prot_H-elongata_contig54922.12889.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54922.12889.1
Unique Nameprot_H-elongata_contig54922.12889.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length886
Homology
BLAST of mRNA_H-elongata_contig54922.12889.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 3.560e-79
Identity = 277/766 (36.16%), Postives = 344/766 (44.91%), Query Frame = 0
Query:   72 DVEAETQRLISLPTIDIKLELQMRGVEHRDLFEKVELARRLAESRASSSCSQSNPAPP--------------VRILGRARDYVGGETT--SDGSGESKGRLPRSEVAEISAPPSFPDGEARKEGELDELHARDVSRAIRLGKQALTRELNVMGIMHSRLSSLTFLAGQYANGRRDARAALRSFPEPSGTDEADKKVRRKQGRDPVLDRWTKGAEWGGKGATDSARASRGLRKGDSIEEEGGTEVTIQPSDGRGGGYLGRKSARAAGMRTGQENDRFEMDRSADGNADVEITVRRDGAASLRRRETSLQARADSMSSRELMSTLDALGVRYRIPAPRVELQATFVSAVLESRYGNGDRDAANARDAGQKTPKVQRSRSGIVSLDPYAGEEGEVEEELRRV-GFDSYNSALRWARQLTFDDVLDELGSRGLQHDPKAGFGSLTRTLAEEVLAEDKLLDDV---DTKVAQESELEQAVTMSAQEIIRSLREGGEQVDATSSQEELAEKFVAMNLRQRGASRAGSDWSRRQDQTDPYGEGENSNSQPRREDRWRGGKGNGNRRNDRESSSLSAEISDWSRLGDEGRDSAGGGTLLELEEAVRSVGGAVWRTARETGSLFGDTAAGLFPEVFPEGEAVGAPTTAGVSGDRGRY------------REGGAAARARSVRGRAGGARRAAASFAQSSANRAGLAVTRSAANGFLRGAEAAADWAGGGALAREYVLLIVAGFS-------------------GRIALQRLVTEG 786
            DV  ET+RL+S+PTIDIKLELQMRGVEHRD FEK +LARRLAE+R S  C  +NP+P                  LG A  +   E+   S+ +  + G  P++  A  +A P+   G A  +G     +ARDV+R  R+GK AL RELN MGI HSRLS ++ LA QYA  R++AR   R FP  S  D                            G+                                             G  T                   ++          R R+ +L ARAD +SSRELM  LDALG +YRIPAPR ELQ  FVSAVL +      +  A A  +G +          IV + PY     E +  LR   GF +Y+SALRWARQL FDDVLDEL  RG++H P+A +  LTR LA+EVLA+++L+      +   A  +ELE A++MSAQE+IR LR GGE  D T S+E LAE+   M LR RG     S              G +                          S+   E +D       GR    G  LLELEEA +SVGG                                                          +E   + + R+ R RAGG RRAA  +AQSS NRAG AV +S ANG LRGAEAAADWAG GALAREYVLL +A F                    GRIA Q+LV EG
Sbjct:  121 DVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVS--CCGNNPSPSHDXXXXXXXXXXXXXXXLGGAAAHGPRESAHRSNKASTTTGNEPQAAAA--TAVPTEGRG-AASDGCSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPPSSALD----------------------------GSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGWSTRANXXXXXXXXXXXXXXXXDME---------RSRKAALHARADRLSSRELMKALDALGAQYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGSRG-------ENIVPVSPYDAPLEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELKYRGVEHSPRADYSYLTRLLADEVLADEELMGGEGGPEGADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHS--------------GSSXXXXXXXXXXXXXXXXXXXXXXXXXXSTEGREPADPL-----GRRDGDGDVLLELEEAAKSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREYVLLFIAAFCLVFKRGVGAAVALLVVIRFGRIAAQKLVLEG 818          
BLAST of mRNA_H-elongata_contig54922.12889.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.540e-72
Identity = 313/937 (33.40%), Postives = 389/937 (41.52%), Query Frame = 0
Query:   27 PLFGAAET---AADGHAADGSRTSVAPSYISNSGGGNGDDFHTSLDPDDVEAETQRLISLPTIDIKLELQMRGVEHRDLFEKVELARRLAESRASSSCSQSNPAPPVRILGR----------ARDYVGGETTSDGSGESKGRLPRS------EVAEISAPPSFPDGE-ARKEGELDELHARDVSRAIRLGKQALTRELNVMGIMHSRLSSLTFLAGQYANGRRDARAALRSFPEPSGTDEADKKVRRKQGRDPVLDRWTKGAEWG-----------GKGATDSARASRGLRKGDSIEEEGGTEVTIQPSDGRGGGYLGRKSARAAGMRTGQENDRFEMDRSADGNADVEITVRRDGAASLRR-RETSLQARADSMSSRELMSTLDALGVRYRIPAPRVELQATFVSAVLESRYGNGDRDAANARDAGQKTPKVQRSRSGIVSLDPYAGEEGEVEEELRRV-GFDSYNSALRWARQLTFDDVLDELGSRGLQHDPKAGFGSLTRTLAEEVLAEDKLLDDV---DTKVAQESELEQAVTMSAQEIIRSLREGGEQVDATSSQEELAEKFVAMNLRQRGAS--RAGSDWS-------------------------RRQDQTDPYGEGENSNSQPRREDRWRGGKGNGNRRNDRESSSLSAEISDWSRLGDEGRDSAGGGTLLELEEAVRSVGGAVWRTARETGSLFGDTAAGLFPEVFPEGEAVGAPTTAGVSGDRGRYREGGAAARARSVRGRAGGARRAAASFAQSSANRAGLAVTRSAANGFLRGAEAAADWAGGGALAREYVLLIVAGFSGRIALQRLVTEGRAGKRSRR---------------VTATAGASSGPGRAGGSFSPAASGRRGTMYEREDRRRPRQSQASRKQRSKPKTWADSSRVEGSKTKMGESGRRRPLWDESEDDSDRGCVVM 885
            PL G A+      DG    G +   A S  S+  GG G     +    DV  ET+RL+S PTIDIKLELQMRGVEHRD FEK +LARRLAE+R SS  +  +P+P                  RD+ G    +DG  E+  R  ++      E    +A     +G  A  +G  +  +ARDV+R  R+GK AL RELN MGI HSRLS L+ LA QYA  R++AR   R FP                                           G G     RA+ GL      EE            G     LG       G     E+ R E   S   NA    T    G     R R+  L ARAD MSSRELM  LD LG RYRIPAPR ELQ  FVSAVL +      +  A A  AG +          IV++ PY     E +  LR   GF +Y+SALRWARQL FDDVLDEL  RG++  P+A +  LTR LA+EVLA+++L+      +   A  +ELE A++MSAQE+IR LR GGE  D T S+E LAE+   M LR RG     +GS  S                           +   DP G                                                                                                             +  R R+       R+ R RAGG RRAA  +AQSS NRAG AV +S ANG LRGAEAAADWAG GALARE+         GRIA Q+LV EG   +R++R                      ++G  R    ++ A +GRR                     + K K    + R +           R+PLW+ES+DD DRGCVVM
Sbjct:   81 PLSGTADDDTLGRDGVGKAGDKPPAASSGSSHETGGVGTATGEAAVGTDVATETRRLMSEPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSSCGNNPSPSPDXXXXXXXXXXXXXXXAGRDFGG--AAADGPRENAHRSNKASTMMGNEPQAAAATAVATEGRGAAPDGGSNRAYARDVARGTRMGKAALARELNGMGIAHSRLSDLSVLARQYAARRQEAREDARRFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWGDARGQRAASGLPWRFGKEEXXXXXXXEAAGVGDADFPLGGGGRDDVG-----EDGRSETGWSTRANAGSAATADGXGGGDKERSRKAVLHARADRMSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAAAGTRG-------KNIVAVSPYDTPIEEGDGGLRGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEQSPRADYSYLTRLLADEVLADEELMGGEGGPEGADAYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSASXXXXXXXXXXXXXXXXXXXXXXXXXEARGPADPLGR-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQETERSRQ------VRAARQRAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREF---------GRIAAQKLVLEGWKMERAKRRXXXXXXXXXXXXXXXAVDGDGATGSRRDTSGYAAAPAGRRXXXXXXXXXXXXXXXXXKGASKKKGKERGSARRTK--------KPARKPLWEESDDD-DRGCVVM 948          
BLAST of mRNA_H-elongata_contig54922.12889.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.740e-5
Identity = 28/41 (68.29%), Postives = 37/41 (90.24%), Query Frame = 0
Query:   80 LISLPTIDIKLELQMRGVEHRDLFEKVELARRLAESRASSS 120
            ++++PTIDIKLELQMRG++HRD  EK ELARRLA++RAS +
Sbjct:   82 IMTMPTIDIKLELQMRGIDHRDALEKQELARRLAQARASQA 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54922.12889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDP5_9PHAE3.560e-7936.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH23_ECTSI2.540e-7233.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CCS4_9STRA1.740e-568.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54922contigH-elongata_contig54922:4..3359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54922.12889.1mRNA_H-elongata_contig54922.12889.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54922 4..3359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54922.12889.1 ID=prot_H-elongata_contig54922.12889.1|Name=mRNA_H-elongata_contig54922.12889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=886bp
LPEAPPSNHTTRTLGTSRSRTIAVSHPLFGAAETAADGHAADGSRTSVAP
SYISNSGGGNGDDFHTSLDPDDVEAETQRLISLPTIDIKLELQMRGVEHR
DLFEKVELARRLAESRASSSCSQSNPAPPVRILGRARDYVGGETTSDGSG
ESKGRLPRSEVAEISAPPSFPDGEARKEGELDELHARDVSRAIRLGKQAL
TRELNVMGIMHSRLSSLTFLAGQYANGRRDARAALRSFPEPSGTDEADKK
VRRKQGRDPVLDRWTKGAEWGGKGATDSARASRGLRKGDSIEEEGGTEVT
IQPSDGRGGGYLGRKSARAAGMRTGQENDRFEMDRSADGNADVEITVRRD
GAASLRRRETSLQARADSMSSRELMSTLDALGVRYRIPAPRVELQATFVS
AVLESRYGNGDRDAANARDAGQKTPKVQRSRSGIVSLDPYAGEEGEVEEE
LRRVGFDSYNSALRWARQLTFDDVLDELGSRGLQHDPKAGFGSLTRTLAE
EVLAEDKLLDDVDTKVAQESELEQAVTMSAQEIIRSLREGGEQVDATSSQ
EELAEKFVAMNLRQRGASRAGSDWSRRQDQTDPYGEGENSNSQPRREDRW
RGGKGNGNRRNDRESSSLSAEISDWSRLGDEGRDSAGGGTLLELEEAVRS
VGGAVWRTARETGSLFGDTAAGLFPEVFPEGEAVGAPTTAGVSGDRGRYR
EGGAAARARSVRGRAGGARRAAASFAQSSANRAGLAVTRSAANGFLRGAE
AAADWAGGGALAREYVLLIVAGFSGRIALQRLVTEGRAGKRSRRVTATAG
ASSGPGRAGGSFSPAASGRRGTMYEREDRRRPRQSQASRKQRSKPKTWAD
SSRVEGSKTKMGESGRRRPLWDESEDDSDRGCVVM*
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