prot_H-elongata_contig54413.12821.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54413.12821.1
Unique Nameprot_H-elongata_contig54413.12821.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
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BLAST of mRNA_H-elongata_contig54413.12821.1 vs. uniprot
Match: D7FWY6_ECTSI (MORN repeat variant family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY6_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 5.890e-41
Identity = 144/173 (83.24%), Postives = 153/173 (88.44%), Query Frame = 0 
Query:   14 DELHGIGRLTFSPGSILEEVYEGEFCRGVKHGRGVYVYPKGSGLVXXXXXXXXXXXXXXLLRFEDGSFYKGQFRKEKKHGTGCMVWADGSQYLGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVVGTKGRFTLLTGLAHDDRVHLRVFGY 186
            DE+HG GRLT  PGSILEEVY+G+F RG+KHG GVYVY KG GLVXXXXXXXXXXXXXXLLRF D SFYKGQF +E+KHGTGCMVWA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+QV+GTKGRFTLLTG AH+DRVHLRVFGY
Sbjct:  787 DEIHGRGRLTICPGSILEEVYDGDFVRGIKHGNGVYVYRKGDGLVXXXXXXXXXXXXXXLLRFADDSFYKGQFHRERKHGTGCMVWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQVLGTKGRFTLLTGPAHEDRVHLRVFGY 959
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BLAST of mRNA_H-elongata_contig54413.12821.1 vs. uniprot
Match: A0A6H5KQH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 6.980e-25
Identity = 127/167 (76.05%), Postives = 133/167 (79.64%), Query Frame = 0 
Query:   20 GRLTFSPGSILEEVYEGEFCRGVKHGRGVYVYPKGSGLVXXXXXXXXXXXXXXLLRFEDGSFYKGQFRKEKKHGTGCMVWADGSQYLGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVVGTKGRFTLLTGLAHDDRVHLRVFGY 186
            GRLT  PGSILEEVY+G+F RG+KHG GVYVY KG GLVXXXXXXXXXXXXXXLLRF D SFYK                    Q    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+QV+GTKGRFTLLTG AH+DRVHLRVFGY
Sbjct:  193 GRLTICPGSILEEVYDGDFVRGIKHGHGVYVYRKGDGLVXXXXXXXXXXXXXXLLRFADXSFYKXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQVLGTKGRFTLLTGPAHEDRVHLRVFGY 359
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BLAST of mRNA_H-elongata_contig54413.12821.1 vs. uniprot
Match: A0A7S1FPP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FPP1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.010e-7
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0 
Query:    1 YANGDIYRGDFSHDELHGIGRLTFSPGSILEEVYEGEFCRGVKHGRGVYVYPKGSGLVXXXXXXXXXXXXXXLLRFEDGSF 81
            Y +G +Y G+F  D   G G +TF PG++LEE Y+G +    +HG+G   Y + SG   XXXXXXXXXXXXX L F+DGSF
Sbjct:    5 YTDGTVYDGNFLDDVRCGRGTMTFCPGTVLEEKYDGSWENDRRHGQGRQTYDQRSGRTYXXXXXXXXXXXXXRLDFKDGSF 85
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BLAST of mRNA_H-elongata_contig54413.12821.1 vs. uniprot
Match: A0A8J2WXV3_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXV3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.530e-7
Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = 0 
Query:   25 SPGSILEEVYEGEFCRGVKHGRGVYVYPKGSGL-VXXXXXXXXXXXXXXLLRFEDGSFYKGQFRKEKKHGTGCMVWADGSQYLGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVVGTKGRFTLLTGLAH---DDRVHLRVFGY 186
            SPG+ILEE Y+G++  G +HG G+Y Y     +  XXXXXXXXXXXXXX   ++DG +YKG F +E+  G G  VW DGSQ    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++VG +G++ LL G      +D V LRVFGY
Sbjct:  683 SPGNILEESYDGDWVEGRRHGIGLYTYKFQDPIEXXXXXXXXXXXXXXXXXXYKDGGYYKGDFLRERMTGRGLYVWPDGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVG-RGKYKLLVGTGKGGKEDTVGLRVFGY 847
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54413.12821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWY6_ECTSI5.890e-4183.24MORN repeat variant family protein n=1 Tax=Ectocar... [more]
A0A6H5KQH2_9PHAE6.980e-2576.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1FPP1_9STRA3.010e-751.85Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A8J2WXV3_9STRA5.530e-763.86Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003409MORN motifSMARTSM00698morncoord: 5..26
e-value: 0.44
score: 16.8
coord: 149..171
e-value: 7.8
score: 7.4
coord: 126..147
e-value: 54.0
score: 1.1
coord: 80..101
e-value: 4.2E-4
score: 29.6
coord: 103..124
e-value: 0.013
score: 24.6
coord: 57..78
e-value: 3.4E-4
score: 30.0
coord: 32..53
e-value: 6.5E-4
score: 29.0
IPR003409MORN motifPFAMPF02493MORNcoord: 151..159
e-value: 2.8
score: 8.0
coord: 7..28
e-value: 0.001
score: 18.8
coord: 59..80
e-value: 2.3E-6
score: 27.2
coord: 105..124
e-value: 9.2E-4
score: 19.0
coord: 34..55
e-value: 1.6E-5
score: 24.5
coord: 128..149
e-value: 0.039
score: 13.8
coord: 82..103
e-value: 9.5E-5
score: 22.1
NoneNo IPR availableGENE3D2.20.110.10coord: 1..61
e-value: 2.0E-9
score: 39.4
coord: 106..174
e-value: 3.1E-11
score: 45.3
NoneNo IPR availablePANTHERPTHR23084:SF123MORN REPEAT-CONTAINING PROTEIN 1coord: 1..122
NoneNo IPR availablePANTHERPTHR23084PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATEDcoord: 32..160
NoneNo IPR availablePANTHERPTHR23084PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR23084:SF123MORN REPEAT-CONTAINING PROTEIN 1coord: 32..160
NoneNo IPR availableSUPERFAMILY82185Histone H3 K4-specific methyltransferase SET7/9 N-terminal domaincoord: 33..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54413contigH-elongata_contig54413:517..2662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54413.12821.1mRNA_H-elongata_contig54413.12821.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54413 517..2662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54413.12821.1 ID=prot_H-elongata_contig54413.12821.1|Name=mRNA_H-elongata_contig54413.12821.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
YANGDIYRGDFSHDELHGIGRLTFSPGSILEEVYEGEFCRGVKHGRGVYV
YPKGSGLVYDGDWEDGLRHGEGLLRFEDGSFYKGQFRKEKKHGTGCMVWA
DGSQYLGKWVNNLRHGEGTLLHADKSIFKGQFWLDKKNGSGTLTSLDGNC
YEGEWQDNQVVGTKGRFTLLTGLAHDDRVHLRVFGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN