prot_H-elongata_contig54794.12878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54794.12878.1
Unique Nameprot_H-elongata_contig54794.12878.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length462
Homology
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: D8LAV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV2_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 3.840e-86
Identity = 235/482 (48.76%), Postives = 268/482 (55.60%), Query Frame = 0
Query:    7 PPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGALTSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPSSVVEASLEGIEQRVS-PFTPLSS-SALPSGIVGDTTPGGPPGAVSTSTARGTPQ-TEDTALLEATAVAGSSTPVAAAAGARQAGTNGDIGNYITKAESSKRGSPPPLNGWVLHDRGNTGVTVA---------PRRTVPIPAVEPFDAATAAVT-------------TLTTASLKTEAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEV-GNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 462
            P YLAAGVLPFCVLGGDLLFLLGQQLRF SR RG SF E+ G  T+    VAA +    AS    +L    PP     PL   PSG+       + V     G   +VS   +P SS SA                           Q + +TA     A   +S PVA   GA + GT   +    T A  ++ G   P+ G      G     VA              P  A +P  A  AAV              +  TA L  E     PP    D        +EE     G   Q  VPAGLLWSDFGG REA DADAEETASREFAEESFG+F+GVRL+SDSVARSQATM++ALRDPSLRGKRVFECRNGGYVMF+AEVDFVPD+M+ LARKEIV  GE G+G D      E  G+G   AS+P   GFSEKTDFAWVPA+ LL AMRESRNRSTR+VVV+LG CRYLRLFHK
Sbjct:  139 PAYLAAGVLPFCVLGGDLLFLLGQQLRFHSRVRGRSFPEMGGGSTT---PVAAEDEGRVASAAARQL----PPSIETTPL---PSGAPXXXXXXTPVWRPRRGPRAKVSLSLSPGSSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXQASRETAAKVEEAAPSASFPVA---GASRDGTEHGM---QTGARGARAGGGAPMGGGEFGMAGKRSEMVALAVQENDLEAATDSPCGAGDPSAAHGAAVKNGPRSGGINPEDGSSNTAVLPEE----DPPAATGDP----HPPVEETAAAPG---QGTVPAGLLWSDFGGAREASDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIV--GEDGSGPDAVGVQGECWGSGQGQASSP---GFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK 588          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A6H5JSG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 3.190e-77
Identity = 216/490 (44.08%), Postives = 251/490 (51.22%), Query Frame = 0
Query:    1 PVPAERPPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGALTSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPSSVVEASLEGIEQRVSPFTPLSSSALPSGIVGDTTPGGPPGAVSTSTARGTPQTEDTALLEATAVAGSSTP----------VAAAAGARQAGTNGDIG---------------NYITKAESSKRGS--PPPLNGWVLHDRGNTGVTVAPRRTVPIPAVEPFDAATAAVTTLTTASLKTEAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKN-DSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 462
            P P   P YLAAGVLPFCVLGGDLLFLLGQQLRFRSR RG SF  + G  T+S                +  LS    P T+                                                           VS  TA    + E+ A      +AG+ST             A AG       GD G               N +  A  S  G+  P  L+G  + +   +G +             P D ++       TA L  E     PP   A S  +    +EE     G   Q  VP GLLWSDFGG +EA DADAEETASREFAEESFG+F+GVRL+SDSVARSQATM++ALRDPSLRGKRVFECRNGGYVMF+AEVDFVPD+M+ LARKEIV  GE  +G D      +  G+G   AS+P   GFSEKTDFAWVPA+ LL AMRESRNRSTR+VVV+LG CRYLRLFHK
Sbjct:  134 PSPPAPPAYLAAGVLPFCVLGGDLLFLLGQQLRFRSRVRGRSFPAMGGGSTTS-AXXXXXXXXXXXXXXQLPLSMETTPLTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQVSRETAA---KVEEAAPASPFQLAGASTDGTEHVMQTGVCRARAGGGAPTGGGDFGIAGKRSEMAAVAVQENDLEAATDSPSGAGDPSALHGTAVKNGPRSGGS------------NPEDGSS------NTALLPEE----DPP---AASIGDPHPPVEETAAAPG---QGTVPVGLLWSDFGGAKEAGDADAEETASREFAEESFGIFHGVRLESDSVARSQATMSSALRDPSLRGKRVFECRNGGYVMFVAEVDFVPDLMINLARKEIV--GEDDSGSDAVGVQGEHGGSGQGQASSP---GFSEKTDFAWVPASVLLRAMRESRNRSTRKVVVKLGGCRYLRLFHK 586          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S3XND0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XND0_HETAK)

HSP 1 Score: 102 bits (253), Expect = 8.280e-20
Identity = 89/272 (32.72%), Postives = 111/272 (40.81%), Query Frame = 0
Query:  285 DIVPAGLLWSDFGGGREADDADA-EETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIV-------------DGGEGGTGKDGKND--------SDEVGN--------------------------------GTDSASTPASE----------------------------------------GFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVRLGDCRYLRLFHK 462
            D    GLLWSDFGG +E  D +  E TASREFAEE+FG+F G+      V +S   M   L D    GK VF+  NG YVMF+A V FV D+M+ LAR++               +G  G   +D K +        SD  GN                                GT      A+                                         G SEK DFAWVPA SL+  + E+ NRS R+V +RLG CR  R+FHK
Sbjct:   47 DTQMHGLLWSDFGGKKEPQDQEIPERTASREFAEETFGMFGGLGGSEKIVQKSAEEMLNTLLDKEKEGKEVFKIINGQYVMFLAPVTFVDDLMLNLAREQWQQEHGNAMQSHPHKEGSLGTQSEDSKRECADRKAARSDSSGNEPKQEDYYEPVCTSGKVPHQPAETSSVNKILSGTQPDLAKAAHDSSGVNQLLKCLADVVPQMSESKIPSLTHQEELLLQQQKGGDSEKLDFAWVPAQSLVKTLEENANRSRRKVSLRLGGCRVFRMFHK 318          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A8J9S0U8_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0U8_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 6.670e-14
Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 0
Query:  292 LWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTA 435
            +W DFGG REA D+D ++TASREFAEE+ G+F    + S SVA SQ  MA  LRD     + V + + G Y MFIA + F+  +M  LA ++                         +A T A  G +EKT FAWV    LL A
Sbjct:   56 MWKDFGGSREAIDSDVQDTASREFAEETLGMFASQNVDSASVAASQVLMAAQLRDQRHSLEVVHKLKKGQYSMFIALLPFLDPLMFYLAMRQ-------------------------NAETQAVTG-AEKTAFAWVRLDQLLAA 173          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S3VJL3_DUNTE (Hypothetical protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VJL3_DUNTE)

HSP 1 Score: 75.9 bits (185), Expect = 7.780e-11
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  291 LLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKE 383
            ++WSDFGG REA DAD+ ETASREFAEE+ G+F GV +   +V RS   MA  LR        V + R G Y M+   V ++  I  +LA ++
Sbjct:   52 IMWSDFGGKREAADADSIETASREFAEETLGVFGGVSVDPAAVKRSADEMAARLRSGDRSLCSVHQLRKGAYHMYACMVTYIDPIFFELAMQQ 144          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A5J4XWS7_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XWS7_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-10
Identity = 52/141 (36.88%), Postives = 69/141 (48.94%), Query Frame = 0
Query:  295 DFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTA 435
            DFGG REA D D+E TASREFAEE+ GLF G  +   SVA     M T L       K V + + G Y M++A+   +  +M+ LA ++                         +A T A +G +EKT FAWV  + LL A
Sbjct:   19 DFGGQREAIDPDSETTASREFAEETMGLFGGCEVNGSSVAACSRQMRTQLIQRQHVLKVVHQLKKGEYHMYVAQTPHIDPLMLHLALQQ-------------------------NAETDAVDG-AEKTAFAWVALSDLLAA 133          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A061QTB2_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QTB2_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 5.400e-8
Identity = 52/152 (34.21%), Postives = 71/152 (46.71%), Query Frame = 0
Query:  292 LWSDFGGGREA-DDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRGKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNR 442
            +W DFGG REA DD D+  TASREF+EE+ G+F+   +   SVA S   M+  LR       R  + + G Y  F+A   +V  + + LA +                          +  T   EG +EKT FAWVP   LL A+ E+  R
Sbjct:   62 MWGDFGGHREASDDGDSVYTASREFSEETLGMFSSALVDPSSVADSTREMSLILRSRDAMQVR-HKLKKGEYHFFVARTAYVEPLYLHLAAQL-------------------------NRETGMVEG-AEKTAFAWVPLGELLLAVSEAGRR 186          
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Match: A0A7S0E5L3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E5L3_9CRYP)

HSP 1 Score: 62.4 bits (150), Expect = 7.610e-7
Identity = 59/187 (31.55%), Postives = 81/187 (43.32%), Query Frame = 0
Query:  275 KGITAGFCKQDIVPAGLLWSDFGGGREADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLRG------------------KRVFECRNGGYVMFIAEVDFVPDIMMKLARKE---IVDGGEGGTGKDGKNDSDEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESR 440
            K +  GF     V     WSDFGG RE D  DAEETA REF+EE+ GL+ G+      V  S A +   L D S R                   KRVF  +NG Y+ F   + ++  ++ +LAR E   +V G E         DSD                 +EK D+AW+ A  +L  + + +
Sbjct:   62 KELAKGFTIAGKVK--YCWSDFGGKRE-DFEDAEETALREFSEETLGLWGGMGGLEQRVQASVANVRRILNDCSARCAGREEEREAERRAPGNQLKRVFVMKNGSYLTFFLPLPYIDPLLFQLARDENDKLVPGAE--------RDSDTC-------------RCAEKRDWAWLDAEEVLRGVEKGK 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54794.12878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LAV2_ECTSI3.840e-8648.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSG8_9PHAE3.190e-7744.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XND0_HETAK8.280e-2032.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J9S0U8_9CHLO6.670e-1439.58Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A7S3VJL3_DUNTE7.780e-1145.16Hypothetical protein n=2 Tax=Dunaliella tertiolect... [more]
A0A5J4XWS7_9CHLO1.050e-1036.88Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A061QTB2_9CHLO5.400e-834.21Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A0A7S0E5L3_9CRYP7.610e-731.55Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..462
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54794contigH-elongata_contig54794:721..3338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54794.12878.1mRNA_H-elongata_contig54794.12878.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54794 721..3338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54794.12878.1 ID=prot_H-elongata_contig54794.12878.1|Name=mRNA_H-elongata_contig54794.12878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=462bp
PVPAERPPYLAAGVLPFCVLGGDLLFLLGQQLRFRSRGRGSSFSEIEGAL
TSSDGVVAATNTTDTASCPRTKLSPPAPPWTADGPLIDDPSGSSCRLPPS
SVVEASLEGIEQRVSPFTPLSSSALPSGIVGDTTPGGPPGAVSTSTARGT
PQTEDTALLEATAVAGSSTPVAAAAGARQAGTNGDIGNYITKAESSKRGS
PPPLNGWVLHDRGNTGVTVAPRRTVPIPAVEPFDAATAAVTTLTTASLKT
EAYRQTPPVTRADSTVNEREKLEEKGITAGFCKQDIVPAGLLWSDFGGGR
EADDADAEETASREFAEESFGLFNGVRLQSDSVARSQATMATALRDPSLR
GKRVFECRNGGYVMFIAEVDFVPDIMMKLARKEIVDGGEGGTGKDGKNDS
DEVGNGTDSASTPASEGFSEKTDFAWVPAASLLTAMRESRNRSTRRVVVR
LGDCRYLRLFHK
back to top