prot_H-elongata_contig54559.12841.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54559.12841.1
Unique Nameprot_H-elongata_contig54559.12841.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
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BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Match: A0A6H5KLX5_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLX5_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.410e-36
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 0 
Query:   33 TPPEELEDQLRSALLQIGKSSAHLPPRHGCTFALHVEAQEGAQGEGS--DDNKDRNEASLVRSALQGGNWLLADDGAQRVQAESGQRRLVPIKSVRGPGLRLDLSAEMGDC 141
            T  +++EDQLRSALLQI KSSAHLP R GCTFALHVEA E  +G+    D  +D  ++S VRSAL+GG W+LAD  AQ V AE G+RR+VPIKSVRG GL L+LS EMGDC
Sbjct:  117 TSLQDVEDQLRSALLQIQKSSAHLPTRQGCTFALHVEAHEDNEGQVGRHDATQDYAQSSPVRSALRGGKWVLADSVAQGVLAEPGRRRIVPIKSVRGRGLSLNLSTEMGDC 227
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54559.12841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLX5_9PHAE1.410e-3664.86HORMA domain-containing protein n=2 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 4..140
e-value: 1.9E-9
score: 39.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54559contigH-elongata_contig54559:1730..2729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54559.12841.1mRNA_H-elongata_contig54559.12841.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54559 701..3360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54559.12841.1 ID=prot_H-elongata_contig54559.12841.1|Name=mRNA_H-elongata_contig54559.12841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MYITKYNQSRESLSNCECTNAIQGGWQPASKLTPPEELEDQLRSALLQIG
KSSAHLPPRHGCTFALHVEAQEGAQGEGSDDNKDRNEASLVRSALQGGNW
LLADDGAQRVQAESGQRRLVPIKSVRGPGLRLDLSAEMGDCYFDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf