prot_H-elongata_contig54532.12836.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54532.12836.1
Unique Nameprot_H-elongata_contig54532.12836.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length373
Homology
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A6H5KVE2_9PHAE (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVE2_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 2.940e-105
Identity = 200/415 (48.19%), Postives = 249/415 (60.00%), Query Frame = 0
Query:    3 TAATADEFDITEFDGLTRSELQAMCKRLQLRAVGKTCELVSRLREHQRKRKQQHEERDQLL--EKVTTHTHHTKDPP--SPSSEELIVDVVSE-------EHYSPGSSFALDLPGTSAIAVQPQLSYSAVGPDRYRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGV---------------------------------NVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLEHVLEERRKAATNIVADGPSDRGYSSVFHFTSEAIWNRAP 373
            TAAT  ++   + + L+RSELQ +CK+L LRAVGKT EL+SR+ E        H  R++ L  +  TT +  +  P   +P  E  + +++S         +YS GS      P             +    +  R  F EL+DEQWA V +LG+LL EWNG+MNLISR+DI NVM RHVVPCLAMAKA+  +DG                                  +VLDVGTGGGLPGLP+AI +P V+FTLIDG GKKI AV DMA+RLGL NVR FH RAE+V+E FDF++GRAV +LPKFVGF+DKNLK N  R    T N  D          S+  LKRG+LYMRGE+ +EEL ELGARPSTV+ L+ VLEE  +     +  G  DRGYSS+FHFTSEAIWNR P
Sbjct:   88 TAATQQQYTAQDLEALSRSELQGLCKKLNLRAVGKTSELLSRVLESD-----DHARREKALGTKPATTESTASSSPKDEAPMGESTMAELLSSVDDGGNNTNYSSGSQEKAT-PXXXXXXXXXAAPSTDFFLEDIRPVFDELSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDGTYGEMRGAGEDPSRTLPPDPQPPPRREYLPSLSWSVLDVGTGGGLPGLPLAICFPMVKFTLIDGRGKKIKAVADMADRLGLRNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNDGR----TSNPADSSS-----SSSNNSLKRGILYMRGEVSEEELAELGARPSTVIPLQRVLEEAGQDGDVGLGGGADDRGYSSIFHFTSEAIWNRVP 487          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A7S2V0Z1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0Z1_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.280e-54
Identity = 100/221 (45.25%), Postives = 141/221 (63.80%), Query Frame = 0
Query:  131 PELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPP---LKRGVLYMRGEIDQEELDELGARPSTVLSLEHVLEERRKAATNIV 348
            P+L+++QWA +E+LG+LL EWN ++NLISR+DI+NVM RH++PCLAMA +I +  G  V+DVGTGGGLPGLP+AI  PQ +F L+D  GKKI AV DMAERLGL +V+A HTR ED++E  D I+GR+V +LP+F+ +  KNL                   VH       PP     RG+ Y++G   ++EL  +  +P   ++L  V      +  N++
Sbjct:   60 PKLSNDQWAQLEKLGDLLTEWNEKVNLISRKDIDNVMVRHILPCLAMAASIDIDPGWTVMDVGTGGGLPGLPLAICNPQTQFLLVDARGKKIEAVADMAERLGLAHVKALHTRVEDINEPCDLILGRSVTALPRFMMWTRKNL-------------------VH-----PGPPGSTKMRGIAYIKGGNFEDELGGIDLKPEKAIALNTVFSSLADSDKNVL 256          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A355SZU0_9BACT (Ribosomal RNA small subunit methyltransferase G n=2 Tax=Opitutae TaxID=414999 RepID=A0A355SZU0_9BACT)

HSP 1 Score: 178 bits (452), Expect = 8.710e-51
Identity = 92/211 (43.60%), Postives = 134/211 (63.51%), Query Frame = 0
Query:  124 DRYRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLE 334
            ++ ++ FP +A+E W ++++  +LL EWN ++NLISR+DIE++  RH+  CLA+   +KL +G  ++DVGTGGG PG+ MAI YPQ +FTLID  GKKI  V D+  +LGL NV A  TRAE+V + FDF+ GRAV +LP+F  ++  N++R                      EK++ P   GVLY +G    +EL+ LG RP  V++LE
Sbjct:    4 EQLKQQFPNIAEETWPVLQKWSQLLREWNEKINLISRKDIEHLEERHLSHCLAITNHLKLMNGTRIMDVGTGGGFPGIIMAICYPQAQFTLIDSIGKKITVVQDLINQLGLKNVEAKQTRAEEVKKQFDFVTGRAVKNLPEFFMWIKNNVRRG---------------------EKNTIP--NGVLYWKGGEMDDELEVLGIRPRKVINLE 191          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A6N4WUR2_9BACT (Ribosomal RNA small subunit methyltransferase G n=2 Tax=Lentimonas TaxID=417293 RepID=A0A6N4WUR2_9BACT)

HSP 1 Score: 178 bits (452), Expect = 8.710e-51
Identity = 90/211 (42.65%), Postives = 134/211 (63.51%), Query Frame = 0
Query:  124 DRYRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLE 334
            ++ ++ FP +++++W ++E+   LL +WN ++NLISR+DIE +  RH+  CLA+   +KL +G  ++DVGTGGG PG+ MAI YPQ +F LID  GKKI  V D+ ++LGL NV A HTRAE + + FDF+ GRAV +LP++  ++ KN++R                      EK++ P   GVLY +G    +ELD LG RP  V++LE
Sbjct:    4 EQLKEQFPNISEDKWPVLEKWAVLLRDWNSKINLISRKDIEYLEERHLSHCLAITNHLKLMNGTRIMDVGTGGGFPGIIMAICYPQAQFLLIDAIGKKIKVVQDLIDQLGLKNVEAKHTRAEAITKQFDFVTGRAVKNLPEYFSWIKKNVRRG---------------------EKNTIP--NGVLYWKGGDMDDELDTLGIRPRKVINLE 191          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A350ARR8_9BACT (Ribosomal RNA small subunit methyltransferase G n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A350ARR8_9BACT)

HSP 1 Score: 175 bits (443), Expect = 1.640e-49
Identity = 92/208 (44.23%), Postives = 127/208 (61.06%), Query Frame = 0
Query:  127 RKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLE 334
            R  FP ++DE W ++E+   LL EWN ++NLISR+DIE++   H+  CL +   +KL +G  V+DVGTGGG PG+ MAI YPQ +FTLID  GKKI  V D+ ++LGL NV A  TRAE +++ FDFI GRAV +LP++  ++  N+ R   RN+                      +  GVLY +G    +ELD LG RP  V++LE
Sbjct:    5 RAQFPNVSDETWPILEKWAVLLREWNEKINLISRKDIEHLEEHHLSHCLEITNHLKLMNGARVMDVGTGGGFPGIIMAICYPQAQFTLIDSIGKKIKVVQDLVDQLGLKNVEAKQTRAEQINKEFDFITGRAVKNLPEYFSWIKGNV-RKGQRNS----------------------IPNGVLYWKGGDMDDELDALGIRPRKVINLE 189          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A2E8KST0_9FLAO (Ribosomal RNA small subunit methyltransferase G n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E8KST0_9FLAO)

HSP 1 Score: 174 bits (441), Expect = 2.330e-49
Identity = 89/207 (43.00%), Postives = 129/207 (62.32%), Query Frame = 0
Query:  127 RKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSL 333
            RKHFP+L D+Q A  E+LGE    WN ++NL+SR+DI+   +RHV+  LA+AKA+K  +G  +LDVGTGGGLPGLP+AI YP+V+FTL D  GKKI  V ++ E +GL N +A+H RA +V   FDFI+ RAV  + KF+ +V+  +++                           P   G+LY++G   ++EL+E+  R S +LS+
Sbjct:    5 RKHFPDLTDKQVAQFEKLGESFVHWNSQINLVSRKDIDEFYTRHVLHSLAIAKAMKFAEGSEILDVGTGGGLPGLPLAILYPEVKFTLCDSIGKKIKVVKELIEDVGLKNTKAYHRRANEVPGKFDFIVSRAVTRMNKFIPWVENKIRKRCIN-----------------------PWPNGILYLKGGDLRQELNEIN-RDSEILSI 187          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A2D7F536_9BACT (Ribosomal RNA small subunit methyltransferase G n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A2D7F536_9BACT)

HSP 1 Score: 173 bits (439), Expect = 6.460e-49
Identity = 92/212 (43.40%), Postives = 129/212 (60.85%), Query Frame = 0
Query:  126 YRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLEHVL 337
            Y++ FP + ++ W ++ER  ELL EWN ++NLISR+DI+ +  RH++ CLA+   + L  G  +LDVGTGGGLPGLPMAI YPQ +FTLID   KK+  V  +A+ LGL NV A   RAE +   FDF+ GRAV +LP+F+ ++  NL++               G  H         L  GV+Y +G   + EL+ LG +  TV+ LE+VL
Sbjct:    6 YQQLFPNIPEDAWPVLERWAELLREWNTKINLISRKDIDALEERHLLHCLAITNVLILNKGARILDVGTGGGLPGLPMAICYPQAKFTLIDSIAKKVEVVQTIADELGLKNVVARQVRAEALKTQFDFVTGRAVKNLPEFLSWIQNNLEK---------------GDXH--------SLPNGVIYWKGGSIEAELNPLGIQSKTVVELENVL 194          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: W7TNU2_9STRA (16s rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNU2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.660e-49
Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 0
Query:  107 TSAIAVQPQLSYSAVGPDRYRK-HFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAI-KLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVE 296
            ++A   Q Q+  S  G     K  FPEL   QW  +ERLG L+ EWN ++N+ISR+D+ENV+S HV+PC+ ++K + K  +G  V+DVGTGGG PGLP+AI  PQV+F L+D  GKK+  V DMA RLGL NVR  HTR E+V E F+F+ GR+V ++P+FVG+V   L    S          DDG+++++
Sbjct:   44 SAARDPQKQIPVSRAGFTAQAKARFPELTPVQWERLERLGALVQEWNCKVNVISRKDVENVLSHHVLPCMGISKLLSKAAEGTKVMDVGTGGGFPGLPLAICCPQVKFWLVDSIGKKVRVVGDMAVRLGLQNVRVRHTRVEEVRERFNFVTGRSVTAMPRFVGWVKDKLHAAPSAPLKGVP---DDGILYIK 232          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: D5EM03_CORAD (Ribosomal RNA small subunit methyltransferase G n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EM03_CORAD)

HSP 1 Score: 171 bits (433), Expect = 4.900e-48
Identity = 91/216 (42.13%), Postives = 127/216 (58.80%), Query Frame = 0
Query:  124 DRYRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSLEHVLEE 339
            ++ R  FP + D  W ++     LL EWN ++NLISR+DIE++  RH+  CL +   ++L +G  ++DVGTGGG PGL MAI YPQ +FTL+D  GKKI  V D+AERLGL NV A   RAE + + FDFI GRAV +LP++  ++  NL+R   RN+                      +  GVLY +G   + EL+ LG RP   + +E  LE+
Sbjct:    2 EQIRARFPNVDDGTWTLLAEWATLLREWNEKINLISRKDIEHLEERHLAHCLVITNHLRLMNGARIMDVGTGGGFPGLIMAICYPQAQFTLVDSIGKKIGVVADIAERLGLRNVEARQCRAESIRKEFDFITGRAVKNLPEYFSWIKGNLRRG-QRNS----------------------IPNGVLYWKGGELEPELEALGIRPRLSIDVEQALED 194          
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Match: A0A368BBI9_9BACT (Ribosomal RNA small subunit methyltransferase G n=2 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A368BBI9_9BACT)

HSP 1 Score: 169 bits (427), Expect = 4.300e-47
Identity = 91/210 (43.33%), Postives = 125/210 (59.52%), Query Frame = 0
Query:  124 DRYRKHFPELADEQWAMVERLGELLAEWNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPGLPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHELFDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKSSPPLKRGVLYMRGEIDQEELDELGARPSTVLSL 333
            D  RK FP++ +  W ++E    LL EWN ++NLISR+DIE + +RH+  CL++   +KL  G  ++DVGTGGG PG+ MAI YPQ  FTLID  GKKI  V D+A++L L NV A   RAE+V + FDFI GRAV +LP++  ++  N++R                      E++S P   GVLY +G    +EL  LG RP   +SL
Sbjct:    2 DSIRKQFPQIEEAAWPLLEAWSALLREWNTKINLISRKDIEYLEARHLSHCLSITNHLKLMSGARIMDVGTGGGFPGIIMAICYPQAHFTLIDSIGKKITVVQDLADKLELKNVEARQCRAEEVKKKFDFITGRAVKNLPEYFSWIKDNVRRG---------------------ERNSIP--NGVLYWKGGELDDELAALGIRPRKTISL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54532.12836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVE2_9PHAE2.940e-10548.19SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2V0Z1_9STRA1.280e-5445.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A355SZU0_9BACT8.710e-5143.60Ribosomal RNA small subunit methyltransferase G n=... [more]
A0A6N4WUR2_9BACT8.710e-5142.65Ribosomal RNA small subunit methyltransferase G n=... [more]
A0A350ARR8_9BACT1.640e-4944.23Ribosomal RNA small subunit methyltransferase G n=... [more]
A0A2E8KST0_9FLAO2.330e-4943.00Ribosomal RNA small subunit methyltransferase G n=... [more]
A0A2D7F536_9BACT6.460e-4943.40Ribosomal RNA small subunit methyltransferase G n=... [more]
W7TNU2_9STRA7.660e-4947.4016s rrna methyltransferase n=1 Tax=Nannochloropsis... [more]
D5EM03_CORAD4.900e-4842.13Ribosomal RNA small subunit methyltransferase G n=... [more]
A0A368BBI9_9BACT4.300e-4743.33Ribosomal RNA small subunit methyltransferase G n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableGENE3D3.40.50.150coord: 124..350
e-value: 1.3E-48
score: 167.3
NoneNo IPR availablePANTHERPTHR31760:SF0RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE Gcoord: 131..330
IPR003682rRNA small subunit methyltransferase GPFAMPF02527GidBcoord: 141..276
e-value: 4.7E-34
score: 117.3
IPR003682rRNA small subunit methyltransferase GTIGRFAMTIGR00138TIGR00138coord: 143..276
e-value: 2.8E-32
score: 109.8
IPR003682rRNA small subunit methyltransferase GPANTHERPTHR31760FAMILY NOT NAMEDcoord: 131..330
IPR003682rRNA small subunit methyltransferase GHAMAPMF_0007416SrRNA_methyltr_Gcoord: 130..344
score: 22.819
IPR003034SAP domainPROSITEPS50800SAPcoord: 15..49
score: 8.728
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 128..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54532contigH-elongata_contig54532:977..3521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54532.12836.1mRNA_H-elongata_contig54532.12836.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54532 977..3521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54532.12836.1 ID=prot_H-elongata_contig54532.12836.1|Name=mRNA_H-elongata_contig54532.12836.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=373bp
ATTAATADEFDITEFDGLTRSELQAMCKRLQLRAVGKTCELVSRLREHQR
KRKQQHEERDQLLEKVTTHTHHTKDPPSPSSEELIVDVVSEEHYSPGSSF
ALDLPGTSAIAVQPQLSYSAVGPDRYRKHFPELADEQWAMVERLGELLAE
WNGRMNLISRRDIENVMSRHVVPCLAMAKAIKLQDGVNVLDVGTGGGLPG
LPMAIYYPQVEFTLIDGTGKKIHAVHDMAERLGLTNVRAFHTRAEDVHEL
FDFIIGRAVASLPKFVGFVDKNLKRNASRNTMSTVNGDDDGVVHVEVEKS
SPPLKRGVLYMRGEIDQEELDELGARPSTVLSLEHVLEERRKAATNIVAD
GPSDRGYSSVFHFTSEAIWNRAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003682rRNA_ssu_MeTfrase_G
IPR003034SAP_dom
IPR029063SAM-dependent_MTases