prot_H-elongata_contig54391.12814.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54391.12814.1
Unique Nameprot_H-elongata_contig54391.12814.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
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BLAST of mRNA_H-elongata_contig54391.12814.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.360e-25
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 0 
Query:    1 GRLYFQAGGEKDVQRWLVPLRVLVKFCDFENDGRTLPKEFLDLAIRRRLVRAQNHRGQTPLHLAAAFTGSEA--------SVIGASEVVEAIQRVSTWLIEYGADPNTYDGQ 104
            GRLYFQA  E ++Q+WL+ LR LVKF DF+N+ R LP E+L    R RLVRA N+ G+TPLHLA AF G           S     EV  A+QRV+TWL+E GA+PN  D Q
Sbjct: 1574 GRLYFQASNEVELQQWLLALRALVKFYDFKNEKRQLPMEYLHQGTRERLVRATNNLGETPLHLAVAFAGRTGMGDRRESDSGCDKREVGIAVQRVATWLLENGANPNACDEQ 1685
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54391.12814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6I1_ECTSI1.360e-2552.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 23..104
e-value: 9.8E-7
score: 30.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 50..102
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 57..99
e-value: 1.6E-4
score: 22.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..103
score: 8.87
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 1..25
score: 7.263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54391contigH-elongata_contig54391:419..1607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54391.12814.1mRNA_H-elongata_contig54391.12814.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54391 419..1609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54391.12814.1 ID=prot_H-elongata_contig54391.12814.1|Name=mRNA_H-elongata_contig54391.12814.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
GRLYFQAGGEKDVQRWLVPLRVLVKFCDFENDGRTLPKEFLDLAIRRRLV
RAQNHRGQTPLHLAAAFTGSEASVIGASEVVEAIQRVSTWLIEYGADPNT
YDGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR001849PH_domain