prot_H-elongata_contig54020.12768.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54020.12768.1
Unique Nameprot_H-elongata_contig54020.12768.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length336
Homology
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: D7G6V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V5_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.310e-33
Identity = 89/189 (47.09%), Postives = 104/189 (55.03%), Query Frame = 0
Query:  160 ADSRHPG-TRKERRGWGKTRPKPPAAPADNDSRSRDGEDASFTRAVPEDRRSEWPKRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLPPD-YIDAASADWGKHGN---EVGWVVDKKPREVPKHLVGNKED--------APVAVERVGSKDHRVGVSGAQSSRKPKSKYKNLA 335
            A +  PG ++K+RRGWGK R     A AD        +DA       ++ R     RKK RSRQKNIRKDKRP ++RPAYLR GDPEFSGRGLT ETR  LGLP D + DA  A WGK G       WV+DKKPR +PKHL  +  D        +  A    G K          SS   KSKYKNL+
Sbjct:   15 AGTAEPGESKKQRRGWGKARSTSAGAAADTAENVNHAKDAGERNGRTDEHRP----RKKTRSRQKNIRKDKRPADKRPAYLRAGDPEFSGRGLTEETRKFLGLPQDDFGDAPPAGWGKPGKVGPTASWVIDKKPRRLPKHLEPDAGDEGTNAATTSAAAYTDAGRKSTPAAPDATPSST-GKSKYKNLS 198          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: A0A6H5KDC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC6_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 6.060e-28
Identity = 71/133 (53.38%), Postives = 84/133 (63.16%), Query Frame = 0
Query:  167 TRKERRGWGKTRPKPPAAPADNDSRSRDGEDASFTRAVPEDRRSEWPKRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLPP-DYIDAASADWGKHGN---EVGWVVDKKPREVPKHL 295
            ++K+RRGW K R K   A AD        +DA       ++ RS    RKK RSRQKNIRKD RP ++RPAYLR  +PEFSGRGLT ETR  LGLP  D+ DA  A WGKHG       WV+DKKPR +PK+L
Sbjct:  282 SKKQRRGWRKARSKSAGAAADTAENVDQAKDAGGRSGRMDEHRS----RKKTRSRQKNIRKDNRPADERPAYLRAENPEFSGRGLTEETRKFLGLPQADFGDAPPAGWGKHGKVRPTASWVIDKKPRRLPKYL 410          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: A0A836CE61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE61_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.360e-9
Identity = 47/122 (38.52%), Postives = 60/122 (49.18%), Query Frame = 0
Query:  214 KRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLPPDYIDAASADWGKHGNEVGWVVDKKPREVPKHLVGNKEDAPVAVERVGSKDHRVGVSGAQSSRKPKSKYKNLA 335
            KR K RSRQKNIR+DKR   QRPA+L+ G  +F GR +T ETR  LGLP    D  +A        + W VDK+P                         H  G  G +++R+   KYKNL+
Sbjct:  248 KRTKTRSRQKNIRRDKRDTAQRPAHLQPGSDDFRGRAMTDETRQRLGLPSGAGDDGAA-------MLTWAVDKQP------------------------SHGEGAGGGKTARR---KYKNLS 335          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: A0A1E7EUM6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUM6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.350e-6
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  214 KRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLPPDYIDAASADWGKHGNEVG---WVVDKKP 288
            KRKKVRSRQKNI KD R  +++PA+L  G+P + GR +T  TR  L LPP       +      N+ G   +V+D+ P
Sbjct:  224 KRKKVRSRQKNIYKDNRTKDEKPAHLTRGNPNYQGRPMTEATREKLNLPPPTKKIRPSYNNSSKNQDGNTLFVIDRSP 301          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: K0SN52_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SN52_THAOC)

HSP 1 Score: 59.7 bits (143), Expect = 2.590e-6
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0
Query:  214 KRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLP-PDYIDAASA---DWGKHGNEVGWVVDKKPRE 290
            KRKK RSRQKNIRKD R +E RP +L  G  +++GR LT ET+  LG+   D    A A   +W +   E   VVDK  R+
Sbjct:  141 KRKKTRSRQKNIRKDNRSIEDRPTHLVRGSADYAGRPLTFETKKKLGIARTDQQQTAKAFGGNWAEEKVETS-VVDKSTRD 220          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: A0A7S3Q041_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q041_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.440e-6
Identity = 44/132 (33.33%), Postives = 61/132 (46.21%), Query Frame = 0
Query:  217 KVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGLPPDYID------------AASADWGKHGNEVGWVVDKKPREVPKHL-VGNKEDAPVAVERVGS-KDHRVGVSGAQSSRKPKSKYKNL 334
            K+RSRQKNI+KD R   Q+P +L++G  E++GR +T ETR+ L LP                 + +A    H ++ G  +D    E    L V    + P   E VGS K               KSK+KNL
Sbjct:  179 KIRSRQKNIKKDSRTSSQKPEHLKLGHKEYAGRPMTQETRSYLNLPESRAQRIRREREKMKETSTTAANSHHFDQGGLAIDDLLGETSTGLDVATSSELPETGELVGSSKXXXXXXXXXXXXXXXKSKFKNL 310          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: A0A7S3GW78_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW78_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.000e-5
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:  222 QKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGL 261
            QKNIR+D RP E +PAYL +G+ EF GR LT +T++VLGL
Sbjct:  181 QKNIRRDNRPAESKPAYLHVGNKEFKGRQLTEQTKSVLGL 220          
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Match: B8C7Z8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7Z8_THAPS)

HSP 1 Score: 58.2 bits (139), Expect = 1.250e-5
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  205 PEDRRSEWPKRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRGLTPETRNVLGL 261
            P D ++  P+RKK+RSRQKNIRKD R  E++P +L  G+  ++GR LT  TR+ LGL
Sbjct:  148 PNDSKNNKPQRKKIRSRQKNIRKDTRATEEKPTHLVHGNVGYAGRPLTKATRDKLGL 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54020.12768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G6V5_ECTSI2.310e-3347.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC6_9PHAE6.060e-2853.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE61_9STRA1.360e-938.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7EUM6_9STRA1.350e-643.59Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
K0SN52_THAOC2.590e-646.91Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S3Q041_9STRA3.440e-633.33Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3GW78_9STRA1.000e-562.50Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
B8C7Z8_THAPS1.250e-552.63Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54020contigH-elongata_contig54020:2378..3385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54020.12768.1mRNA_H-elongata_contig54020.12768.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54020 2378..3798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54020.12768.1 ID=prot_H-elongata_contig54020.12768.1|Name=mRNA_H-elongata_contig54020.12768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=336bp
QPEPTALQKKLARKHRREEIADAIAGDVGTHGVAEGDIESEGESKTASFK
RKKKEPRIDRAAGERPAKITVDKQTERELGKKVVKVKEDDEGIGNNEHLK
SEKRISNRKTRRNKINSRGAGGDGGGDAAVSEPQQAAAENANASVEEPLT
KEQEPSDECADSRHPGTRKERRGWGKTRPKPPAAPADNDSRSRDGEDASF
TRAVPEDRRSEWPKRKKVRSRQKNIRKDKRPLEQRPAYLRIGDPEFSGRG
LTPETRNVLGLPPDYIDAASADWGKHGNEVGWVVDKKPREVPKHLVGNKE
DAPVAVERVGSKDHRVGVSGAQSSRKPKSKYKNLA*
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