prot_H-elongata_contig54242.12794.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54242.12794.1
Unique Nameprot_H-elongata_contig54242.12794.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: D8LP06_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP06_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.530e-16
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS R+ VAILTEKIVYLTKHMQ+HP D+HSRRGLI MVNKRR+
Sbjct:  114 DTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRR 158          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A835ZDP8_9STRA (Tetrapyrrole methylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.210e-16
Identity = 36/44 (81.82%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRR 44
            DSGS+ VQVAI+TE+I+YLTKHMQ HP+DFHSRRGLIA+VNKRR
Sbjct:   97 DSGSAEVQVAIMTERIIYLTKHMQTHPKDFHSRRGLIALVNKRR 140          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A835ZJ48_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ48_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.930e-16
Identity = 34/44 (77.27%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRR 44
            DSGS+ VQVAI+TE+I+YLTKH+Q HP+DFHSRRGLIA+VN RR
Sbjct:  126 DSGSAEVQVAIMTERIIYLTKHLQTHPKDFHSRRGLIALVNNRR 169          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: D1B9J8_THEAS (30S ribosomal protein S15 n=2 Tax=Thermanaerovibrio TaxID=81461 RepID=D1B9J8_THEAS)

HSP 1 Score: 68.2 bits (165), Expect = 6.910e-14
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS  VQVAILT +I  LT+HM+ HP+DFHSRRGL+AMV KRRK
Sbjct:   20 DTGSPEVQVAILTHRIRELTEHMREHPKDFHSRRGLLAMVGKRRK 64          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: RS15_AQUAE (30S ribosomal protein S15 n=2 Tax=Aquifex TaxID=2713 RepID=RS15_AQUAE)

HSP 1 Score: 68.2 bits (165), Expect = 7.270e-14
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS  VQ+AILTE+I  LT+HM++H +D HSRRGLIAMVNKRRK
Sbjct:   21 DTGSPEVQIAILTERINRLTEHMKKHKKDIHSRRGLIAMVNKRRK 65          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A7Z9Z7Z5_9AQUI (30S ribosomal protein S15 n=1 Tax=Aquificales bacterium TaxID=2109902 RepID=A0A7Z9Z7Z5_9AQUI)

HSP 1 Score: 68.2 bits (165), Expect = 8.050e-14
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS  VQ+AILTEKI  LT+HM++H +D HSRRGLIAMVNKRR+
Sbjct:   21 DTGSPEVQIAILTEKINRLTEHMKKHKKDLHSRRGLIAMVNKRRR 65          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A8UXQ9_9AQUI (30S ribosomal protein S15 n=2 Tax=Hydrogenivirga TaxID=246263 RepID=A8UXQ9_9AQUI)

HSP 1 Score: 67.8 bits (164), Expect = 1.030e-13
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS  VQ+AILTE+I  LT+HM++H +D HSRRGLIAMVNKRRK
Sbjct:   21 DTGSPEVQIAILTERINKLTEHMKKHKKDVHSRRGLIAMVNKRRK 65          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A8J9SE91_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SE91_PHATR)

HSP 1 Score: 67.0 bits (162), Expect = 1.830e-13
Identity = 29/45 (64.44%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS   QVA +TE+I YLTKH+Q+HP+DF +RRGL+A+VNKRR+
Sbjct:   18 DTGSPEYQVAGMTERIAYLTKHLQQHPKDFSTRRGLVALVNKRRR 62          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A7C1HNY7_9BACT (30S ribosomal protein S15 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1HNY7_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 2.030e-13
Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            D+GS  VQVA+LTEKI YLT+H+++H +D HSRRGL+ MVNKRR+
Sbjct:   21 DTGSPDVQVALLTEKITYLTEHLKKHVKDVHSRRGLLQMVNKRRR 65          
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Match: A0A1G0RJJ7_9BACT (30S ribosomal protein S15 n=1 Tax=Ignavibacteria bacterium GWF2_33_9 TaxID=1798430 RepID=A0A1G0RJJ7_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 2.810e-13
Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK 45
            DSG   VQ+AILTE+I  LT+H++RHP+DFH+RRG+I +V KRRK
Sbjct:   20 DSGKPEVQIAILTERIADLTRHLERHPKDFHTRRGMIMLVAKRRK 64          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54242.12794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP06_ECTSI1.530e-1680.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDP8_9STRA2.210e-1681.82Tetrapyrrole methylase n=1 Tax=Tribonema minus Tax... [more]
A0A835ZJ48_9STRA5.930e-1677.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D1B9J8_THEAS6.910e-1471.1130S ribosomal protein S15 n=2 Tax=Thermanaerovibri... [more]
RS15_AQUAE7.270e-1471.1130S ribosomal protein S15 n=2 Tax=Aquifex TaxID=27... [more]
A0A7Z9Z7Z5_9AQUI8.050e-1471.1130S ribosomal protein S15 n=1 Tax=Aquificales bact... [more]
A8UXQ9_9AQUI1.030e-1371.1130S ribosomal protein S15 n=2 Tax=Hydrogenivirga T... [more]
A0A8J9SE91_PHATR1.830e-1364.44Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7C1HNY7_9BACT2.030e-1366.6730S ribosomal protein S15 n=1 Tax=bacterium TaxID=... [more]
A0A1G0RJJ7_9BACT2.810e-1364.4430S ribosomal protein S15 n=1 Tax=Ignavibacteria b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 1..45
e-value: 6.0E-6
score: 26.0
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 1..45
e-value: 1.1E-19
score: 70.5
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 1..45
e-value: 4.1E-19
score: 66.7
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 1..45
NoneNo IPR availableGENE3D1.10.287.10coord: 1..45
e-value: 1.0E-17
score: 66.2
NoneNo IPR availablePRODOMPD157043coord: 1..45
e-value: 2.0E-12
score: 169.0
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54242contigH-elongata_contig54242:1726..1863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54242.12794.1mRNA_H-elongata_contig54242.12794.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54242 1726..1863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54242.12794.1 ID=prot_H-elongata_contig54242.12794.1|Name=mRNA_H-elongata_contig54242.12794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
DSGSSRVQVAILTEKIVYLTKHMQRHPQDFHSRRGLIAMVNKRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd