prot_H-elongata_contig54819.12879.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54819.12879.1
Unique Nameprot_H-elongata_contig54819.12879.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: G3G4F3_ASCNO (T-complex protein 1 delta subunit (Fragment) n=18 Tax=Fucaceae TaxID=3010 RepID=G3G4F3_ASCNO)

HSP 1 Score: 123 bits (309), Expect = 1.220e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    4 ISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            ISIVTELRSEHAKGRVGAGINVRKGTISDMYA+HVIQPVLVNSSALKLATECVGMILKIDDVVAV
Sbjct:    3 ISIVTELRSEHAKGRVGAGINVRKGTISDMYADHVIQPVLVNSSALKLATECVGMILKIDDVVAV 67          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: D7FKS7_ECTSI (T-complex protein 1 subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS7_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 8.540e-35
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAVM 69
            MNPISIVTELRSEHAKG+VGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAVM
Sbjct:  462 MNPISIVTELRSEHAKGKVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAVM 530          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A6S9KYX5_HETAK (T-complex protein 1 subunit delta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KYX5_HETAK)

HSP 1 Score: 101 bits (252), Expect = 1.390e-23
Identity = 50/68 (73.53%), Postives = 60/68 (88.24%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            MNPI++VTELRS H++G  GAGINVR+G +SDMY E V+QP+LV+SSAL LATECV MILKIDDVV+V
Sbjct:  464 MNPIALVTELRSRHSEGEGGAGINVRRGVVSDMYRERVVQPLLVSSSALGLATECVTMILKIDDVVSV 531          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A8K0I3Z2_COCNU (Putative T-complex protein 1 subunit delta n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0I3Z2_COCNU)

HSP 1 Score: 94.4 bits (233), Expect = 3.230e-23
Identity = 44/68 (64.71%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            +NPI+IVTELR+ HA+G + AGINVRKG I+D+  E+V+QP+LV++SA+ LATECV MILKIDD++ V
Sbjct:   69 LNPIAIVTELRNRHAQGEINAGINVRKGQITDILEENVVQPLLVSTSAITLATECVRMILKIDDIITV 136          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A699PHT6_TANCI (T-complex protein 1 subunit delta (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699PHT6_TANCI)

HSP 1 Score: 93.6 bits (231), Expect = 5.830e-23
Identity = 43/68 (63.24%), Postives = 60/68 (88.24%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            +NPI+IVTELR+ HA+G + AGINVRKG I++++ E+V+QP+LV++SA+ LATECV M+LKIDD+V V
Sbjct:   18 LNPITIVTELRNRHAQGEINAGINVRKGQITNIWEENVVQPLLVSTSAITLATECVRMVLKIDDIVTV 85          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: D5A9J5_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A9J5_PICSI)

HSP 1 Score: 91.3 bits (225), Expect = 9.070e-22
Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            +NPI+IVTELR+ HA G +  GINVRKG I+++  E+V+QP+LV++SA+ LATECV MILKIDD+V V
Sbjct:   90 LNPIAIVTELRNRHANGEINTGINVRKGQITNILEENVVQPLLVSTSAISLATECVRMILKIDDIVTV 157          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A0A9YB85_LYGHE (T-complex protein 1 subunit delta n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YB85_LYGHE)

HSP 1 Score: 90.9 bits (224), Expect = 9.210e-22
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVV 66
            + PISIVTELR+ HA   V AG+NVRKG ++DM  E+V+QP+LV++SA++LATECV MILKIDDV+
Sbjct:   76 LQPISIVTELRNAHASNNVNAGVNVRKGCVTDMVEENVVQPLLVSTSAVRLATECVMMILKIDDVI 141          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A835YW20_9STRA (T-complex protein 1 subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW20_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.580e-21
Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVA 67
            +NPI  VTELR++H  G  GAGINVR G I+DMY   V+QP+LV+SSA+KLATECVGMILKIDDVVA
Sbjct:  460 LNPIQKVTELRAKHGAGVSGAGINVRSGEITDMYESGVVQPMLVSSSAIKLATECVGMILKIDDVVA 526          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: UPI0009E4460C (T-complex protein 1 subunit delta-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4460C)

HSP 1 Score: 89.4 bits (220), Expect = 2.570e-21
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            +NPI IVTELR+ HAKG   AGINVRKG I+++  E+V+QP+LV++SA+ LA ECV MILKIDD+V V
Sbjct:   63 LNPIFIVTELRNRHAKGETNAGINVRKGQITNILEENVVQPLLVSTSAVTLAIECVRMILKIDDIVTV 130          
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Match: A0A7S0TCK7_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0TCK7_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 3.400e-21
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAV 68
            +NPI IVTELR+ H  G    GINVRKGTISDM  E+V+QP+LV SSAL LATECV M+LKIDD++ V
Sbjct:  144 LNPIEIVTELRNVHTAGNAYHGINVRKGTISDMKDENVLQPMLVTSSALSLATECVRMVLKIDDIIPV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54819.12879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G3G4F3_ASCNO1.220e-3598.46T-complex protein 1 delta subunit (Fragment) n=18 ... [more]
D7FKS7_ECTSI8.540e-3598.55T-complex protein 1 subunit delta n=2 Tax=Ectocarp... [more]
A0A6S9KYX5_HETAK1.390e-2373.53T-complex protein 1 subunit delta n=1 Tax=Heterosi... [more]
A0A8K0I3Z2_COCNU3.230e-2364.71Putative T-complex protein 1 subunit delta n=1 Tax... [more]
A0A699PHT6_TANCI5.830e-2363.24T-complex protein 1 subunit delta (Fragment) n=1 T... [more]
D5A9J5_PICSI9.070e-2263.24Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A0A9YB85_LYGHE9.210e-2265.15T-complex protein 1 subunit delta n=1 Tax=Lygus he... [more]
A0A835YW20_9STRA1.580e-2171.64T-complex protein 1 subunit delta n=1 Tax=Tribonem... [more]
UPI0009E4460C2.570e-2164.71T-complex protein 1 subunit delta-like n=1 Tax=Pha... [more]
A0A7S0TCK7_9CHLO3.400e-2167.65Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 1..68
e-value: 7.3E-21
score: 76.4
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 2..67
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 1..67
e-value: 1.0E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 1..67
NoneNo IPR availablePANTHERPTHR11353:SF26T-COMPLEX PROTEIN 1 SUBUNIT DELTAcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54819contigH-elongata_contig54819:607..1036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54819.12879.1mRNA_H-elongata_contig54819.12879.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54819 607..1036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54819.12879.1 ID=prot_H-elongata_contig54819.12879.1|Name=mRNA_H-elongata_contig54819.12879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
MNPISIVTELRSEHAKGRVGAGINVRKGTISDMYAEHVIQPVLVNSSALK
LATECVGMILKIDDVVAVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027413GROEL-like_equatorial_sf
IPR002423Cpn60/TCP-1