prot_H-elongata_contig54637.12851.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig54637.12851.1
Unique Name	prot_H-elongata_contig54637.12851.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	93

Homology

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: D7G9B2_ECTSI (Magnesium and cobalt transport protein CorA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B2_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.030e-48
Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0

Query:    1 MLEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            MLEEQA R++TWSRSLN DWVNEQQHRMNQV+YILTMVTSAFMPAQFL GVFGMNFKFMPEL WRYSYASFWVLVALLA +SYTVYKR KWL
Sbjct:  599 MLEEQALRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLTGVFGMNFKFMPELNWRYSYASFWVLVALLAFSSYTVYKRHKWL 690

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A6H5L3P2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P2_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.820e-47
Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0

Query:    1 MLEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            MLEEQA R++TWSRSLN DWVNEQQHRMNQV+YILTMVTSAFMPAQFL GVFGMNFKFMPEL WRYSYASFWVLVALLA +SYTVYKR KWL
Sbjct:  801 MLEEQALRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLTGVFGMNFKFMPELNWRYSYASFWVLVALLAFSSYTVYKRHKWL 892

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A835YKG6_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG6_9STRA)

HSP 1 Score: 129 bits (324), Expect = 7.620e-33
Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 MLEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            +LEEQA R+T WSRSLN D++NEQ HRMN V+Y+LTMVT+AF+P QFL GVFGMNFK+MPEL W+YSY  FW L+  LA   +  Y++ +WL
Sbjct:  654 VLEEQAYRMTAWSRSLNDDFMNEQTHRMNNVMYLLTMVTTAFLPGQFLTGVFGMNFKYMPELDWKYSYLIFWALIFALATFVFNFYRKNRWL 745

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A0D2VNK3_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VNK3_CAPO3)

HSP 1 Score: 110 bits (276), Expect = 2.460e-26
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 0

Query:    2 LEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            L+EQ + +  W++SLN D +NEQQ RMNQV+Y+LTMVT+ F+P QF+ GV+GMNF+ +PEL WRYSY  FW++V +L   +   +KR+ WL
Sbjct:  778 LQEQTNSMMQWAKSLNDDLLNEQQFRMNQVMYMLTMVTTTFVPLQFITGVYGMNFETLPELTWRYSYLVFWIIVLMLLTIALWFFKRRGWL 868

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A835Z9I1_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.320e-26
Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 0

Query:    1 MLEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVL 74
            +LEEQA R+ +WS SLN D++NEQ H+MN+V+ +LTMVT+A +P QFLAGVFGMNF++MPEL W YSYA FWVL
Sbjct:  585 VLEEQAMRMASWSASLNEDYLNEQGHKMNKVMTVLTMVTTACLPGQFLAGVFGMNFRYMPELNWHYSYALFWVL 658

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: I2CPD3_NANGC (Magnesium and cobalt transport protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPD3_NANGC)

HSP 1 Score: 92.4 bits (228), Expect = 3.570e-20
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 0

Query:    2 LEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            L+EQ   +  W++SLN +++NEQQ+RMNQVIY+LTMVT+  +PAQFL GVFGMNF++ P L   + +  FWV+ +        +++ ++WL
Sbjct:  293 LKEQTHSMIGWAKSLNDEYLNEQQYRMNQVIYLLTMVTTLMLPAQFLTGVFGMNFEYFPLLNEPWGFPVFWVMTSSAIGLILYIFRAKRWL 383

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A4D9CQ61_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ61_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.460e-20
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = 0

Query:    2 LEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            L+EQ   +  W++SLN +++NEQQ+RMNQVIY+LTMVT+  +PAQFL GVFGMNF++ P L   + +  FWV+ +        +++ ++WL
Sbjct:  700 LKEQTHSMIGWAKSLNDEYLNEQQYRMNQVIYLLTMVTTLMLPAQFLTGVFGMNFEYFPLLNEPWGFPVFWVMTSSAIGLILYIFRAKRWL 790

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A1I2B1D9_9BACT (Magnesium transport protein CorA n=1 Tax=Thermophagus xiamenensis TaxID=385682 RepID=A0A1I2B1D9_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 3.700e-18
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 0

Query:   13 SRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            S  L   + + Q HRMN+V+ +LT+VTS F+P  FLAGV+GMNFKFMPEL W Y Y +   L+ALLA+     +K++KWL
Sbjct:  273 SEGLTNLFFSYQGHRMNEVMKVLTIVTSLFIPLSFLAGVYGMNFKFMPELDWNYGYPAVLALMALLALGMLLFFKQKKWL 352

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A1V4WHP4_9DELT (Magnesium transport protein CorA n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1V4WHP4_9DELT)

HSP 1 Score: 85.9 bits (211), Expect = 6.380e-18
Identity = 36/78 (46.15%), Postives = 58/78 (74.36%), Query Frame = 0

Query:   15 SLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            SL   +++   +RMN+++ +LT++ + FMP  FLAGV+GMNFK+ PEL+WR++Y SFW+ V ++AV     ++R+KWL
Sbjct:  263 SLLDIYLSSTSNRMNEIMKVLTVIATIFMPMTFLAGVYGMNFKYFPELEWRWAYISFWIAVIIIAVLMIFYFRRKKWL 340

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BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Match: A0A841TDM3_9BACL (Magnesium transport protein CorA n=1 Tax=Cohnella lubricantis TaxID=2163172 RepID=A0A841TDM3_9BACL)

HSP 1 Score: 85.1 bits (209), Expect = 8.890e-18
Identity = 35/72 (48.61%), Postives = 56/72 (77.78%), Query Frame = 0

Query:   21 VNEQQHRMNQVIYILTMVTSAFMPAQFLAGVFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL 92
            +N +  RMN+++  LT+++S F+P  FLAGV+GMNF+FMPEL+W++ Y + W+++AL+A   +  YKR+KWL
Sbjct:  238 LNMKSDRMNEIMKTLTIISSIFLPLTFLAGVYGMNFRFMPELEWKFGYPALWLIMALVAAGLWWFYKRKKWL 309

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54637.12851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G9B2_ECTSI	6.030e-48	89.13	Magnesium and cobalt transport protein CorA n=1 Ta...	[more]
A0A6H5L3P2_9PHAE	1.820e-47	89.13	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A835YKG6_9STRA	7.620e-33	63.04	Cora-like Mg2+ transporter protein-domain-containi...	[more]
A0A0D2VNK3_CAPO3	2.460e-26	53.85	Uncharacterized protein n=1 Tax=Capsaspora owczarz...	[more]
A0A835Z9I1_9STRA	6.320e-26	67.57	Cora-like Mg2+ transporter protein-domain-containi...	[more]
I2CPD3_NANGC	3.570e-20	46.15	Magnesium and cobalt transport protein (Fragment) ...	[more]
A0A4D9CQ61_9STRA	7.460e-20	46.15	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A1I2B1D9_9BACT	3.700e-18	52.50	Magnesium transport protein CorA n=1 Tax=Thermopha...	[more]
A0A1V4WHP4_9DELT	6.380e-18	46.15	Magnesium transport protein CorA n=3 Tax=Deltaprot...	[more]
A0A841TDM3_9BACL	8.890e-18	48.61	Magnesium transport protein CorA n=1 Tax=Cohnella ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.340		coord: 19..92 e-value: 2.4E-25 score: 90.4
None	No IPR available	PANTHER	PTHR46494	FAMILY NOT NAMED	coord: 21..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 87..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 55..65
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..30
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 31..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..86
None	No IPR available	SUPERFAMILY	144083	Magnesium transport protein CorA, transmembrane region	coord: 27..89
None	No IPR available	TMHMM	TMhelix		coord: 31..53
None	No IPR available	TMHMM	TMhelix		coord: 68..86
IPR002523	Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB	PFAM	PF01544	CorA	coord: 4..85 e-value: 8.4E-22 score: 77.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54637	contig	H-elongata_contig54637:1646..3560 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54637.12851.1	mRNA_H-elongata_contig54637.12851.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig54637 1646..3575 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig54637.12851.1 ID=prot_H-elongata_contig54637.12851.1|Name=mRNA_H-elongata_contig54637.12851.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MLEEQASRITTWSRSLNTDWVNEQQHRMNQVIYILTMVTSAFMPAQFLAG
VFGMNFKFMPELKWRYSYASFWVLVALLAVTSYTVYKRQKWL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002523	MgTranspt_CorA/ZnTranspt_ZntB