prot_H-elongata_contig54580.12843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig54580.12843.1
Unique Name	prot_H-elongata_contig54580.12843.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	120

Homology

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A6H5JD21_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD21_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 7.110e-47
Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 0

Query:    1 MLLLLRCRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            MLLLLRCR+ L RRGI   SYGEV  AA+GR G + VDVSLFLSQ+GYCVVY IFV +N+GP L  AF   P WL GT+AL++ QAC+Q+PLS VR+L+YLG GML+AN+CVF GL++IL
Sbjct:   96 MLLLLRCRERLVRRGIPTVSYGEVALAAVGRVGYVAVDVSLFLSQLGYCVVYLIFVQQNIGPSLREAFPSQPAWLTGTMALMVIQACIQIPLSWVRQLKYLGAGMLIANICVFGGLLLIL 215

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: D7FZM6_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM6_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 5.920e-46
Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 0

Query:    1 MLLLLRCRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            MLLLLRCR+ L RRGI   SYGEV  AA+GR G + VDVSLFLSQ+GYCVVY IFV +N+GP L  AF   P WL GT+AL++ QAC+Q+PLS VR+L+YLG GML+AN+CVF GL++IL
Sbjct:  257 MLLLLRCRERLVRRGIPTVSYGEVALAAVGRVGYVAVDVSLFLSQLGYCVVYLIFVQQNIGPSLREAFPSQPAWLTGTMALMIIQACIQIPLSWVRQLKYLGAGMLIANICVFGGLLLIL 376

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A2P4Y026_9STRA (Vacuolar amino acid transporter (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y026_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.690e-18
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 0

Query:    7 CRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            C ++L R G    SYG VG  A G+ GR+ V++SL LSQIG+C  Y IFV +N+G ++  AF         ++ LI+ Q  +  PLS VR++EY  +  L A++ +  GLV I+
Sbjct:   51 CSNVLLRNGRTNVSYGLVGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVILAAFGIERTVASSSLTLIMLQILLYTPLSWVRRIEYFALTNLFADLLILFGLVYII 164

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A0P1AN01_PLAHL (Vacuolar amino acid n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN01_PLAHL)

HSP 1 Score: 88.6 bits (218), Expect = 4.230e-18
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 0

Query:    1 MLLLLRCRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L +C +ML + G    SYG +G  A G+ GRI V++SL LSQ G+C  Y IFV +N+G ++  AF         ++ LI+ Q  +  PLS VR++EY  +  L A++ +  G+V IL
Sbjct:  200 MLRLAKCSNMLLQNGRSNVSYGLIGEKACGKLGRIAVNISLVLSQTGFCCSYLIFVEKNIGEVILAAFGIQRTIASSSLTLIMLQILLYTPLSWVRRIEYFALTNLFADLLILFGIVYIL 319

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: H3GRM9_PHYRM (Aa_trans domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRM9_PHYRM)

HSP 1 Score: 88.2 bits (217), Expect = 6.030e-18
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 0

Query:    1 MLLLLRCRDMLAR-RGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C ++L R RG    SYG VG  A G+ GR+ V++SL LSQIG+C  Y IFV +N+G ++  AF+        ++ LI+ Q  +  PLS VR++EY  +  L A++ +  G+V I+
Sbjct:  205 MLRLTECSNVLLRERGRTNVSYGLVGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVILAAFNIQSTTASSSLTLIMLQILLYTPLSWVRRIEYFALTNLFADLLILFGIVYII 325

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A3M6VUN4_9STRA (Aa_trans domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 3.920e-17
Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 0

Query:    1 MLLLLRCRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C + + +R   + SYG +G  A G+ GR+ V++SL LSQIG+C  Y IFV +N+G ++  AF         ++ LI+ Q  +  PL+ VR++EY  +  L A++ +  G+V I+
Sbjct:  208 MLRLTACSNAVRKRNRSSVSYGLIGEKAFGKVGRVAVNISLVLSQIGFCCSYLIFVEKNIGEVILAAFGIQRTTASSSLTLIMLQILLYTPLTWVRRIEYFALTNLFADLLILFGIVYIM 327

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A421G7L0_9STRA (Aa_trans domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G7L0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.350e-17
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 0

Query:    1 MLLLLRCRDMLARR-GIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C ++L R  G    SYG VG  A G+ GR+ V++SL LSQ+G+C  Y IFV +N+G ++  AF+        ++ LIL Q  +  PLS VR++EY  +  L A++ +  G+V I+
Sbjct:  207 MLRLTSCSNVLLREPGHTNVSYGLVGEKAFGKIGRVAVNISLVLSQVGFCCSYLIFVEKNIGEVILAAFNIQRTGASSSLTLILLQIILYTPLSWVRRIEYFALTNLFADLLILFGIVYII 327

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: K3X5P2_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P2_GLOUD)

HSP 1 Score: 85.5 bits (210), Expect = 5.370e-17
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 0

Query:    1 MLLLLRCRDMLARR-GIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C + + R  G    SYG++G  + GRAGR  V+VSL LSQ+G+C  Y IFV +N+G ++E+ F         +  LIL Q  +  PL+ VR++EY  +  L+A+V +  GL+ I+
Sbjct:  214 MLRLTACSNAVMRMTGTGDVSYGQLGQRSFGRAGRFAVNVSLVLSQLGFCCSYLIFVEKNIGDIIEQVFHGSSSIASFSWVLILLQIPLYTPLTWVRRIEYFAMTNLIADVLILFGLIYII 334

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A662XLC3_9STRA (Aa_trans domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLC3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.360e-17
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 0

Query:    1 MLLLLRCRDMLAR-RGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C +++ R RG    SYG +G  + G+ GR+ V+VSL LSQIG+C  Y IFV +N+G ++  AF+        ++ LI  Q  +  PLS VR++EY  +  L A++ +  GLV IL
Sbjct:  223 MLRLTACSNVVLRERGRTNVSYGLLGERSFGKLGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEVILAAFNIQRSGASSSITLIALQILLYTPLSWVRRIEYFALTNLFADLLILFGLVYIL 343

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BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Match: A0A662XM46_9STRA (Aa_trans domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM46_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.030e-16
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 0

Query:    1 MLLLLRCRDM-LARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCVVYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEYLGVGMLVANVCVFSGLVVIL 120
            ML L  C ++ L+ RG    SYG +G  + G+ GR+ V+VSL LSQIG+C  Y IFV +N+G ++  AFS        ++ LI  Q  +  PL+ VR++EY  +  L A++ +  G+V IL
Sbjct:   64 MLRLTACSNVVLSERGRTNVSYGLLGEKSFGKLGRVAVNVSLVLSQIGFCCSYLIFVEKNIGEVILAAFSIQRSGASSSITLIALQILLYTPLTWVRRIEYFALTNLFADLLILFGIVYIL 184

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54580.12843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JD21_9PHAE	7.110e-47	65.83	Aa_trans domain-containing protein n=1 Tax=Ectocar...	[more]
D7FZM6_ECTSI	5.920e-46	65.83	Aa_trans domain-containing protein n=1 Tax=Ectocar...	[more]
A0A2P4Y026_9STRA	2.690e-18	40.35	Vacuolar amino acid transporter (Fragment) n=1 Tax...	[more]
A0A0P1AN01_PLAHL	4.230e-18	40.00	Vacuolar amino acid n=1 Tax=Plasmopara halstedii T...	[more]
H3GRM9_PHYRM	6.030e-18	40.50	Aa_trans domain-containing protein n=1 Tax=Phytoph...	[more]
A0A3M6VUN4_9STRA	3.920e-17	36.67	Aa_trans domain-containing protein n=1 Tax=Peronos...	[more]
A0A421G7L0_9STRA	5.350e-17	39.67	Aa_trans domain-containing protein n=4 Tax=Phytoph...	[more]
K3X5P2_GLOUD	5.370e-17	39.67	Aa_trans domain-containing protein n=1 Tax=Globisp...	[more]
A0A662XLC3_9STRA	7.360e-17	40.50	Aa_trans domain-containing protein n=1 Tax=Nothoph...	[more]
A0A662XM46_9STRA	1.030e-16	39.67	Aa_trans domain-containing protein (Fragment) n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 1..118 e-value: 2.2E-20 score: 72.7
None	No IPR available	PANTHER	PTHR22950:SF349	VACUOLAR AMINO ACID TRANSPORTER 4	coord: 1..112
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 1..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..55
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 96..99
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 120..120
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 100..119
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 56..74
None	No IPR available	TMHMM	TMhelix		coord: 73..95
None	No IPR available	TMHMM	TMhelix		coord: 100..119
None	No IPR available	TMHMM	TMhelix		coord: 41..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54580	contig	H-elongata_contig54580:395..1705 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54580.12843.1	mRNA_H-elongata_contig54580.12843.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig54580 395..1726 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig54580.12843.1 ID=prot_H-elongata_contig54580.12843.1|Name=mRNA_H-elongata_contig54580.12843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MLLLLRCRDMLARRGIMACSYGEVGYAALGRAGRICVDVSLFLSQIGYCV
VYFIFVAENLGPLLERAFSPHPPWLFGTVALILAQACVQVPLSLVRKLEY
LGVGMLVANVCVFSGLVVIL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM