 2A), REGULATORY SUBUNIT A, BETA ISOFORM-RELATEDcoord: 25..162
NoneNo IPR availablePANTHERPTHR10648SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNITcoord: 25..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.593
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 20..166
e-value: 7.8E-32
score: 112.7
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 99..137
score: 9.253
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 138..166
score: 9.056
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 24..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55030contigH-elongata_contig55030:536..1491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55030.12907.1mRNA_H-elongata_contig55030.12907.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55030 3..2517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55030.12907.1 ID=prot_H-elongata_contig55030.12907.1|Name=mRNA_H-elongata_contig55030.12907.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
MIATLVFSIYMLFSSVTYPLGNIQAYRDSVNEVRVGASEGLQRLCKVCGA
DWLQEKLLPRIHGFYDESTFYLIRIAILNAFKKLANGEGGTASVLVGDVL
QLVLRGAHDSIPNVRFTAVRALQEMAPHLDAGAVDSQVRPCLTELMQSDP
DDDVKFFSAQALESIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR021133HEAT_type_2
IPR016024ARM-type_fold