prot_H-elongata_contig54970.12897.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54970.12897.1
Unique Nameprot_H-elongata_contig54970.12897.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig54970.12897.1 vs. uniprot
Match: D7G949_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G949_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 3.550e-33
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0 
Query:    3 ESAEDEAAMEYLKWELHGKFMAFPGEHYHNLLSCLASEIYHNRYPVEHGVDVLHAVMREAGPGASQ 68
            E+ ED AAMEYLKWELHGKFMAFPGEHYHNLL+ LASEIYHNRYPVEHG+D+LH VMR+AGP A Q
Sbjct:   51 ETPEDLAAMEYLKWELHGKFMAFPGEHYHNLLANLASEIYHNRYPVEHGIDILHGVMRDAGPEALQ 116
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BLAST of mRNA_H-elongata_contig54970.12897.1 vs. uniprot
Match: A0A6H5JHB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB5_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 4.090e-30
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0 
Query:    3 ESAEDEAAMEYLKWELHGKFMAFPGEHYHNLLSCLASEIYHNRYPVEHGVDVLHAVMREAGPGASQ 68
            E+ ED AAMEYLKWELHGKFMAFPGEHYHNLL+ LASEIYHNRYPVEHG+D+LH VMR+AGP A Q
Sbjct:  419 ETPEDLAAMEYLKWELHGKFMAFPGEHYHNLLANLASEIYHNRYPVEHGIDILHGVMRDAGPEALQ 484
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54970.12897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G949_ECTSI3.550e-3383.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHB5_9PHAE4.090e-3083.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54970contigH-elongata_contig54970:42..653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54970.12897.1mRNA_H-elongata_contig54970.12897.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54970 42..653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54970.12897.1 ID=prot_H-elongata_contig54970.12897.1|Name=mRNA_H-elongata_contig54970.12897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MPESAEDEAAMEYLKWELHGKFMAFPGEHYHNLLSCLASEIYHNRYPVEH
GVDVLHAVMREAGPGASQ
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