prot_H-elongata_contig54947.12895.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54947.12895.1
Unique Nameprot_H-elongata_contig54947.12895.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 1.320e-59
Identity = 91/147 (61.90%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    1 MGHIRGLEPWDYRHPGEDFEFSGVRSTIYILGLIAVVFFVSWHFARAYMTLEGTLLISGPKSDMPKPENNLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLRFAGC 147
            +G I GLE WD  + G+DFEFS +RSTI++ GLIA V  V+WHFARA++TL G  L+SG     P P+ +LH  Y+ SR+V++ W ILFT F+I++D+GFDYRGALLAW+LSL+AVFP PVS  WL V TGIFLQGIG+NRLRF GC
Sbjct:   95 LGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEP-PKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGC 240          
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 2.540e-20
Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 0
Query:   28 IYILGLIAVVFFVSWHFARAYMTLEGTLLISGPKSDMPKPENNLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSN 140
            I+I+ LI  V  +  HFA A+  L G  LISG      +   +L + Y  SRM+++ + IL+  F +  D+G+ Y+  LLAWVLSL A F   +S+FWLAVTTG+FLQGIG+ 
Sbjct:  150 IFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIGNQ 262          
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 9.570e-19
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 0
Query:   18 DFEFSGVRSTIYILGLIAVVFFVSWHFARAYMTLEGTLLISGPKSDMPKPENNLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLRF 144
            D+  S +   + ++  + V+  V++HFA A+ TL G   +SG  +     E NLH  Y  SR ++V +A+L+  F   + +G      LLAWVLSL A F    S+ WLA+ TG+F+QG GS RLRF
Sbjct:  139 DWRDSHIVMAVVLITFVLVI--VAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRF 263          
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 8.040e-17
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0
Query:   15 PGEDFEFSGVRSTIYILGLIAVVFFVSWHFARAYMTLEGTLL----ISGPKSDMPKPEN--NLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLR 143
            PG +   +    +I +L L+A+VF  ++H+  A+  L G  L    +SG  ++ P P    N +  Y  S  V++V+ +LF+ F  +  + +DY   LLAW++SL+A F   +S+ WL +TTG+FLQG+G+   R
Sbjct:   12 PGGELSPAEAALSIILLVLVALVF--AYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFR 144          
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.850e-16
Identity = 47/135 (34.81%), Postives = 78/135 (57.78%), Query Frame = 0
Query:   15 PGEDFEFSGVRSTIYILGLIAVVFFVSWHFARAYMTLEGTLL----ISGPKSDMPKPEN--NLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLR 143
            PG D   +    +I +L L+A+VF  ++H+  A+  L G  L    +SG  ++ P P    N +  Y  S  V++++ +LF+ F  +  + +DY   LLAW++SL+A F   +S+ WL +TTG+FLQG+G+   R
Sbjct:  140 PGGDLSPAEAALSIILLILVALVF--AYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFR 272          
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Match: A0A6H5JIF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.170e-13
Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 0
Query:   33 LIAVVFFVSWHFARAYMTLEGTLLISGPKSD-----MPKPENNLHATYTGSRMVLVVWAILFTCFLITDDNGFDYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLRF 144
            +IAV     +HF  A+ TL G ++ISG  S       P    N  A Y  + +++  +  L   F+    + ++Y   LLAWV+SL+A+F  P S+ WL VTTG FLQG+G+   +F
Sbjct:  128 VIAVGLAFVYHFFVAWTTLPGAVMISGGVSTPEDATAPVRSGNRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54947.12895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDF3_ECTSI1.320e-5961.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF2_ECTSI2.540e-2045.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1P1_ECTSI9.570e-1939.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1N8_ECTSI8.040e-1734.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMR1_9PHAE8.850e-1634.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIF9_9PHAE1.170e-1336.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54947contigH-elongata_contig54947:1756..2205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54947.12895.1mRNA_H-elongata_contig54947.12895.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54947 277..2421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54947.12895.1 ID=prot_H-elongata_contig54947.12895.1|Name=mRNA_H-elongata_contig54947.12895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MGHIRGLEPWDYRHPGEDFEFSGVRSTIYILGLIAVVFFVSWHFARAYMT
LEGTLLISGPKSDMPKPENNLHATYTGSRMVLVVWAILFTCFLITDDNGF
DYRGALLAWVLSLLAVFPVPVSLFWLAVTTGIFLQGIGSNRLRFAGCDP*
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