prot_H-elongata_contig54251.12795.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54251.12795.1
Unique Nameprot_H-elongata_contig54251.12795.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length188
Homology
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.750e-36
Identity = 73/149 (48.99%), Postives = 95/149 (63.76%), Query Frame = 0
Query:    1 MDAIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSVFK 149
            + AI P  L++NL+++G Q+R   +EDAHEFL  LL+ M  C L R   K       S   SR+ ETT INRIFGGYLRSRL C  CG   D ++ F+DLS+ L++ V ++E AL+ FV+ E L   N W C GC+  V+AEK LSVFK
Sbjct:  345 LGAISPKVLVQNLRMIGRQFRQGRQEDAHEFLRHLLDKMVDCYLKRKGVK-------SSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFK 486          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.750e-30
Identity = 60/146 (41.10%), Postives = 90/146 (61.64%), Query Frame = 0
Query:    2 DAIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
             AI P  ++ N++ +G Q+R   +EDAHEFL +L++SMA   L R   K  +         R+ ETT+INR+FGGYLR+++ C  C +  + YE ++DLSL +   ++++E ALK F + E L  SNRW C GC+  V A K L++
Sbjct:   76 SAISPKTIVANIRTIGKQFRPGRQEDAHEFLRKLVDSMAEAILRRHGVKANA-------PHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTI 214          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A7S1U5Y3_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5Y3_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.050e-27
Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 0
Query:    2 DAIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSVFK 149
            +A  P  ++ NL+ +   ++   +EDAHE+L QLL+ +   CL+RS  K  +         R  ET++++R+FGGYLRS+L C  C +  + Y++ LDLSL++   V+++  AL+AF +AE L   NRW C GC  LV A K ++VF+
Sbjct:  117 NAFAPKAIVGNLRRISRNFKLGRQEDAHEYLRQLLDGLHKSCLMRSGLKPTAC-------GRREETSAMHRLFGGYLRSQLKCNDCAYCSNTYDACLDLSLEIHGKVSSLPSALEAFQAAEILDKDNRWKCGGCNKLVRARKQITVFR 257          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: E6ZTX7_SPORE (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Sporisorium reilianum TaxID=72558 RepID=E6ZTX7_SPORE)

HSP 1 Score: 113 bits (282), Expect = 1.190e-25
Identity = 56/142 (39.44%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    6 PNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
            P +  RNLK      R   +EDAHE+L  LLE++   CL R+   L+           I  TT + ++FGG LRSR+TC SCG + D ++ F+DLSL++ K +T++  A +AFV+ ++LTGS ++ CD C+  V+A K  ++
Sbjct:  269 PKEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARASKSLKP-------DDPIRRTTFVQKMFGGKLRSRVTCHSCGHNSDTFDPFMDLSLEVRKGITSLTDAFRAFVAKDHLTGSEKYKCDKCKRKVDATKQFTI 403          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A317XY95_9BASI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XY95_9BASI)

HSP 1 Score: 113 bits (282), Expect = 1.220e-25
Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    6 PNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
            P +  RNLK      R   +EDAHE+L  LLE+M   CL R+   L+           +  TT + +IFGG LRSR+TC SCG++ D ++ F+DLSL + K + T+  A +AFV+ + LTGS ++ CD C+  V+A K  ++
Sbjct:  285 PQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEAMQQSCLARAPKALKP-------DDPVRRTTFVQKIFGGKLRSRVTCHSCGYNSDTFDPFMDLSLDVRKGINTLADAFRAFVAKDKLTGSEKYKCDKCKRKVDATKQFTI 419          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A140KN85_9BASI (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A140KN85_9BASI)

HSP 1 Score: 111 bits (278), Expect = 4.100e-25
Identity = 55/142 (38.73%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    6 PNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
            P +  RNLK      R   +EDAHE+L  LLE++   CL R+   L+       T   I  TT + ++FGG LRSR+TC  CG + D ++ F+DLSL + K ++++  A +AFV+ ++LTGS ++ CD C+  V+A K  ++
Sbjct:  264 PKEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARASKSLK-------TDDPIRRTTFVQKMFGGKLRSRVTCHGCGHNSDTFDPFMDLSLDVRKGISSLTDAFRAFVAKDHLTGSEKYKCDKCKRKVDATKQFTI 398          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A7S3XUI1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUI1_HETAK)

HSP 1 Score: 104 bits (259), Expect = 5.490e-25
Identity = 56/140 (40.00%), Postives = 87/140 (62.14%), Query Frame = 0
Query:    9 LLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSVF 148
            L+ N++ +G Q+R   +EDA EFL  LL++M    L R++ K E+ T P+    RI+ETT+I+RIFGGYLR+++ C  CG+  + +   +DLSL+L     +++ A   F   E L  +NRW CD C+  V A K L+++
Sbjct:    1 LVANVRALGRQFRVGRQEDAQEFLCHLLDAMVKTELRRARVK-ENATGPN--GERISETTAIHRIFGGYLRNQVKCPECGYCSETFNQTMDLSLELTGGTQSLQQAYSHFSRREKLDSANRWRCDECRKQVCATKQLTLY 137          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A0P1AKK5_PLAHL (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKK5_PLAHL)

HSP 1 Score: 110 bits (276), Expect = 7.510e-25
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0
Query:    3 AIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSVFK 149
             ++P +++ N++ V   +R   +ED+HEF   LL+SM   CL R++ K ES    S        TT ++RIFGG L++ L C  CGF  +RY+ FLDLSL++A  V ++ GAL+ F + E L   N W C  C     AEK LS+ K
Sbjct:  198 VLQPKEMVMNIRHVSKTFRIGRQEDSHEFFRLLLDSMQRSCLRRAQIKSESHVAAS--------TTFVHRIFGGKLKNCLKCAKCGFVSERYDDFLDLSLEVASGVNSIIGALRHFTATEKLDDYNAWKCSQCGQRSRAEKGLSIAK 336          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A0K3CG49_RHOTO (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CG49_RHOTO)

HSP 1 Score: 109 bits (273), Expect = 1.720e-24
Identity = 56/142 (39.44%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    6 PNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
            PN ++RNLK +    R   +ED+HEFL   +++M    L     KLE          +I ETT +++IFGG LRSR+ C +CG + D ++S LDLSL L     T++ AL  FV  + L+G N++ C+ C+ LV AEK+ ++
Sbjct:  203 PNPVVRNLKKIAKHMRLGRQEDSHEFLRFSIDAMQAAALYGKSPKLEQ---------KIKETTFVHQIFGGRLRSRVHCLACGHNSDTFDSILDLSLDLGNRANTLKDALDNFVRIDKLSGQNKYKCEKCKKLVNAEKYFAI 335          
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Match: A0A6A3XQJ8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XQJ8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.920e-24
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 0
Query:    3 AIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAKLESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDLSLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSV 147
             ++P +L+ N++ +   +R   +ED+HEF   LL+SM   CL   KA ++S T+ + +      TT ++RIFGG L++ L C  CG+  +R++ FLDLSL++A  V TV+GALK F + E L   N W C  C     AEK L++
Sbjct:  204 VLQPKELVMNVRHISKSFRIGRQEDSHEFFRLLLDSMQRSCL--RKANIKSETHSAAS------TTFVHRIFGGKLKNYLKCAKCGYVSERFDDFLDLSLEIANGVNTVKGALKHFTAIETLDDRNAWKCSSCGKPSRAEKGLTI 340          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54251.12795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJN5_9PHAE1.750e-3648.99USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YLY7_9STRA1.750e-3041.10USP domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S1U5Y3_9STRA1.050e-2739.19Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
E6ZTX7_SPORE1.190e-2539.44Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Spor... [more]
A0A317XY95_9BASI1.220e-2540.14Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Test... [more]
A0A140KN85_9BASI4.100e-2538.73Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Spor... [more]
A0A7S3XUI1_HETAK5.490e-2540.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0P1AKK5_PLAHL7.510e-2540.14Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Plas... [more]
A0A0K3CG49_RHOTO1.720e-2439.44Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Rhod... [more]
A0A6A3XQJ8_9STRA1.920e-2439.31Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028881PAN2 domainPFAMPF13423UCH_1coord: 56..145
e-value: 5.6E-5
score: 22.9
NoneNo IPR availableGENE3D3.90.70.10coord: 1..153
e-value: 5.7E-33
score: 116.3
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 6..147
NoneNo IPR availablePANTHERPTHR24006:SF690UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16coord: 6..147
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..187
score: 15.198
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54251contigH-elongata_contig54251:1076..2154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54251.12795.1mRNA_H-elongata_contig54251.12795.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54251 1027..3249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54251.12795.1 ID=prot_H-elongata_contig54251.12795.1|Name=mRNA_H-elongata_contig54251.12795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
MDAIRPNQLLRNLKLVGPQYRTNIEEDAHEFLHQLLESMAGCCLVRSKAK
LESLTNPSMTKSRITETTSINRIFGGYLRSRLTCKSCGFHRDRYESFLDL
SLQLAKTVTTVEGALKAFVSAEYLTGSNRWHCDGCQTLVEAEKHLSVFKV
CKRGKHTRVKPTVYLSVVAMFKRMSKKHLYDKLYLKH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028881PAN2_dom
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf