prot_H-elongata_contig54995.12903.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54995.12903.1
Unique Nameprot_H-elongata_contig54995.12903.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: D7FK70_ECTSI (tRNA-splicing endonuclease positive effector n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK70_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.930e-47
Identity = 107/194 (55.15%), Postives = 115/194 (59.28%), Query Frame = 0
Query:    3 QVEDVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPS-------------------------GGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEAELLTA 171
            + EDVGIITPYSAQVRLLQDVVG SRRS                                              GGR++GG G                       +PEIASVDGYQGREKEVI+LSAVRSN  GRVGFL+DWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFL+WCE+RGA M EA L  A
Sbjct:  647 EAEDVGIITPYSAQVRLLQDVVGTSRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRKRGGVG-----------------------LPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASLYVA 817          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A6H5KWY8_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY8_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 9.400e-47
Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 0
Query:   76 GESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEAEL 168
            G  + G  +PEIASVDGYQGREKEVI+LSAVRSN  GRVGFL+DWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFL+WCE+RGA M EA L
Sbjct:   32 GRKRGGIGLPEIASVDGYQGREKEVIILSAVRSNRGGRVGFLADWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLQWCERRGAAMGEASL 124          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A835Z7U9_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U9_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.070e-34
Identity = 64/86 (74.42%), Postives = 71/86 (82.56%), Query Frame = 0
Query:   86 EIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEAELLTA 171
            E+ SVDGYQGREKEVIVLSAVRSN  G VGFLSDWRRLNVAITRARRGVV+VGDP TL  D HWRA++ WC + GA+M E +L  A
Sbjct:  248 EVRSVDGYQGREKEVIVLSAVRSNRCGAVGFLSDWRRLNVAITRARRGVVIVGDPATLSHDAHWRAYIAWCAENGALMTERDLRRA 333          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A150G7F3_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7F3_GONPE)

HSP 1 Score: 127 bits (319), Expect = 1.080e-30
Identity = 80/160 (50.00%), Postives = 100/160 (62.50%), Query Frame = 0
Query:    6 DVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEE 165
            D+GIITPY+ QVR LQ ++    R    +    AA       S+P+            L   +  G A + ++     + EI SVDG+QGREKEVIV SAVRSN +GR+GF+SD RRLNVAITRA+RG+VVVG+PDTL  DR W  +LRW E RG VMEE
Sbjct:  859 DIGIITPYNGQVRCLQQLLTRGSRLPRSSAGGGAARPASFLRSSPA------------LDDDDAPGAAAREDA-----VLEIKSVDGFQGREKEVIVFSAVRSNPDGRLGFVSDPRRLNVAITRAKRGLVVVGNPDTLSTDRLWTRWLRWVESRGCVMEE 1001          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A2K3DEK9_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DEK9_CHLRE)

HSP 1 Score: 126 bits (317), Expect = 2.040e-30
Identity = 82/165 (49.70%), Postives = 101/165 (61.21%), Query Frame = 0
Query:    4 VEDVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEAEL 168
            V D+G+ITPY+ QVR LQ ++  +R S       V        GS P   R             ++ G  G G  +   V+ EI SVDG+QGREKEVIV SAVRSN  GR+GF+SD RRLNVAITRA+RG+VVVG+PDTL  DR W  +LRW E +G VM+E  L
Sbjct:  982 VGDIGVITPYNGQVRCLQQLL--TRGSRLSRGLGV--------GSRPGAFRRAA-----PSMEGDDDGAGGSGGGRAEPVL-EIKSVDGFQGREKEVIVFSAVRSNPEGRLGFVSDPRRLNVAITRAKRGLVVVGNPDTLMVDRLWARWLRWAEAQGCVMQEGGL 1130          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A7S3QXW0_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QXW0_DUNTE)

HSP 1 Score: 124 bits (311), Expect = 1.260e-29
Identity = 81/165 (49.09%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    2 RQVEDVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEA 166
            R +ED+GII+PY  QVR LQ V+G                 + S G    GG     DG  D +  E+   A  G S    +  EI SVDG+QGREKEVI+ S VRSN  G VGFLSD+RRLNVAITRA+RG++VVG+P+TLK D+ W A+LRW  Q  A M  A
Sbjct:  782 RGLEDIGIISPYQGQVRHLQQVLGP----------------LSSSGRFGRGGSR---DGDADGFTSED---AATGSSMASLL--EIRSVDGFQGREKEVIIFSTVRSNTTGSVGFLSDYRRLNVAITRAKRGLIVVGNPETLKSDKTWSAWLRWAAQHQAWMRGA 922          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: W7TMD0_9STRA (Regulator of nonsense n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMD0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.390e-29
Identity = 75/163 (46.01%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    6 DVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVMEEAEL 168
            DVGI+TPYSAQV+ + ++  A  R                   NP           GDL                     EI SVD YQGREKE+IV+SAVRSN +G+VGFL DWRRLNVAITRA+RG+VV+GDP TL+ D HW A+L+W  + G VM   EL
Sbjct:  878 DVGIVTPYSAQVKHVTELAQARLRHF-----------------NP-----------GDL---------------------EIQSVDAYQGREKELIVMSAVRSNKHGKVGFLGDWRRLNVAITRAKRGLVVLGDPRTLRHDPHWSAYLKWAYKHGCVMTVGEL 991          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A2E7AWI0_9EURY (AAA domain-containing protein n=4 Tax=unclassified Euryarchaeota TaxID=115531 RepID=A0A2E7AWI0_9EURY)

HSP 1 Score: 121 bits (304), Expect = 9.480e-29
Identity = 76/155 (49.03%), Postives = 93/155 (60.00%), Query Frame = 0
Query:    6 DVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRG 160
            D+GIITPYS QVR L D+  +++                        GRE+GG     L+A    GL             EI +VDGYQGREK+VI+ SAVRSN +G VGFLSD RRLNVAITRA+RG+VVVGDP TL+ D  WR++L W E+RG
Sbjct:  558 DIGIITPYSGQVRALSDIFDSNK------------------------GREQGG-----LFA----GL-------------EINTVDGYQGREKDVIIFSAVRSNSDGVVGFLSDQRRLNVAITRAKRGLVVVGDPQTLRYDPTWRSWLEWAEERG 666          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A8J4D8K7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D8K7_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 2.110e-28
Identity = 76/169 (44.97%), Postives = 101/169 (59.76%), Query Frame = 0
Query:    6 DVGIITPYSAQVRLLQDVV----------GASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVME 164
            D+G++TPY+ QVR LQ ++          G   R  +   A  AA++  S                      +E+GL     S++G V+ EI SVDG+QGREKEVIV S VRSN  GR+GF++D RRLNVAITRARRG+VV+G+PDTL +DR W  +L+W   RG V+E
Sbjct: 1012 DIGVVTPYNGQVRCLQQLLTNGSRLSRGLGQGARPGSFLRATTAATAAAS---------------------SDEEGL-----SREGAVL-EIKSVDGFQGREKEVIVFSTVRSNPAGRLGFVADGRRLNVAITRARRGLVVLGNPDTLAKDRLWARWLQWVASRGCVLE 1153          
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Match: A0A8J4EPH7_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EPH7_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 2.110e-28
Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    6 DVGIITPYSAQVRLLQDV-VGASRRSVAKADADVAASSVPSPGSNPSGGREKGGDGGGDLYACEEQGLAG---KGESKKGTVMPEIASVDGYQGREKEVIVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWRAFLRWCEQRGAVME 164
            D+GI+TPY+ QVR LQ + V  SR S                      G  +G   G  L A     +A    +G S++G V+ EI SVDG+QGREKEVIV S VRSN  GR+GF++D RRLNVAITRARRG+VV+G+PDTL +DR W  +LRW   +G ++E
Sbjct: 1019 DIGIVTPYNGQVRCLQQLLVNGSRLSR---------------------GLGQGARPGSFLRATTTTAVASSDDEGLSREGAVL-EIKSVDGFQGREKEVIVFSTVRSNPAGRLGFVADGRRLNVAITRARRGLVVLGNPDTLAKDRLWARWLRWVASKGCILE 1159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54995.12903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK70_ECTSI4.930e-4755.15tRNA-splicing endonuclease positive effector n=1 T... [more]
A0A6H5KWY8_9PHAE9.400e-4782.80AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z7U9_9STRA3.070e-3474.42AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A150G7F3_GONPE1.080e-3050.00Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A2K3DEK9_CHLRE2.040e-3049.70Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A7S3QXW0_DUNTE1.260e-2949.09Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
W7TMD0_9STRA4.390e-2946.01Regulator of nonsense n=2 Tax=Monodopsidaceae TaxI... [more]
A0A2E7AWI0_9EURY9.480e-2949.03AAA domain-containing protein n=4 Tax=unclassified... [more]
A0A8J4D8K7_9CHLO2.110e-2844.97Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A0A8J4EPH7_9CHLO2.110e-2847.85Uncharacterized protein n=1 Tax=Volvox africanus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 4..140
e-value: 3.6E-32
score: 111.6
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 5..170
NoneNo IPR availablePANTHERPTHR10887:SF463coord: 5..170
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54995contigH-elongata_contig54995:723..1783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54995.12903.1mRNA_H-elongata_contig54995.12903.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54995 47..1783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54995.12903.1 ID=prot_H-elongata_contig54995.12903.1|Name=mRNA_H-elongata_contig54995.12903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MRQVEDVGIITPYSAQVRLLQDVVGASRRSVAKADADVAASSVPSPGSNP
SGGREKGGDGGGDLYACEEQGLAGKGESKKGTVMPEIASVDGYQGREKEV
IVLSAVRSNHNGRVGFLSDWRRLNVAITRARRGVVVVGDPDTLKRDRHWR
AFLRWCEQRGAVMEEAELLTASANKCRSSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA
IPR027417P-loop_NTPase