prot_H-elongata_contig54224.12792.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54224.12792.1
Unique Nameprot_H-elongata_contig54224.12792.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: D8LAT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 5.230e-86
Identity = 146/179 (81.56%), Postives = 159/179 (88.83%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPE--------LPSVPTGAPSRVPVAVEEDEDARALRELEASMAM 171
            +FALKRKKM+EGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGA+AM+DARGRLDVDQVDDVMDDIK+EMD AEQIG+AIARPA+DLFDDDALLEEL+MLEEA+LEEQLLAPPAVPT RP+ P+  EQ +V E        LPSVP+  P   PVAVEEDEDARALRELEASMAM
Sbjct:   61 LFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPEGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 239          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A6H5KZ84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ84_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 5.730e-62
Identity = 112/144 (77.78%), Postives = 123/144 (85.42%), Query Frame = 0
Query:   36 MNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPE--------LPSVPTGAPSRVPVAVEEDEDARALRELEASMAM 171
            MNMQTFNAMRSGA+AM+ ARGRLDVDQVDDVMDDIK+EMD AEQIG+AIARPA+DLFDDDALLEEL+MLEEA+LEEQLLAPPAVPT RP+ P+  EQ +V E        LPSVP+  P   PVAVEEDEDARALRELEASMAM
Sbjct:    1 MNMQTFNAMRSGAKAMEGARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAAPQGVEQPAVAESKVPQGYELPSVPSTTPVSAPVAVEEDEDARALRELEASMAM 144          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A836CAA0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.610e-57
Identity = 121/187 (64.71%), Postives = 136/187 (72.73%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSR-----------PESAEQ-------TSVPELPSVPTGAPSRVPVAVEEDEDARALRELEASM 169
            +FALKRKKM+E E+NK+NGAR+TLE Q IALEGSN N+QTF AM SG +AM+ ARG+LDVD VD VMDDI+EEMD A+QIGEAIARPAE LFDDD LL EL  +EEAE+EE LLA PAVP   PS            P  A Q       +S  +LPSVPTG   RVP A EEDED RALRELEASM
Sbjct:   62 LFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGD-VRVPAA-EEDEDLRALRELEASM 246          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A482SS87_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH)

HSP 1 Score: 148 bits (374), Expect = 1.060e-41
Identity = 91/172 (52.91%), Postives = 121/172 (70.35%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVP---VAVEEDEDARALRELEASM 169
            +FALKRKK++E EV KL GAR+T+E+QI++LE +++N++TF AM++GA AMK  RG +D D+VDDVMD + EE D  + I EAI+RP +DLF+D+ LL+EL  L+  E+E  +       T  P+ P +    SV   P+VPT A S VP   VA EEDED RALRELEASM
Sbjct:   64 LFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFNDEELLDELAELDALEMEASVAN-----TVAPAAPVAPPPQSVFNFPAVPTKAVSPVPSKPVAHEEDEDERALRELEASM 230          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A7S3XYN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK)

HSP 1 Score: 148 bits (373), Expect = 1.670e-41
Identity = 87/174 (50.00%), Postives = 120/174 (68.97%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVP--ELPSVPTGAPSRVPVAVEED-EDARALRELEASMAM 171
            MF LKRKKM+E E++KLNGA++ LE QI ALEG+++N + F A R+   A+K ARG +D D V++ +DDI EEM+ A +IGEAI+RPA++LF+D+ LL+EL  LEE  +EE LLA PA P   P     AE+   P  +LP+ PTGA +   +  + D +D  ALR LEA +A+
Sbjct:   63 MFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFEDEELLDELRELEELGVEEDLLAAPAAPVRAPPAAAVAEEAKQPAYDLPAAPTGAVAASAIQGDVDADDLDALRALEAELAV 236          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A7S2RAI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAI7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.600e-41
Identity = 90/171 (52.63%), Postives = 112/171 (65.50%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAED-LFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVPVAVEEDEDARALRELEASMA 170
            ++ +KRKKMFEGEV+K+ GARMTLE Q +ALE S   M+TF AMR G Q M+  R  +D D V + MDDI++E++ A  I  AI  P  D L D++ALL ELN +E+ ELE+ LL  PAVP   P+         + ELP+VPTGA S     VEEDED  ALRELEA MA
Sbjct:   92 LYCMKRKKMFEGEVDKIRGARMTLEQQALALESSATTMETFKAMREGNQTMRALRANVDADTVGETMDDIRDEIEEANDISAAIGEPLNDGLEDEEALLAELNEMEQLELEQTLLGTPAVPAAAPA---------LGELPAVPTGAISMPAAGVEEDEDLAALRELEADMA 253          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A7S2B2J5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2J5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.720e-40
Identity = 92/171 (53.80%), Postives = 120/171 (70.18%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAED-LFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVPVAVE-EDEDARALRELEASM 169
            +  +KRKKMFE E+ K+ GARMTLE Q++ALE + MNMQTF AM  G QA+K ARG +D D + D MDDI+EEMD A+ I  A+  P +D L DDD LL ELNM+E+ +LE++LL PP+VPT+ P    +AE   + +LP  PT   S+V V  + ED++  ALRELEASM
Sbjct:  112 LICMKRKKMFENEITKIQGARMTLEQQMMALENAAMNMQTFGAMNEGKQALKAARGGMDADTIGDTMDDIREEMDEADAIATALGAPLDDALEDDDELLAELNMMEQDDLEDKLLNPPSVPTSTPVG--AAED--ILDLPDAPT---SQVVVDGDVEDDELAALRELEASM 275          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A7S3NK50_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.150e-39
Identity = 87/172 (50.58%), Postives = 113/172 (65.70%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVPVAV-EEDEDARALRELEASMAM 171
            ++ LKRKKM+EGE+ K+NGAR+TLE Q+IA+EG+  N +T  AM +G  AM  AR  + VD V ++MDDI +E++ A  I EAI+ PA  + DD+ LL ELN LEE ELE QLL  PAVP T              +LP VPT  P  +PV   +ED D +ALRELEA+MA+
Sbjct:   66 LYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDDEDLLNELNELEELELESQLLDAPAVPAT------------AIDLPDVPTATPE-IPVQQNQEDADTKALRELEAAMAL 224          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: W7TW70_9STRA (Charged multivesicular body protein 4b n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW70_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.350e-38
Identity = 92/176 (52.27%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAED-LFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVP--VAVE--EDEDARALRELEASMAM 171
            +FALK+KKM+E EV K+ GA M LESQ ++LEGS  NM+ F AMR+GA+AM   RG +DVD+VDD++DDI+EEMDTA  I EAI+ P +  L DDD LL EL+ + E E E +L   PA    +P   E+A +   PELP+VPT  P   P   A+E  ++E+ RAL+ELE SMA+
Sbjct:   61 LFALKKKKMYEAEVIKIQGAMMNLESQAMSLEGSATNMEVFGAMRTGAKAMGAMRGAMDVDKVDDLVDDIREEMDTATHISEAISTPLDGGLQDDDDLLAELDAMVEEETEAKLTQVPASLPVKPGMAETAPE-PFPELPAVPTNKPVASPGLEALEGVDEEELRALKELEQSMAV 235          
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Match: A0A418AQT0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A418AQT0_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.480e-37
Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 0
Query:    1 MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQAMKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAED-LFDDDALLEELNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPE-------LPSVPTGAPSRVPVAVEEDEDA-RALRELEASMAM 171
            +F LKRKKM+E E+ KL GARMTLE+Q++ LE + +NM TF A+RSGA  MK   G+++VD VDD+MDDI+EEM TA++IG AI++P  + L+D+D L ++L  L++  +EEQL  P  V     +RP+ A+     +       LP VPT A S+V V  + D D    LR LEASMAM
Sbjct:   87 IFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMATFTALRSGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDEDELEQQLRELDDLAMEEQLATPSPVAAPVQARPQPAQAAPAQQPAQAMFNLPEVPTHAVSQVKVTGKADADELEELRRLEASMAM 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54224.12792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAT7_ECTSI5.230e-8681.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ84_9PHAE5.730e-6277.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAA0_9STRA1.610e-5764.71Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A482SS87_9ARCH1.060e-4152.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3XYN0_HETAK1.670e-4150.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RAI7_9STRA5.600e-4152.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B2J5_9STRA5.720e-4053.80Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3NK50_9STRA6.150e-3950.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TW70_9STRA2.350e-3852.27Charged multivesicular body protein 4b n=3 Tax=Mon... [more]
A0A418AQT0_9STRA1.480e-3748.33Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 162..171
NoneNo IPR availableGENE3D1.10.287.1060coord: 1..32
e-value: 2.0E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR22761:SF10BCDNA.GH08385-RELATEDcoord: 3..170
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 3..170
IPR005024Snf7 familyPFAMPF03357Snf7coord: 1..143
e-value: 7.2E-32
score: 110.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54224contigH-elongata_contig54224:676..1934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54224.12792.1mRNA_H-elongata_contig54224.12792.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54224 230..2102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54224.12792.1 ID=prot_H-elongata_contig54224.12792.1|Name=mRNA_H-elongata_contig54224.12792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
MFALKRKKMFEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAQA
MKDARGRLDVDQVDDVMDDIKEEMDTAEQIGEAIARPAEDLFDDDALLEE
LNMLEEAELEEQLLAPPAVPTTRPSRPESAEQTSVPELPSVPTGAPSRVP
VAVEEDEDARALRELEASMAM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam