prot_H-elongata_contig54996.12904.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54996.12904.1
Unique Nameprot_H-elongata_contig54996.12904.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length267
Homology
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: D8LCY5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY5_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 7.590e-115
Identity = 195/287 (67.94%), Postives = 220/287 (76.66%), Query Frame = 0
Query:    1 RDGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKSGEGVTRGYGLAALANACAHPVLAGRAKELGALELLRICL----------------DRPVDFHVGRFQQTKTAFARLNGIGPGAG------DLEEGG 265
            RDGS  LPA+QKLLQLAYSED D+QL+AVMGISKMIER    + SSFGPLCHTLSRLAAS+ RA+VAYAARGIK+LVL+D LR QATVAGIPSVLAAALREWEDD PCLRE+LGALQTLC D ATVL VV+AG L  VLELLD++++ELR+LATA AANVL++SDSLLLTN+ECID  SD M  LL+AVKS +G  R YGLAALANACAHPVLAG AKELGALELLR                    R +    G+ Q+ +TA ARLNG G G        D+EEGG
Sbjct:   13 RDGSIALPALQKLLQLAYSEDTDQQLQAVMGISKMIER-HPADASSFGPLCHTLSRLAASEHRAVVAYAARGIKLLVLNDALRPQATVAGIPSVLAAALREWEDDAPCLREILGALQTLCCDAATVLPVVDAGALASVLELLDTSNMELRVLATAIAANVLSFSDSLLLTNEECIDGISDSMGILLDAVKSRDGAIRDYGLAALANACAHPVLAGCAKELGALELLRRNFLQDKVSTEASGRWRGGGRLLRSRFGQRQKAETAVARLNGAGFGGDGXXXXXDVEEGG 298          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A6H5L7F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F5_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 4.060e-91
Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0
Query:    1 RDGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKS 191
            RDGS  LPA+QKLLQLAYSED D QL+AVMGISKMIER +  + SSFGPLCHTLSRLAAS+ RA+VAYAARGIK+LVL+D LR QATVAGIPSVLAAALREWEDD PCLREVLGALQTLC D ATVL VV+AG L  VLELLD++++E+R+LATATAANVL++SDSLLLTN+ECID  SD M  LL+AVKS
Sbjct:   13 RDGSIALPALQKLLQLAYSEDTDHQLQAVMGISKMIER-QPADASSFGPLCHTLSRLAASEHRAVVAYAARGIKLLVLNDALRPQATVAGIPSVLAAALREWEDDAPCLREVLGALQTLCCDAATVLPVVDAGALASVLELLDTSNMEVRMLATATAANVLSFSDSLLLTNEECIDGVSDSMGVLLDAVKS 202          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: D8LCY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY3_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 4.840e-88
Identity = 150/234 (64.10%), Postives = 181/234 (77.35%), Query Frame = 0
Query:    1 RDGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKSGE--GVTRGYGLAALANACAHPVLAGRAKELGALELLRICLDR 232
            RD  ++LPA+Q LLQLA++ D D Q +A MGIS M++R R +  SSFGPLCHTLSRL AS+ +A+VAYAAR IKILVLDD LR QA  AGIPSVLA AL+  E DT CLRE+LGALQTLCYD  TVL+V+  G LG VLELL + +LEL+IL+ A AANVL++SDSLL+T++ECIDAF D ME+LL+ VKS     + R   LAALANAC H VLA RAK+LGA+ELLR  L +
Sbjct:   14 RDAPTLLPALQNLLQLAHAGDTDDQAQAAMGISTMVKRVR-IEPSSFGPLCHTLSRLVASEHQAVVAYAARSIKILVLDDALRPQAAAAGIPSVLATALKVREGDTACLREILGALQTLCYDKETVLSVITTGALGSVLELLSTGNLELKILSMAIAANVLSFSDSLLMTHEECIDAFRDRMEALLDPVKSRRFNDMERDLALAALANACGHRVLAERAKDLGAIELLRRVLKK 246          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A6H5JCG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG7_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.740e-83
Identity = 155/270 (57.41%), Postives = 190/270 (70.37%), Query Frame = 0
Query:    1 RDGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKS--GEGVTRGYGLAALANACAHPVLAGRAKELGALELLRICL--DRPVDFHVGRFQQTKTAFARLNGIG-PGAGDLEEGG 265
            RD  ++LP++Q LLQL++S D D Q++A MGIS M++R R +  SSFGPLCHTLSRL AS+ +A+VAY+AR IKILV+DD LR QA  AGIPSVLA AL+  E DT CLRE+LGALQTLCYD  TVL+V+  G L  VLELL +++LEL+IL+ A AANVL++SDSLL  ++ECIDAF D ME+LL+ VKS     + R   LAALANAC H VLA RA  LGA+ELLR  L   R     V R      +  RL   G    GD+E GG
Sbjct:   14 RDAPTLLPSLQNLLQLSHSGDTDDQVQAAMGISAMVKRVR-IEPSSFGPLCHTLSRLVASEHQAVVAYSARSIKILVVDDALRPQAAAAGIPSVLATALKVREGDTACLREILGALQTLCYDMETVLSVITTGALESVLELLSTSNLELKILSMAIAANVLSFSDSLLTAHEECIDAFRDRMEALLDPVKSHRSNDMERDVALAALANACGHRVLAERAMYLGAIELLRKVLKNSRNRILDVARTNVVSASLTRLERHGFIAGGDVEAGG 282          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A7S2S7X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7X2_9STRA)

HSP 1 Score: 172 bits (436), Expect = 5.540e-48
Identity = 106/250 (42.40%), Postives = 148/250 (59.20%), Query Frame = 0
Query:   10 VQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELL--DST-------------------------------DLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKSGEGVTRGYGLAALANACAHPVLAGRAKELGALELL 226
            +Q LL+L++S D  +Q +A + +S+++E        SFGPL H L RL  ++ R + A++AR IK+L+LDD LR QA  AG+P VL  ALR WE +  C RE+LGALQTLC+D A VL VV AGV   ++++L  DS                                + E  +LA  T AN+LAYSDS+LLT +E +   +  + +LL+  +  +   R YG+AALANA AHPVLAG+ KELG L++L
Sbjct:   24 LQHLLKLSHSTDLGEQQKAALELSRLVET-TVFPAVSFGPLAHALCRLVPNENRNVAAHSARAIKLLLLDDALRPQAVAAGMPLVLVEALRRWEGEVSCSREILGALQTLCWDKACVLRVVEAGVTTILVDMLAGDSRREDPEEGEGRRSSSIDDEQGFASRGARQRQREAEAVLLAAVTLANILAYSDSVLLTKEEIVLDAARALPALLDLCQGRDKARRCYGVAALANATAHPVLAGKVKELGGLKVL 272          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A835YQZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ0_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.240e-44
Identity = 103/238 (43.28%), Postives = 135/238 (56.72%), Query Frame = 0
Query:    5 SILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTD-------------LELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKSGEGVT--RGYGLAALANACAHPVLAGRAKELGALELLR 227
            S L  VQ+LL LA SE P  Q +A + +S + E  R    +SF PL H L RL     RA  AYAAR +K+  LDD  R  A  +G+P+VL AALR+W ++ PCLREVLGALQTLC++ A+  AVV+ G + P+LELL +                          AN+LA++D++ LT++ CI+AF D ME +L    S       R +  AALAN  AHPVLA R + L A   LR
Sbjct:   58 SDLAKVQRLLNLALSESPIDQHKAAVELSTLAE-SRPFAPASFAPLSHALCRLIPGGGRATAAYAARAVKLFALDDAFRELAASSGLPAVLVAALRQWSEEPPCLREVLGALQTLCWEQASARAVVDGGGVEPLLELLRAPGGARAGXXXXXXXXXXXXXXXXXXXANLLAFADTVFLTDEACINAFFDAMEDILEGAVSAHATAALRLHCAAALANGAAHPVLAARLRGLKAAPALR 294          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A7S3H243_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H243_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.610e-44
Identity = 93/227 (40.97%), Postives = 138/227 (60.79%), Query Frame = 0
Query:    2 DGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELRILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVK-SGEGVTRGYGLAALANACAHPVLAGRAKELGALELLR 227
            DGS     +Q LL L+ SE+P+ Q +A + ++K++  G      S+GPL H L +L  S+ R + +Y+AR +KIL+LDD LR     AGIP+V+  A+R+WED+  CLRE+LGALQTL +D   V +V+   V+  ++    +TD E+ +LA AT AN+L+YSD+LLL +    +     M  L+  +K S +   R Y  AA+ANA  +P LA    + G L+L R
Sbjct:    3 DGSCSSSTLQHLLTLSISENPEDQQKAAVDLAKLVN-GSVFPAYSYGPLSHALCKLIPSNNRTVASYSARALKILLLDDALRQLTVAAGIPAVVCTAVRQWEDEILCLRELLGALQTLTWDKQCVKSVLQTDVISNLILYATATDQEVSVLALATLANILSYSDTLLLADYPTTETLGAGMSVLIETLKGSSQKPQRLYAAAAIANASFNPRLAELLNKHGGLQLCR 228          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: A0A482SVR1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR1_9ARCH)

HSP 1 Score: 115 bits (289), Expect = 1.360e-28
Identity = 62/132 (46.97%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    3 GSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVVNAGV 134
            GSS    +Q LL+L+YSE+   Q +A + +SK+++ G      SFGPL H L RL  S  R + +YAAR +KIL+LDD LR QA VAG+P+V+  A+++WE++  CLRE+LGALQTL +D   V  V+   +
Sbjct:    9 GSSF-STLQHLLKLSYSENSADQQKAAIELSKLVD-GTVFPAVSFGPLAHALCRLVPSLNRTVSSYAARALKILILDDALRPQALVAGVPAVVCVAIKQWEEEVLCLRELLGALQTLTWDKQCVKGVLQCDI 138          
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Match: W7TLY9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLY9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.620e-22
Identity = 52/121 (42.98%), Postives = 79/121 (65.29%), Query Frame = 0
Query:   10 VQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPLCHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALREWEDDTPCLREVLGALQTLCYDHATVLAVV 130
            V++++ LA+S+D   Q +A   ++ +I         SF P+ H L RL  S  R +V +AAR  K L+LDD LR QA + G+P+VL  AL+ W+++TPCLRE+LG+LQTL +D  TV +++
Sbjct:   28 VKRIVSLAHSQDVADQQKAATDLNTLIGGNAFFPMISFAPMAHALCRLLPSHDRTVVYFAARAAKTLLLDDALRGQAVLVGLPAVLLQALQTWQEETPCLREILGSLQTLSWDKHTVKSLI 148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54996.12904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCY5_ECTSI7.590e-11567.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7F5_9PHAE4.060e-9178.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCY3_ECTSI4.840e-8864.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCG7_9PHAE1.740e-8357.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2S7X2_9STRA5.540e-4842.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YQZ0_9STRA2.240e-4443.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3H243_9STRA2.610e-4440.97Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482SVR1_9ARCH1.360e-2846.97Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W7TLY9_9STRA1.620e-2242.98Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 8..236
e-value: 2.2E-18
score: 68.4
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54996contigH-elongata_contig54996:263..3467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54996.12904.1mRNA_H-elongata_contig54996.12904.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54996 263..3467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54996.12904.1 ID=prot_H-elongata_contig54996.12904.1|Name=mRNA_H-elongata_contig54996.12904.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp
RDGSSILPAVQKLLQLAYSEDPDKQLEAVMGISKMIERGRHVNGSSFGPL
CHTLSRLAASDQRAIVAYAARGIKILVLDDTLRSQATVAGIPSVLAAALR
EWEDDTPCLREVLGALQTLCYDHATVLAVVNAGVLGPVLELLDSTDLELR
ILATATAANVLAYSDSLLLTNKECIDAFSDCMESLLNAVKSGEGVTRGYG
LAALANACAHPVLAGRAKELGALELLRICLDRPVDFHVGRFQQTKTAFAR
LNGIGPGAGDLEEGGDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold