prot_H-elongata_contig54722.12865.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54722.12865.1
Unique Nameprot_H-elongata_contig54722.12865.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: D8LDP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDP4_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.650e-50
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 0
Query:    1 MLDTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            MLDTYWEGKAPPS+VLGPALA APS GLG++SL AFAAGTYCIHETNILHTV+PD IQPLYVAG++LVPISWGLHVASWIQKQNGK
Sbjct:   47 MLDTYWEGKAPPSEVLGPALAKAPSAGLGVVSLAAFAAGTYCIHETNILHTVSPDNIQPLYVAGALLVPISWGLHVASWIQKQNGK 132          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A836C871_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C871_9STRA)

HSP 1 Score: 126 bits (317), Expect = 8.140e-36
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    3 DTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            DTYWEGKAPPS+VLGP ++  PS  LG+ISL+    GTY +HE+NI HT+T DTI P Y+ GS+L P++WG HVASWIQKQNGK
Sbjct:   43 DTYWEGKAPPSKVLGPVVSQIPSPALGVISLICLGVGTYSVHESNIFHTLTADTINPGYIIGSLLTPVAWGTHVASWIQKQNGK 126          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A7S1U023_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U023_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.520e-34
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    4 TYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNG 85
            TYWEGK PPS VLGP L+  PSG LG +S+++  AGTY +HE+NILHT+  DT+ P++V GS+LVPISWGLHVA+WI K+NG
Sbjct:   43 TYWEGKVPPSTVLGPVLSKTPSGLLGPVSIISLLAGTYSVHESNILHTLNADTVYPVFVIGSLLVPISWGLHVAAWINKENG 124          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A4D9DAY0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAY0_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.010e-32
Identity = 56/83 (67.47%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    4 TYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            TYWEGKAP S VLGP LA  PSG LG  SLVA   G YC+HE+NI + +T D+I P YV GS L PISWG+HVA+WIQKQNGK
Sbjct:   48 TYWEGKAPSSAVLGPFLAKVPSGVLGPASLVALMVGAYCVHESNIFNILTVDSINPAYVLGSFLTPISWGMHVAAWIQKQNGK 130          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A7S2S169_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S169_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.670e-26
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    3 DTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            DTYWEGKAPPS VLGP L+   SG LG+ SL   A G+YC  + N+     PD + PL+V G+ L+PISWGLHVASWIQK+NGK
Sbjct:   68 DTYWEGKAPPSTVLGPVLSKTNSGLLGLTSLAFLAVGSYCAVQNNLFSL--PD-VNPLFVLGANLLPISWGLHVASWIQKENGK 148          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: M2Y646_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y646_GALSU)

HSP 1 Score: 95.9 bits (237), Expect = 1.420e-23
Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    3 DTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            DT+W GK PPS VLG      PS    I S+V    G+YC++E+N+L  +T  TI PLYV GS+LVP SWGLHVA WIQ +NGK
Sbjct:   51 DTFWTGKVPPSTVLGIGEK-VPSAAYIISSVVCLLVGSYCVYESNLLSPLTVTTINPLYVLGSLLVPYSWGLHVAGWIQLKNGK 133          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A1X6NZL8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZL8_PORUM)

HSP 1 Score: 95.9 bits (237), Expect = 1.460e-23
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    2 LDTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            +DTYWEGKAPPS VLG      PSG   + S+++ A G+Y ++++N+   +TP T++  Y+  S+L PISWGLHVASWIQKQN K
Sbjct:   51 MDTYWEGKAPPSTVLGLGK-NVPSGLYLLASVLSLALGSYGVYKSNLASPLTPSTVEAQYILASLLAPISWGLHVASWIQKQNNK 134          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A7S2DS21_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DS21_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.640e-23
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0
Query:    1 MLDTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            M DTYWEG  PPS VLGP L+ + SG LGI SL+AF+ G + +  + I  T     I PL+ A +VL+PISWGLHVASWIQK+NGK
Sbjct:   58 MEDTYWEGNFPPSNVLGPLLSKSSSGVLGIGSLLAFSGGAFGL-SSQIALTSQQLQISPLFCAMTVLIPISWGLHVASWIQKENGK 142          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A7S1XBA2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBA2_9RHOD)

HSP 1 Score: 89.0 bits (219), Expect = 5.650e-21
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    2 LDTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            +DT W+GK PPS VLG      PS      S VA   G YC  ++N++  +TP+T++P ++ GS+LVPISWGLHVA WIQ+QN K
Sbjct:   39 VDTTWDGKFPPSTVLGFGK-DVPSPFYIFSSFVALVVGGYCCTQSNLISPLTPETVRPDFILGSLLVPISWGLHVAGWIQRQNNK 122          
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Match: A0A7S3SKP9_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3SKP9_9SPIT)

HSP 1 Score: 89.4 bits (220), Expect = 7.700e-21
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0
Query:    3 DTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILHTVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK 86
            DT+W  K  PS V+       PS   G+ S +AF+ G YCI ++NI++ ++  T+   YVAG++LVP SWGLHVA+WIQKQNGK
Sbjct:   63 DTWWGDKDYPSSVVLGIGKDVPSSIYGVTSAIAFSVGAYCIAQSNIINILSGSTVNGFYVAGALLVPYSWGLHVAAWIQKQNGK 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54722.12865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LDP4_ECTSI1.650e-5088.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C871_9STRA8.140e-3665.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1U023_9STRA7.520e-3464.63Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DAY0_9STRA1.010e-3267.47Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2S169_9STRA5.670e-2660.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M2Y646_GALSU1.420e-2355.95Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1X6NZL8_PORUM1.460e-2352.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2DS21_9STRA3.640e-2358.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XBA2_9RHOD5.650e-2150.59Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3SKP9_9SPIT7.700e-2150.00Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54722contigH-elongata_contig54722:1773..2033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54722.12865.1mRNA_H-elongata_contig54722.12865.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54722 1737..2950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54722.12865.1 ID=prot_H-elongata_contig54722.12865.1|Name=mRNA_H-elongata_contig54722.12865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MLDTYWEGKAPPSQVLGPALAGAPSGGLGIISLVAFAAGTYCIHETNILH
TVTPDTIQPLYVAGSVLVPISWGLHVASWIQKQNGK*
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