prot_H-elongata_contig5418.12789.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5418.12789.1
Unique Nameprot_H-elongata_contig5418.12789.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1209
Homology
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 763 bits (1971), Expect = 1.030e-250
Identity = 537/1135 (47.31%), Postives = 643/1135 (56.65%), Query Frame = 0
Query:   60 EVRVDLDGEVVKTAVATTV-------ERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDMIQGLSWLDYQAPPSEVRPLCTPEEEAVLPGI-DNTSDAENLSDDGIPGGGEGTRSAVELARMCHEDPCRGMLEASMRYWKGRMALLPRLCSMVKTYA---AVDLVEV--DVGGTRHMAGTLH---------------PRDALSCLRILRAVAARASWAAARVARESGLLEGVREAFLEPRVDGSLPFDLSE-GPSTSLSTDGDRA---PSVTDMASTRRSE---------DAS-------PERIAVMAVKLTRSLMQSGRDVALYLSATPLLGSTKGLLALGQGLRRPRQGLLLVQREVLELWRCCLSYGIDVSSADTVVLVSRGQGWWPGLD---------------------------THPDVVPPGAGTPPTVETLGSTYNEALCSRNLAAKTKGVVGDGGGDAKGEINATDRSRCGGTALGFDCERLRRRDGXXXXXAIITPRLSFLRAMHQLACACVISPRDKSAKTDSGANVDAEHSRGPAGGRDEEGKTNKRDLVPYILGGISVDPETWANVGDTVDASVEASLRHLLSGDRI--RVKSERVA-VAADSAAIHLVACWLERYRVMSRMARASARGIQRLETTAEDAALLFSLLLDSSCLPAAVEIATRSCLAKTMAARAEESSSGDVADGETDGDWAGEVGVA---AAAVAALDWLSGVFRLGLACERWAPGEAEAALAACSDSTASALANLLAASPPQYIYGGARSRRGR---GAINRPGDGTEGVVAWRRSLRRASATARWLGCRLLAFVKEANGGEETTTLVEGDQGRPSWEALRRDCALNAVALCEPGDEAVAVGLIAEGLR----DHPL--GGRRTNENIISAASCTTAPA--LLRKLFRGAVSDPAAFAHASFHLDGRWSSLQSLEASA--GTASLLPLPRHWLFLPLASQA-QRAASVAVSACLSVLVQLEREGSVYVRRAAGVEGAASASTNHPAVVVADWGGEG-VAPEVKLYHLMNASMYGAAVFSDGGDRAEADFEWLLGSRY 1098
            E RVDLDG V                E  EALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVL  RAA I RG  PPH RLP MLP+AIR+CLDD NP V  AAL A EA LAPLAR  E+ E  +QGLSW+DYQA P E RPLCTPEE+  LP + D+  + E     G  G GEG ++  ELAR+C+EDPCRG+LE         MALLP++ S++K+YA   A D  +   D GG     G+ H               PR ALSCLR+L AVA RA WAA RVA E GLL+ VREAFLEPR DG+LP DLSE  P+T  +T   +    P   + A++ R+E         DA+        E++A++AV+L R L+QSGR VAL LS TPLLGSTKG LALGQG RRP   L  VQREVLELWRCCLSYG+DV++ADTVVLV+RGQGWWPGL                                    G G  PT                        VG     +   +  +     GG + G D                + PRL+F RA+HQLACACV+ P   +A  +     +     G AG     G   +++   + +GG++V PE+WA+VGDTVDA+VE +L  LLSG R   RV     A  A  +AA+HLVACW+ERY+ MSR      RG + LE+TAEDAA+LFS LL S  LP    +A  + + +    R ++            GD   + GV+   AAA A LDWLSGVFRLGLACER  PGEA AALA+  ++TA                             A+  P         + R +RRA A ARWLGCRLLA      GG        G +G   W ALRRDCAL A+ALCE GDEA+AVGL+AE L     D P   G  R +++  +AA  T A +  LLR LFRGA+SDP A + +SFHLDGRW+SLQSL+A    GTASLLPLP HWLFLPLASQ  ++AAS AVSACLS+LVQLERE S YV    G                   GG G V+PEVKLYHL NA +YGA+V S  G      F+WL  SRY
Sbjct:  385 EARVDLDGAVXXXXXXXXXXXXXXGGEGLEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLRFRAACIARGQTPPHRRLPEMLPVAIRLCLDDGNPSVTSAALNATEALLAPLARDGEDEERAMQGLSWVDYQAFPCEPRPLCTPEEKQHLPPLKDSAIEEEGDETPGDGGEGEGGKTVRELARLCYEDPCRGLLE---------MALLPKIASVIKSYADQVAADGAQAASDGGGGLGDKGSFHGAARATAAATAVSFRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRADGTLPLDLSETAPATVTATAIPKQLSPPPPQEPATSARAEGKARTEGPRDANGCPPXXXQEQLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGVDVAAADTVVLVARGQGWWPGLSGGVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEEPTAXXXXXXXXXXXXXXXXXXXXXXXVG---AQSSSGVAQSTSGGAGGGSRGGDS---------------LPPRLAFYRALHQLACACVLPPGVSAAGRNKNDGAETAGGDGKAGAG-AAGTGVRKEAEGFSVGGVAVVPESWADVGDTVDAAVEGALLWLLSGVRGGGRVGGXXAAETAQQAAAVHLVACWVERYQAMSRTI--GRRGSRHLESTAEDAAVLFSSLLASPALPLPAAVAATTAVTR----RGDQXXXXXXXXXXXSGDGFSQRGVSSGEAAAAAGLDWLSGVFRLGLACERAVPGEAAAALASAPEATAXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAVAPP------PATFLRRVRRAEAGARWLGCRLLALG--CRGG--------GREGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPEEEGSERPSDDPAAAAVGTAAASTSLLRMLFRGAISDPVALSQSSFHLDGRWASLQSLKACTPPGTASLLPLPPHWLFLPLASQGGEKAASTAVSACLSLLVQLEREESAYVWSGGGX------------------GGTGCVSPEVKLYHLANACLYGASVLSGLG--VVQHFDWLF-SRY 1448          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 684 bits (1764), Expect = 5.180e-220
Identity = 524/1151 (45.53%), Postives = 626/1151 (54.39%), Query Frame = 0
Query:  196 QAPPSEVRPLCTPEEEAVLPGI-DNTSDAENLSDDGIPGGGEGTRSAVELARMCHEDPCRGMLEAS----------------------------MRYWKGR--------------------------MALLPRLCSMVKTYA---AVDLVEV--DVGGTRHMAGTLH---------------PRDALSCLRILRAVAARASWAAARVARESGLLEGVREAFLEPRVDGSLPFDLSEGPSTSLSTDGDRAPSVTDMASTRRSE---------DAS--------PERIAVMAVKLTRSLMQSGRDVALYLSATPLLGSTKGLLALGQGLRRPRQGLLLVQREVLELWRCCLSYGIDVSSADTVVLVSRGQGWWPGLDTHPDVVPPGAGTPPTVETLGSTYNEALCSRNLAAKTKGVV-GDGGGDAKGEIN------------ATDRSRCGGTALGFDCERLRRRDGXXXXXAIITPRLSFLRAMHQLACACVISPRDKSAKTDSGANVDAEHSRGPAGGRDEEGKTNKRDLVPYILGGISVDPETWANVGDTVDASVEASLRHLLSGDRIRVKSE---RVAVAADSAAIHLVACWLERYRVMSRMARASARGIQRLETTAEDAALLFSLLLDSSCLPAAVEIA---TRSC----------LAKTMAARAEESSSGDVADGETDGDWAGEVGVAAAAVAALDWLSGVFRLGLACERWAPGEAEAALAACSDSTASALANLLAASPPQYIYGGARSRRGRGAINRPGDGTEGVVA-WRRSLRRASATARWLGCRLLAFVKEANGGEETTTLVEGDQGRPSWEALRRDCALNAVALCEPGDEAVAVGLIAEGLR----DHPL--GGRRTNENIISAASCTTAPA-LLRKLFRGAVSDPAAFAHASFHLDGRWSSLQSLEASA--GTASLLPLPRHWLFLPLASQAQ-RAASVAVSACLSVLVQLEREGSVYVRRAAGVEGAASASTNHPAVVVADWGGEGVAPEVKLYHLMNASMYGAAVFSDGGDRAEADFEWLLGSRYLDQCGRGFEARLVNVVAQLSIPSAPDPAKIIADAAA-----DAXXXXXXXXXXXGERGSTGREQARAARAQSHAERALLEFVKDLVGSFLADSFGLSSFARVLRVFVRTGFPVAAR 1209
            QA P E RPLCTPEE+  LP + DN  + E     G  G GEG ++  ELAR+C+EDPCRG+LE +                            M   +G                           MALLP++ S++K+ A   + D  +   D GG     G++H               PR ALSCLR+L AVA RA WAA RVA E GLL+ VREAFLEPR DG+LP DLSE    + +     AP   + A+  R+E         DA+         E +A++AV+L R L+QSGR VAL LS TPLLGSTKG LALGQG RRP   L  VQREVLELWRCCLSYGIDV++ADTVVLV+RGQGWWPGL               +V  +G           L A T  V  GDGG                       +S   G  +G          G       + PRL+F RA+HQLACACV+ P   +A  +     +     G AG     G   +++   + +GG+ V PE+WA+VGDTVDA+VEA L  LL   R     +       A  +AA+HLVACW+ERY+ MSR A   A G   LE+ AEDAA+LFS LL SS LP    +A   TR C                      S   V+ GE             A  A LDWL GVFRLGLACER  PGEA AALA+  ++TA+AL   LA + P      A +    GA+  P        A + R +RRA A ARWLGCRLLA V              G  G   W ALRRDCAL A+ALCE GDEA+AVGL+AE L     D P   G  R +++  +        A LLR LFRGA+SDP A + +SFHLDGRW+SLQSL+A A  GTASLLPLP HWLFLPL SQ   +AAS+AVSACLS+LV+LERE S YV              N P              EVKLYHL NA +YGA+V S  G  A  +F+WL  SRYL+QCG GFE RL  V+A+L++ SAPDPAK+IADAA        XXXXXXXXXXX       R++ARAAR QSHAERALLEFVKDLV SFLADSFGL SFARVLRVFVRTGFPVAAR
Sbjct:   17 QAFPCEPRPLCTPEEKQHLPPLKDNAIEEEGDETPGDGGEGEGGKTVRELARLCYEDPCRGLLEVTGCARQGDQGGGPQTVYGLPHRLQCLEVVMHVHEGASGAARRGDPSSNFSLSVGQSGPKKRVMALLPKIASVIKSCAGQVSADGAQAGSDGGGGLGDMGSVHGAARATAEAAAVSLRPRAALSCLRVLCAVAGRAPWAAERVASEPGLLDAVREAFLEPRTDGTLPLDLSEAAPATTTKQLSPAPPQ-EPATPARAEGKARGGGPGDANGCPXXXXXQEGLALLAVRLARVLVQSGRGVALALSQTPLLGSTKGWLALGQGSRRPLPALEAVQREVLELWRCCLSYGIDVAAADTVVLVARGQGWWPGL---------------SVGGVGXXXXXXXXXAPLVADTVTVERGDGGXXXXXXXXXXXXXXXTAATPVAAKSLPVGVGVGGARSTSGGASGGSRGGDSVPPRLAFYRALHQLACACVLPPGGNAAGRNKNDGAETAGGDGKAG-VGAAGAGLRKEAEGFSVGGVVVVPESWADVGDTVDAAVEAVLLWLLRSVRGGGGVDGGGTAETAQQAAAVHLVACWMERYQAMSRTAGRRASG--HLESIAEDAAVLFSSLLASSALPLMAAVAAAVTRGCDQSGGGXXXXXXXXXXXXXXSFSQRGVSSGE-------------AVTAGLDWLCGVFRLGLACERAMPGEAAAALASAPEATAAALXXFLATAGPT-----AGAVXXGGALTTPTAAVAPPPATFLRRVRRAEAGARWLGCRLLALVSRG----------VGRGGGWPWAALRRDCALQAMALCERGDEAIAVGLLAEALPGSTVDSPAENGSERPSDDPAAXXXXXXXSASLLRTLFRGAISDPVALSQSSFHLDGRWASLQSLKACAPPGTASLLPLPPHWLFLPLVSQGGGKAASMAVSACLSLLVELEREESTYVWGXXXXXXXXXTGCNPP--------------EVKLYHLANACLYGASVLSGLG--AVQNFDWLF-SRYLEQCGAGFEGRLAEVIARLALASAPDPAKMIADAATAXXXXXXXXXXXXXXXXXXXXXXXARDRARAARRQSHAERALLEFVKDLVASFLADSFGLPSFARVLRVFVRTGFPVAAR 1103          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A6H5JHK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK5_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.510e-52
Identity = 128/222 (57.66%), Postives = 140/222 (63.06%), Query Frame = 0
Query:    1 TGGPTKAQRAATAAGGVDSEEALEAALRLLPPEERSKSAWTQS---DGTATQTEDF---------------GGGERREVRVDLDGEVVKTA-------VATTVERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDMIQGLSWLDYQA 197
            +G PT AQR      G+DS+EALEAAL  LPPEER KS WT +   D   T  E                 G G+  E RVDL+G VV  A                 LHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAG+L  RAA I RG  PPH RLP MLP+AIR+CLDD NP V  AAL A EA LAPLAR  E+ E  +QGLSW+DYQA
Sbjct:  420 SGAPTGAQRXXXXXXGIDSKEALEAALLTLPPEEREKSRWTLTAGGDAAVTAAEXXXXXXXXXXXXXXXXXGAGD--EARVDLNGAVVVLAGXXXXXXXXXXXXXXXXLHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGLLKVRAACIARGQTPPHRRLPEMLPVAIRLCLDDGNPSVTSAALIATEALLAPLARDGEDEESAMQGLSWVDYQA 639          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A835YNX8_9STRA (RPAP1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 9.350e-32
Identity = 133/397 (33.50%), Postives = 182/397 (45.84%), Query Frame = 0
Query:   87 HGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDMIQGLSWLDYQAPPSEVRPLCTPEEEAVLPGIDNTSDAENLSDDGIPGGGEGTRSAVELARMCHEDPCRGMLEASMRYWKGRMALLPRLCSMVKTYAAVDLVEVD--VGGTRHMAGTLH--PRDALSCLRILRAVAARASWAAARVARESGLLEGVREAFLEPRVDGSLPFDLS------EGPSTSLSTDGDRAPSVTDMASTRRSEDASPERIAVMAVKLTRSLMQSGRDVA---LYLSATPLLGSTKGLLALGQGLRRPRQGLLLV-QREVLELWRCCLSYGIDVSSADTVVLVSR 469
            HGD       TP ELV LARS V  QR+ ALRALAG+L  R A I  G  PPH RLP MLP A+R+CLD  + K   AAL A++A+L  LA                         RP CT EE+  +  +D   +          G  +G  S  + AR  + +P RG+L          M LLPRL ++ + +A          +      A      P  A+ CLR+L AVA  ++  A R+  E GLL+ VREAF+EP   G+ P  LS       G ST    D +R+P                   AV A++L R++    R  A   LY     +L + + LLALG         +L   Q E L +W  CL YG+ + +A+TV+ +++
Sbjct:  196 HGDPHH---LTPDELVALARSDVPAQRRAALRALAGLLRARRAAIAAGAPPPHARLPEMLPAALRLCLDGESWKEVAAALGALDAYL--LAPEDAAAWAAAPWCGXXXXXXXXXXRRPQCTVEEQRGMDALDGGEEE---------GEEQGELSLQQAARAAYLEPVRGLLA---------MNLLPRLRAITREWADASDASAPWVIAAAADAAADCRSAPPGAVECLRVLVAVARSSAANAERIIAEPGLLDAVREAFVEPDTAGAPPVPLSCGSSGGGGGSTGSGNDVERSP-------------------AVWALRLARAVCHGSRLAARHVLYGGRGGILDAAQALLALGGXXXXXXXXVLAAAQCEALAVWHACLRYGLALEAAETVLPLAQ 550          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: K3X1P0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1P0_GLOUD)

HSP 1 Score: 108 bits (270), Expect = 4.990e-20
Identity = 136/475 (28.63%), Postives = 201/475 (42.32%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAWTQS--DGTA--------TQTEDFGGGERREV------RVDLDGEVVKTAVATTVERK--EALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPP-HPR-LPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDM--IQGLSWLDYQAPPS-----EVRPLCTPEEEAVL----PGIDNTS--DAENLSDDGIPGGGEGTR-SAVELARMCHEDPCRGMLEASMRYWKGRMALLPRLCSMVKTYAAVDLVEVDVGGTRHMAGTLHPRDALSCLRILRAVAARASWAAARVARESGLLEGVREAFLEPRVDGSLPFDLSEGPSTSLSTDGDRAPSVTDMASTRRSEDASPERIAVMAVKLTRSLMQSGRDVALYLSATPLLGSTKGLLALGQGLRRPRQGLLLVQREVLELWRCCLSYGID 457
            + SEE L    +LLPPEER+K  W Q+  D +A        T+ +      R+E       R D +G+ + +     V+      L HHGDDPD AGYT SEL+ LARSTVS QR +AL  +  +L  R  + +  N     PR LP  LPI +R+ LDD N     AA+ A+ AFL P A  +++  +    +G   +   APP       ++   TP  + VL    P  +     D  ++ DD      EG   S++    +   DP +G L          M +  RL  +++     D                 P      L IL  +A  +  AA  +     L++ +++  +E     +L              D D           +   DA+  R+ V A+ L R+L Q  R VA +L    ++ STKG LA+      P      +Q E L +WR  L YG+D
Sbjct:  267 IKSEEQLFETAKLLPPEERAKHEWMQAVPDASASAAPSSATTKGDATKANARKEKLTATTERFDFNGDRIVSGGDGGVQHATHSGLFHHGDDPDAAGYTMSELIHLARSTVSSQRAMALTTITKILQKRIVYQQEQNLTNVFPRVLPTNLPITLRIALDDQNYTALSAAIAALHAFLVPPAELQQQNNEASAFEGAYGV-VVAPPHIHLHRNIKEETTPASQEVLRLEIPPTEEVIYIDTSDVQDD------EGNDVSSISDEDLTFLDPVQGFLN---------MDIGTRLRYILERIQLPD-----------------PTSTEKMLDILTQIANHSPKAAKDIGTNLKLMKALQQQCIENEAVLTL-------------QDADE----------KEKNDAAL-RVTVKALALVRALCQGSRAVAAFLIGNGVIQSTKGFLAIQSSFTSPL--FHDIQCESLRIWRVLLKYGLD 682          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A813BUX8_9DINO (Rpap1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BUX8_9DINO)

HSP 1 Score: 90.5 bits (223), Expect = 2.100e-15
Identity = 71/191 (37.17%), Postives = 89/191 (46.60%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAWT-----QSDGTATQTEDFG-----------GGERR-------EVRVDLDGEVVKTAVATTVERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPH------------PRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAF 172
            + +EE L  A + LP  ER+K AWT       D     T   G            G R         VR DL G + +          + LHHHGD P++AGYT  ELV LARSTV GQR LAL A+ G+L  R A I R  APP             P +P +LP+ +R  LDD +     A + A+EAF
Sbjct:  164 ITTEEELLQAAQDLPLAERAKLAWTGMVPVDGDAAPATTTSVGTQAVGLLAEEAAGAREPAWRGQEHVRYDLQGALARQDAPYD----QTLHHHGDAPEEAGYTLRELVGLARSTVGGQRTLALTAITGILQRRRAAIVRTYAPPGAAAPGPPADISPPLIPKVLPVILRCALDDGHAAARAAGIAALEAF 350          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: T0PPP8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PPP8_SAPDV)

HSP 1 Score: 78.2 bits (191), Expect = 9.060e-11
Identity = 58/158 (36.71%), Postives = 76/158 (48.10%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAWTQSDGTATQTEDFGGGERREVRVDLDGEVVKTAVATTVERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVN-RAAHIRRGNAPPHPRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFL 173
            V ++  L +A++ LP EER+K  W  S    T +          VRVD DG V+             L+HHGDDPD+ GYT  ELV LARSTV+ QR +A   L  VL     + I  G           + +A+R  LDD N  V  A + A+ A L
Sbjct:  182 VSNDAELASAVQGLPDEERAKHEWMTSLPPTTSSSSTA------VRVDFDGHVLPATDGLLPPSHSGLYHHGDDPDRPGYTIEELVLLARSTVASQRVVACTVLGKVLRQPEDSAIAVGP----------IALALRHALDDANQSVLTAGIDALHAAL 323          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A2R5GBM8_9STRA (RNA polymerase II-associated protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBM8_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.700e-10
Identity = 64/205 (31.22%), Postives = 87/205 (42.44%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAWT------------------QSDGTATQTEDFGGGER-----------REVRVDLDGEVVKTAVATTVE---RKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPP------------HP--RLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAP 175
            + +EE L+ A+ +LP  ER K  WT                  +S+  AT+     GG                R DL+G  +  +     +      AL+HHGD+P++AGYT  EL  LARS  + Q+ LAL  +A +L  R   +     P             HP   LP  L +  RM LD  N  V  AA+ A EAFL P
Sbjct:  291 IRTEEQLDEAVNMLPVREREKLRWTGRIKGPAPTFGPANVDEEESEDLATRAGMQPGGAESLMSADFRTSIESARFDLEGNFIPPSTDEEAQLSGHHSALYHHGDEPERAGYTIIELTHLARSKAAAQKTLALSCIAKILRKRHVSLYGEGTPEEAERRSILVNGSHPLFSLPDQLGVVARMGLDSSNASVVTAAIEATEAFLVP 495          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A067BL42_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BL42_SAPPC)

HSP 1 Score: 73.2 bits (178), Expect = 1.380e-9
Identity = 56/159 (35.22%), Postives = 74/159 (46.54%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAWTQSDGTATQTEDFGGGERREVRVDLDGEVVKTAVATTVERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAI--RMCLDDVNPKVAFAALRAMEAFL 173
            + ++  L +A++ LP EER+K  W  S                 VRVD +G V+             L+HHGDDPD+ GYT  EL+ LARSTV+ QR +A   L  VL            P   R   + PIA+  R  LDD N  V  A + A+ A L
Sbjct:  183 ISNDAELASAVQSLPDEERAKHEWMTS--LPPTXXXXXXXXXTAVRVDFNGLVLPATDELLPPSHSGLYHHGDDPDRPGYTIEELLLLARSTVASQRVVACSVLGKVL----------QQPSEDRAVAVGPIALALRHALDDANQSVLTAGINALHAAL 329          
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Match: A0A1V9YHQ2_9STRA (RNA polymerase II-associated protein 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHQ2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.970e-9
Identity = 72/272 (26.47%), Postives = 113/272 (41.54%), Query Frame = 0
Query:   17 VDSEEALEAALRLLPPEERSKSAW-TQSDGTATQTEDFGGGERREVRVDLDG-EVVKTAVATTVERKEALHHHGDDPDKAGYTPSELVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAIRMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDMIQGLSWLDYQAPPSEVRPLCTPEEEAVLPGIDNTSDAENLSDDGIPGGGEGTRSAVELARMCHEDPCRGMLEASMRYWKGRMALLPRLCSMVKTYAAVDL 286
            + ++  L +A++ LP EER+K  W T     AT +         EVR D +G E+  T           L+HHGDDPD+ GYT  EL+ LARSTV+ QR +A   L  VL  R   +  G           + + +R  LD+ N  V  A + A+ A L         V   + G+        P+ V    TP +    P +    +   ++D       E   + +EL  +   D  + +L   + +    +  LP L +       +D+
Sbjct:  186 ISNDAELASAVQALPDEERAKHEWMTAVPAPATPS--------AEVRFDFNGVELPTTPTDVLPPSHSGLYHHGDDPDRPGYTVDELLLLARSTVASQRVMACTVLGKVL-RRPTALSVGP----------IALVLRHALDEANQSVLTAGIDALHAAL---------VRFDVLGIQ-------PTGV--ALTPVDRLGRPNVVRYPEPAEVND-------EAEEAPIELKELAQLDAIQALLRTHLPFRLRHLLALPSLANTTSLDQVIDM 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5418.12789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHI7_ECTSI1.030e-25047.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML9_9PHAE5.180e-22045.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHK5_9PHAE1.510e-5257.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNX8_9STRA9.350e-3233.50RPAP1_C domain-containing protein n=1 Tax=Tribonem... [more]
K3X1P0_GLOUD4.990e-2028.63Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A813BUX8_9DINO2.100e-1537.17Rpap1 protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
T0PPP8_SAPDV9.060e-1136.71Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A2R5GBM8_9STRA1.700e-1031.22RNA polymerase II-associated protein 1 n=1 Tax=Hon... [more]
A0A067BL42_SAPPC1.380e-935.22Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9YHQ2_9STRA6.970e-926.47RNA polymerase II-associated protein 1 n=1 Tax=Ach... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013929RNA polymerase II-associated protein 1, C-terminalPFAMPF08620RPAP1_Ccoord: 60..125
e-value: 2.6E-20
score: 72.3
IPR039913RNA polymerase II-associated protein RPAP1/Rba50PANTHERPTHR21483FAMILY NOT NAMEDcoord: 31..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5418contigH-elongata_contig5418:31..11371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5418.12789.1mRNA_H-elongata_contig5418.12789.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5418 31..11371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5418.12789.1 ID=prot_H-elongata_contig5418.12789.1|Name=mRNA_H-elongata_contig5418.12789.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1209bp
TGGPTKAQRAATAAGGVDSEEALEAALRLLPPEERSKSAWTQSDGTATQT
EDFGGGERREVRVDLDGEVVKTAVATTVERKEALHHHGDDPDKAGYTPSE
LVRLARSTVSGQRQLALRALAGVLVNRAAHIRRGNAPPHPRLPPMLPIAI
RMCLDDVNPKVAFAALRAMEAFLAPLARRREEVEDMIQGLSWLDYQAPPS
EVRPLCTPEEEAVLPGIDNTSDAENLSDDGIPGGGEGTRSAVELARMCHE
DPCRGMLEASMRYWKGRMALLPRLCSMVKTYAAVDLVEVDVGGTRHMAGT
LHPRDALSCLRILRAVAARASWAAARVARESGLLEGVREAFLEPRVDGSL
PFDLSEGPSTSLSTDGDRAPSVTDMASTRRSEDASPERIAVMAVKLTRSL
MQSGRDVALYLSATPLLGSTKGLLALGQGLRRPRQGLLLVQREVLELWRC
CLSYGIDVSSADTVVLVSRGQGWWPGLDTHPDVVPPGAGTPPTVETLGST
YNEALCSRNLAAKTKGVVGDGGGDAKGEINATDRSRCGGTALGFDCERLR
RRDGGGGAAAIITPRLSFLRAMHQLACACVISPRDKSAKTDSGANVDAEH
SRGPAGGRDEEGKTNKRDLVPYILGGISVDPETWANVGDTVDASVEASLR
HLLSGDRIRVKSERVAVAADSAAIHLVACWLERYRVMSRMARASARGIQR
LETTAEDAALLFSLLLDSSCLPAAVEIATRSCLAKTMAARAEESSSGDVA
DGETDGDWAGEVGVAAAAVAALDWLSGVFRLGLACERWAPGEAEAALAAC
SDSTASALANLLAASPPQYIYGGARSRRGRGAINRPGDGTEGVVAWRRSL
RRASATARWLGCRLLAFVKEANGGEETTTLVEGDQGRPSWEALRRDCALN
AVALCEPGDEAVAVGLIAEGLRDHPLGGRRTNENIISAASCTTAPALLRK
LFRGAVSDPAAFAHASFHLDGRWSSLQSLEASAGTASLLPLPRHWLFLPL
ASQAQRAASVAVSACLSVLVQLEREGSVYVRRAAGVEGAASASTNHPAVV
VADWGGEGVAPEVKLYHLMNASMYGAAVFSDGGDRAEADFEWLLGSRYLD
QCGRGFEARLVNVVAQLSIPSAPDPAKIIADAAADAATTAASSSRSGGER
GSTGREQARAARAQSHAERALLEFVKDLVGSFLADSFGLSSFARVLRVFV
RTGFPVAAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013929RNA_pol_II_AP1_C
IPR039913RPAP1/Rba50