prot_H-elongata_contig54500.12834.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54500.12834.1
Unique Nameprot_H-elongata_contig54500.12834.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A6H5JCM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM3_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 3.080e-49
Identity = 91/121 (75.21%), Postives = 107/121 (88.43%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGT-AKTVLIQYMIGKGTMDDAMMPLIHRKQWTIKSTV 120
            M+ LE GL++IGV SVRIDG+T+Q +RQPIVDRFQ   ++SVILL+ITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHR G  AKTVLI+Y++G+GTMDD M+  IHRKQ T++STV
Sbjct:  399 MDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSSSVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTV 519          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.240e-48
Identity = 90/121 (74.38%), Postives = 107/121 (88.43%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGT-AKTVLIQYMIGKGTMDDAMMPLIHRKQWTIKSTV 120
            M+ LE GL++IGV SVRIDG+T+Q +RQPIVDRFQ   ++SVILL+ITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHR G  AKTVLI+Y++G+GTMDD ++  IHRKQ T++STV
Sbjct:  801 MDALERGLDEIGVCSVRIDGSTAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTV 921          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A835Z711_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z711_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.000e-33
Identity = 66/120 (55.00%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKG-TMDDAMMPLIHRKQWTIKST 119
            ++ +E  ++D GV  VRIDG T + +RQ +VDRFQ +  + +ILL+ITAAGVGITLTA S A FAELYWTPG MAQAEDRIHR G     LIQ+++    TMD  ++  I  KQ T++ST
Sbjct:   18 LDGIERAIKDCGVEMVRIDGNTPKGKRQMLVDRFQTERRVRMILLSITAAGVGITLTAGSIAAFAELYWTPGVMAQAEDRIHRIGQKSQCLIQFLVSDTPTMDQHLLSSISLKQKTLQST 137          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A7S0TEQ7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TEQ7_HEMAN)

HSP 1 Score: 118 bits (295), Expect = 2.600e-31
Identity = 59/112 (52.68%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRK 112
            ++ LEA +    V  +RIDG    ++RQ +VD FQ+D+ + V +L +TAAGVG+TLTA+S  VFAEL WTPG M QAEDR+HR G  + V + Y+IGKGT+DD + P I RK
Sbjct:   43 LDGLEAAVRKAKVGLIRIDGGVDASQRQGLVDSFQKDEGVRVAVLGLTAAGVGLTLTASSTVVFAELNWTPGVMVQAEDRVHRIGQRECVNVHYLIGKGTLDDVIWPGIVRK 154          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A7S2APM7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2APM7_9DINO)

HSP 1 Score: 114 bits (284), Expect = 2.230e-30
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRK 112
            M+ +E  L + G  S+RIDG T  A+R  +V +FQ ++ + V +L+ITAAG G+TLTAA   VF ELYW PG M QAEDR HR G   +V +QY++  GT+DDA+   + RK
Sbjct:    1 MDAVERKLRERGTPSIRIDGKTHHAQRPGLVAKFQEEECVRVAVLSITAAGTGLTLTAAQTVVFGELYWVPGQMHQAEDRAHRIGQHDSVAVQYLVAAGTLDDALFKALERK 112          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A3P7YI71_9BILA (Helicase C-terminal domain-containing protein n=2 Tax=Brugia timori TaxID=42155 RepID=A0A3P7YI71_9BILA)

HSP 1 Score: 113 bits (282), Expect = 1.340e-29
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:   12 GVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRK 112
            G+RS+RIDG T+   R      FQ +D + V +L+ITAAG+G+TLTAAS  VFAEL+W PG++ QAEDR HR G   +V +QY+I KGT DD + PLI +K
Sbjct:    7 GLRSIRIDGTTASRLRDEQCRLFQENDDVMVAVLSITAAGIGVTLTAASVVVFAELHWNPGTLKQAEDRAHRLGQKDSVFVQYLIAKGTADDILWPLIQKK 107          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A1S3JIJ9_LINUN (DNA annealing helicase and endonuclease ZRANB3-like isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIJ9_LINUN)

HSP 1 Score: 121 bits (303), Expect = 1.670e-29
Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRKQWTIKSTV 120
            +N L+  L D+ ++ +RIDG     ER  +VD FQ+D    V LL+ITAAGVG+TLTAAS  VFAELYWTPG++ Q EDR HR G    V + Y++ KGTMD+ M  +I+RK   + +T+
Sbjct:  361 LNGLQETLHDLDIKFIRIDGNVPPKERGMLVDTFQKDANTRVALLSITAAGVGLTLTAASLVVFAELYWTPGTLEQCEDRAHRIGQQNRVNVHYLVAKGTMDEWMWSMINRKTTVVTATL 480          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A5N5T6V2_9CRUS (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5T6V2_9CRUS)

HSP 1 Score: 115 bits (288), Expect = 2.540e-29
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRK 112
            +N++    E+  V  +RIDG+T+   RQ +VD FQ D    V +L+ITAA  GITLTAA   VFAELYW PG + QAEDR HR G   +VL+QY++ KGT DD + PL+  K
Sbjct:   73 LNSISETCEEQKVHYIRIDGSTNSESRQKLVDHFQTDPNTRVAVLSITAASSGITLTAAQLVVFAELYWNPGLLIQAEDRAHRIGQVDSVLVQYLVAKGTADDFIWPLVQSK 184          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A0C2C8X4_9BILA (Helicase protein n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2C8X4_9BILA)

HSP 1 Score: 112 bits (281), Expect = 3.480e-29
Identity = 54/112 (48.21%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    1 MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRK 112
            ++T++  ++   ++SVRIDG TS  +R  +   FQ D  + V +L++TAAGVGITLTAAS  VFAEL+W PG++ QAEDR HR G   +V +QY+I + T DD + PL+ +K
Sbjct:   54 LDTVQVEVQKRNLKSVRIDGQTSSKDRGNLCQAFQEDPDVEVAILSMTAAGVGITLTAASVVVFAELHWNPGTLLQAEDRAHRVGQKDSVFVQYLIARNTADDFIWPLVQKK 165          
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Match: A0A182ESM8_ONCOC (Helicase C-terminal domain-containing protein n=1 Tax=Onchocerca ochengi TaxID=42157 RepID=A0A182ESM8_ONCOC)

HSP 1 Score: 115 bits (288), Expect = 5.440e-29
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   12 GVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGTMDDAMMPLIHRKQWTIKS 118
            G+RS+RIDGAT    R      FQ +D + V +L+ITAAG+G+TLTAAS  +FAEL+W PG++ QAEDR HR G   +V +QY+I KGT DD + PLI +K   ++S
Sbjct:  150 GLRSIRIDGATVSRSRDEQCRLFQENDDVMVAILSITAAGIGVTLTAASVVIFAELHWNPGTLKQAEDRAHRLGQKDSVFVQYLIAKGTADDVLWPLIQKKLDVLQS 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54500.12834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCM3_9PHAE3.080e-4975.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK86_ECTSI2.240e-4874.38Harp (Smarcal1)-related n=1 Tax=Ectocarpus silicul... [more]
A0A835Z711_9STRA2.000e-3355.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S0TEQ7_HEMAN2.600e-3152.68Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2APM7_9DINO2.230e-3049.11Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A3P7YI71_9BILA1.340e-2954.46Helicase C-terminal domain-containing protein n=2 ... [more]
A0A1S3JIJ9_LINUN1.670e-2950.00DNA annealing helicase and endonuclease ZRANB3-lik... [more]
A0A5N5T6V2_9CRUS2.540e-2950.89SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A0C2C8X4_9BILA3.480e-2948.21Helicase protein n=1 Tax=Ancylostoma duodenale Tax... [more]
A0A182ESM8_ONCOC5.440e-2952.34Helicase C-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 2..85
e-value: 2.2E-16
score: 70.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 9..85
e-value: 2.2E-11
score: 44.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..120
score: 10.942
NoneNo IPR availableGENE3D3.40.50.300coord: 1..120
e-value: 6.2E-32
score: 112.6
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 1..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..120
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
IPR030101SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1PANTHERPTHR45766:SF3SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1coord: 1..117
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54500contigH-elongata_contig54500:1545..2643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54500.12834.1mRNA_H-elongata_contig54500.12834.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54500 1536..2643 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54500.12834.1 ID=prot_H-elongata_contig54500.12834.1|Name=mRNA_H-elongata_contig54500.12834.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MNTLEAGLEDIGVRSVRIDGATSQAERQPIVDRFQRDDTLSVILLAITAA
GVGITLTAASCAVFAELYWTPGSMAQAEDRIHRSGTAKTVLIQYMIGKGT
MDDAMMPLIHRKQWTIKSTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR030101HARP(SMARCAL1)
IPR027417P-loop_NTPase