prot_H-elongata_contig54606.12848.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54606.12848.1
Unique Nameprot_H-elongata_contig54606.12848.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length556
Homology
BLAST of mRNA_H-elongata_contig54606.12848.1 vs. uniprot
Match: A0A6H5L4T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T9_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 1.880e-92
Identity = 230/588 (39.12%), Postives = 308/588 (52.38%), Query Frame = 0
Query:    3 DEDENIAKTRPRVLPDPREREWIQAPISPWLPSSTAPAFPDMVSAPEGLEEVEPRPATIGVGDGRSQEETDGKAEVDLRAMGMRVNTKDAVTTDWAWEHGRPDANADDEGWTNLETWREDLGGDSDTSEFFVPPEGGPTAR---PERPSGKGFQEVGGVLRRPTMLEILEG-KLPLGEENGDKQEDGLVDTDEATGELVLPENMEEIMAEMRALAQQELDRRKQRHPHLRDXXXXXXXXVEEQPRGEAGWLEEEGNDELLDEDEGEEGDEFGSEMEMNLAGVDAESRDR----------------------AKLERLLAKLSGSFGGEDGV------DDPENDDPERRVEANAVFDPS-------AGTSPDELAPPRYEEAPREDDEEECEGWTPLMHEGLRDRTVALLGVVRLLEADAMEAARREDEKMGFPRGSGGTAGPAVQATMRARLRCLTESRRCKKAIEFIEQEYPREGAKLDNKAALQIVEMYINTRGVGLAEAFEGKCRTEYGLTPDRRILGAILNARARRAYAWDHEVPHVERVLDALQQHRIKPHENELRFVRKIVDKGKLNHSWLPADPEANVKRV 551
            DE +  AKTRPRVLPD R+RE I+AP+  WL    +   P       GL E               Q                                                     + G    S  +  PEG   +      + SG+  +E G V ++ +ML++L+G +   G   G+ +E G   +++  G LVLP+N+E +M E+RALAQQ+LDRR+ RHPHLR    XXXXX                    L+E+E           E+ +  VDA S +                       A  E +LA+      G D        DD +++D    ++   + D          G+  D+L   + ++   E+ EEE E WTPLMH+GL++RT AL+GVV+LLE D M AAR  D + GF  G  G AGPAV+  +R+RL+ LTESRRCK+AI+F+++EYP+EGAK+D +AALQ+VEMY+NTRGVGLAEAF  +   E G+ P+RRIL AILNARARRA AW HE+PHV RVLD +QQ RIKPHENELRFVR++VD+GK  HSWLP DP  N+KR+
Sbjct:  690 DEGDKEAKTRPRVLPDLRDRERIEAPVPHWLSGEASDPLP-------GLAE--------------QQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGGKSRSREYQSPEGTGDSSGRVSSKLSGRSGKEEG-VFKKASMLDLLQGDQADGGFSGGEPKETGW--SEDEDGRLVLPDNLEGMMEEVRALAQQDLDRRRNRHPHLRGKADXXXXXXXXXXXXXXXXXXXXXXQWGLEEEE-----------ELGIENVDARSEEEQGXXXXXXXVSAKRAEPELEANAAFEEMLAESRTQRLGADQEQIQHFGDDDDDEDAYSFLDGEEIADVEDIDNVHDGGSVMDQLNGLQTQQQDDEEAEEEYEDWTPLMHQGLKERTEALMGVVQLLETDGMVAARAADAEKGFRVGGEGGAGPAVRRMLRSRLKTLTESRRCKEAIKFVDEEYPKEGAKVDAEAALQVVEMYVNTRGVGLAEAFVQRWTEENGVKPNRRILAAILNARARRAVAWRHEIPHVRRVLDTMQQLRIKPHENELRFVRQLVDRGKFEHSWLPVDPNTNLKRM 1242          
BLAST of mRNA_H-elongata_contig54606.12848.1 vs. uniprot
Match: D8LDL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL3_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.170e-57
Identity = 194/509 (38.11%), Postives = 263/509 (51.67%), Query Frame = 0
Query:    3 DEDENIAKTRPRVLPDPREREWIQAPISPWLPSSTAPAFPDMVSAPEGLEEVEPRPATIGVGDGRSQEETDGKAEVDLRAMGMRVNTKDAVTTDWAWEHGRPDANADDEGWTNLETWREDLGGDSDTSEFFVPPEGGPTARPERPSGKGFQEVGGVLRRPTMLEILEG-KLPLGEENGDKQEDGLVDTDEATGELVLPENMEEIMAEMRALAQQELDRRKQRHPHLRDXXXXXXXXVEEQPRGEAG------W-LEEEGNDELLDEDEGEEGDE---------------FGSEMEMNLAGVD--AESRDR---AKLERLLAKLSGSFGGEDGVDDPEND-DPERRVEANAVFDPSAGTSP-DELAPPRYEEAPREDDEEECEGWTPLMHEGLRDRTVALLGVVRLLEADAMEAARREDEKMGFPRGSGGTAGPAVQATMRARLRCLTESRRCKKAIEFIEQEYPREGAKLDNKAALQIVEMYINTRGVGLAEAFEGKCRTEYGLTPDRR 481
            DE +  AKTRPRVLPDPR+RE I+AP+  WL                          ++  G G  +EE D   +V  R    R             EH  P+   D  G  +                              R SG+  +E G V ++ +ML++LEG +   G   G+ +E G   +++  G LVLP+N+E +M E+RALAQQ+LDRRK RHPHLR    XXXXX                W LEEE  + L  ED G   +E                  E+E N A  +  AESR +   A  E+    +   FG +DG +D  +  D E   +   +     G+S  D+L   + ++   E+ EEE E WTPLMH+GL++RT AL+GVV+LLEAD M AAR  D + GF  G  G AGPAV+  +R+RL+ LTESRRCK+AI+F+++EYP+EGAK+D +  LQ+VEMY+NTRGVGLAEAF  +   E G+ P+RR
Sbjct:  650 DEGDKEAKTRPRVLPDPRDRERIEAPVPHWLSDG----------------------GSVREGWGGWEEEED---DVSGRESRRR-------------EHQSPEGTGDPAGRVS-----------------------------SRLSGRSGEEEG-VFKKASMLDLLEGDQADGGVSGGEAKETGW--SEDEDGRLVLPDNLEGMMEEVRALAQQDLDRRKNRHPHLRGKGDXXXXXXXXXXXXXXXXXXXDQWGLEEE--EALGIEDVGATREEEXXXXXXXXXXXXXXXXPEVEANAAFEEMLAESRTQTLGADQEQXXXXIQ-RFGDDDGDEDTSSFLDGEEIADVEDIDSVHDGSSLIDQLDRLQTQQQDDEEAEEEYEDWTPLMHQGLKERTEALMGVVQLLEADGMAAARAADAEKGFRVGGEGGAGPAVRRMLRSRLKTLTESRRCKEAIKFVDEEYPKEGAKVDAEGVLQVVEMYVNTRGVGLAEAFVQRWTEENGVKPNRR 1085          
BLAST of mRNA_H-elongata_contig54606.12848.1 vs. uniprot
Match: D8LDL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL4_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 4.380e-12
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
Query:  511 LQQHRIKPHENELRFVRKIVDKGKLNHSWLPADPEANVKRV 551
            +QQ RIKPHENELRFVR++VD+GK  HSWLP DP AN+KR+
Sbjct:    1 MQQLRIKPHENELRFVRQLVDRGKFEHSWLPVDPNANLKRM 41          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54606.12848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4T9_9PHAE1.880e-9239.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDL3_ECTSI1.170e-5738.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL4_ECTSI4.380e-1273.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54606contigH-elongata_contig54606:99..3263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54606.12848.1mRNA_H-elongata_contig54606.12848.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54606 99..3263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54606.12848.1 ID=prot_H-elongata_contig54606.12848.1|Name=mRNA_H-elongata_contig54606.12848.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=556bp
ESDEDENIAKTRPRVLPDPREREWIQAPISPWLPSSTAPAFPDMVSAPEG
LEEVEPRPATIGVGDGRSQEETDGKAEVDLRAMGMRVNTKDAVTTDWAWE
HGRPDANADDEGWTNLETWREDLGGDSDTSEFFVPPEGGPTARPERPSGK
GFQEVGGVLRRPTMLEILEGKLPLGEENGDKQEDGLVDTDEATGELVLPE
NMEEIMAEMRALAQQELDRRKQRHPHLRDDDDDNNDDVEEQPRGEAGWLE
EEGNDELLDEDEGEEGDEFGSEMEMNLAGVDAESRDRAKLERLLAKLSGS
FGGEDGVDDPENDDPERRVEANAVFDPSAGTSPDELAPPRYEEAPREDDE
EECEGWTPLMHEGLRDRTVALLGVVRLLEADAMEAARREDEKMGFPRGSG
GTAGPAVQATMRARLRCLTESRRCKKAIEFIEQEYPREGAKLDNKAALQI
VEMYINTRGVGLAEAFEGKCRTEYGLTPDRRILGAILNARARRAYAWDHE
VPHVERVLDALQQHRIKPHENELRFVRKIVDKGKLNHSWLPADPEANVKR
VSWVD*
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