prot_H-elongata_contig54011.12766.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54011.12766.1
Unique Nameprot_H-elongata_contig54011.12766.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A6H5LJB3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJB3_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 2.800e-92
Identity = 135/170 (79.41%), Postives = 148/170 (87.06%), Query Frame = 0
Query:    1 SFGGKVHADFPPLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQADGAATKVS 170
            S GG VH D PPLVYHERYS +PWP  HSFPMSKF DLA+LLAD  GPLG  GPVAM GAFRPMDRPPH+WFEAVHDP YYRAF+GG LD K +RRIGLP+++ LVDRTLLEVSGTVL A LAL++GLACNLAGGTHHAH+ FGSGYTILNDLAVASRVVQADG A+KV+
Sbjct:   40 SLGGIVHKDLPPLVYHERYSADPWPPKHSFPMSKFRDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHKWFEAVHDPLYYRAFVGGTLDGKVIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVT 209          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A8J6CHI7_DIALT (Hist_deacetyl domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHI7_DIALT)

HSP 1 Score: 168 bits (426), Expect = 1.320e-48
Identity = 92/158 (58.23%), Postives = 103/158 (65.19%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQADGAATKV 169
            PLVYH +YS EPWP  H F MSKF DL   L      LG  G         P+D PP EWF AVHD +YY  F  G L   AMRRIG  +S  LV+RT LE +GTVL A LAL +GLACNL GGTHHAHR FGSG+TILNDLAV++R VQ  G A +V
Sbjct:    9 PLVYHAKYSFEPWPAAHRFRMSKFVDLHDHL------LGR-GIATKEQLHAPIDDPPDEWFTAVHDADYYFGFTDGTLPAPAMRRIGFEWSAQLVERTRLECAGTVLAARLALEHGLACNLGGGTHHAHRDFGSGFTILNDLAVSARYVQNTGLAARV 159          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A7S4BJF9_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJF9_CHRCT)

HSP 1 Score: 163 bits (412), Expect = 3.390e-47
Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSK---ALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQA 162
            PLVYH RYS  PWP TH FPM KF+DL   +         +G +A A ++   + P H WFEAVHDP YYR+F+ G L E+  RRIG        AL+DRT LE +GTVLTA LAL +GLACNLAGGTHHAHR+FGSG+TILNDLAVA+  ++A
Sbjct:   12 PLVYHARYSA-PWPRTHRFPMWKFSDLHAFIK-------RTG-LASAASWHEPELPDHAWFEAVHDPVYYRSFIEGRLGEEQERRIGFRNEMRKPALIDRTRLECAGTVLTAQLALEHGLACNLAGGTHHAHRSFGSGFTILNDLAVAAARIRA 156          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A7S4BJF7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJF7_CHRCT)

HSP 1 Score: 163 bits (412), Expect = 1.890e-46
Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSK---ALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQA 162
            PLVYH RYS  PWP TH FPM KF+DL   +         +G +A A ++   + P H WFEAVHDP YYR+F+ G L E+  RRIG        AL+DRT LE +GTVLTA LAL +GLACNLAGGTHHAHR+FGSG+TILNDLAVA+  ++A
Sbjct:   12 PLVYHARYSA-PWPRTHRFPMWKFSDLHAFIK-------RTG-LASAASWHEPELPDHAWFEAVHDPVYYRSFIEGRLGEEQERRIGFRNEMRKPALIDRTRLECAGTVLTAQLALEHGLACNLAGGTHHAHRSFGSGFTILNDLAVAAARIRA 156          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A7S2IEI5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IEI5_9EUKA)

HSP 1 Score: 156 bits (394), Expect = 4.410e-45
Identity = 88/149 (59.06%), Postives = 95/149 (63.76%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPF---SKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVAS 157
            PLVYH  YS  PWP  H FPM KFA L   L        S G    A   RP++ PPH WFEAVHD EYYRAFL G L  +  RRIG         L+ RTLLE SGTV T  LAL +GLA NLAGGTHHAHR FGSG+TILNDLAVA+
Sbjct:    1 PLVYHPPYSC-PWPPAHRFPMWKFAGLYAHLT-------SIGIATPANIHRPLNDPPHAWFEAVHDREYYRAFLAGQLGSEQERRIGFKEHAREAPLIQRTLLECSGTVRTVQLALEHGLAANLAGGTHHAHRGFGSGFTILNDLAVAA 141          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A6V1V0D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0D3_HETAK)

HSP 1 Score: 159 bits (403), Expect = 1.620e-44
Identity = 84/160 (52.50%), Postives = 101/160 (63.12%), Query Frame = 0
Query:    3 GGKVHADFPPLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGA-FRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQ 161
            G K +   PP VYH  YS  PWP  H FPM KF  L ++L  +         +   G  F P+D PPHEWF  VHD  YY+ FL   L     RRIG      LV RT LEV+GT+LTA LAL++GLACNLAGGTHHAH+ +GSGYTILNDLA+ ++V+Q
Sbjct:   54 GVKWNKSSPPFVYHPEYSC-PWPSNHRFPMWKFKGLFEVLCKDH--------IIREGEYFVPLDDPPHEWFTLVHDERYYKGFLDNTLTNDEWRRIGFRPGPGLVRRTRLEVAGTLLTAQLALQHGLACNLAGGTHHAHKGYGSGYTILNDLAITAKVLQ 204          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: UPI001746C654 (histone deacetylase n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001746C654)

HSP 1 Score: 157 bits (397), Expect = 2.520e-44
Identity = 88/159 (55.35%), Postives = 106/159 (66.67%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAK-LLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQADGAATKV 169
            PLVYH  Y   P P  H FPM+KF  L + L+AD          VA+A  F   DRPP +W E VH PEY +A+  G LD KA RRIGLP+S ALV+RT + V GT+LTA LAL+ GLACN AGGTHHA  ++GSG+ I NDLA+A+RVVQ  G A K+
Sbjct:    4 PLVYHPDYVV-PLPPEHRFPMAKFRMLYEALIADG---------VALASQFHTPDRPPKDWLELVHTPEYVQAYCEGTLDPKAQRRIGLPWSPALVNRTCVAVGGTILTAKLALQAGLACNTAGGTHHAFPSYGSGFCIFNDLAIAARVVQRLGLAQKI 152          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A8J7JXQ9_9CYAN (Histone deacetylase n=1 Tax=Oculatella sp. LEGE 06141 TaxID=1828648 RepID=A0A8J7JXQ9_9CYAN)

HSP 1 Score: 154 bits (389), Expect = 4.070e-43
Identity = 85/159 (53.46%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADL-AKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQADGAATKV 169
            PLVYH  Y   P P TH FPM+KF  L   LLAD          VA    F   +RPP +W E VH P+Y   +  G LD KA RRIGLP+S ALV+RTL  V GT+LTA LAL +GLACN AGGTHHA  ++GSG+ I NDLA+A+RV+Q  G A ++
Sbjct:    4 PLVYHPNY-VAPLPPTHRFPMAKFGQLYTTLLADG---------VAQPTQFHSPERPPQDWLELVHTPDYVGQYCEGTLDAKAQRRIGLPWSAALVNRTLTAVGGTILTAQLALEHGLACNTAGGTHHAFPSYGSGFCIFNDLAIAARVMQHLGLAQRI 152          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A2T1FDA4_9CYAN (Histone deacetylase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1FDA4_9CYAN)

HSP 1 Score: 154 bits (388), Expect = 5.740e-43
Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQ 161
            P++YHE Y   P P  H FPM+KF  L ++L  +         VA    F   + PP EW E VHD  Y +A+  G LD KA+RRIGLP+S+AL +RT + V+GTVLTA LAL YGLACN AGGTHHA   FGSG+ I NDLA+ASRV+Q
Sbjct:    4 PIIYHEDY-VAPLPPGHRFPMAKFGMLYQMLIADG--------VADRSQFHAPELPPQEWIELVHDRHYVQAYCNGTLDAKAIRRIGLPWSRALANRTFIAVAGTVLTAKLALEYGLACNTAGGTHHAFPGFGSGFCIFNDLAIASRVLQ 144          
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Match: A0A1C0VLD4_9CYAN (Histone deacetylase n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VLD4_9CYAN)

HSP 1 Score: 154 bits (388), Expect = 5.740e-43
Identity = 86/158 (54.43%), Postives = 101/158 (63.92%), Query Frame = 0
Query:   12 PLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLGSSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLPFSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTILNDLAVASRVVQADGAATKV 169
            PLVYH  Y   P P  H FPM KFA L   L  +    G++ P      F   DRPP +W E VHD  Y  A+  G LD KA RRIGLP+S AL +RT +   GTVLTA LALR+GLACNLAGGTHHA   FGSG+ I NDLA+A+RV+QA+G   +V
Sbjct:    4 PLVYHPDY-VAPLPPGHRFPMQKFARLYDRLRSD----GTATPEQ----FHQPDRPPQDWIELVHDRAYVEAYCQGTLDPKAQRRIGLPWSPALANRTCVAAGGTVLTARLALRHGLACNLAGGTHHAFPDFGSGFCIFNDLAIATRVLQAEGLVDRV 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54011.12766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJB3_9PHAE2.800e-9279.41Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A8J6CHI7_DIALT1.320e-4858.23Hist_deacetyl domain-containing protein n=2 Tax=Di... [more]
A0A7S4BJF9_CHRCT3.390e-4757.79Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S4BJF7_CHRCT1.890e-4657.79Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S2IEI5_9EUKA4.410e-4559.06Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A6V1V0D3_HETAK1.620e-4452.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001746C6542.520e-4455.35histone deacetylase n=1 Tax=Phormidium tenue TaxID... [more]
A0A8J7JXQ9_9CYAN4.070e-4353.46Histone deacetylase n=1 Tax=Oculatella sp. LEGE 06... [more]
A0A2T1FDA4_9CYAN5.740e-4354.00Histone deacetylase n=2 Tax=unclassified Cyanobact... [more]
A0A1C0VLD4_9CYAN5.740e-4354.43Histone deacetylase n=3 Tax=Limnothrix TaxID=13260... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 99..170
e-value: 1.9E-7
score: 30.8
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 12..171
e-value: 4.0E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR43497FAMILY NOT NAMEDcoord: 10..169
NoneNo IPR availablePANTHERPTHR43497:SF1HISTONE DEACETYLASE 12coord: 10..169
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 12..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54011contigH-elongata_contig54011:2011..3684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54011.12766.1mRNA_H-elongata_contig54011.12766.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54011 2011..3684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54011.12766.1 ID=prot_H-elongata_contig54011.12766.1|Name=mRNA_H-elongata_contig54011.12766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
SFGGKVHADFPPLVYHERYSTEPWPETHSFPMSKFADLAKLLADEEGPLG
SSGPVAMAGAFRPMDRPPHEWFEAVHDPEYYRAFLGGLLDEKAMRRIGLP
FSKALVDRTLLEVSGTVLTAHLALRYGLACNLAGGTHHAHRAFGSGYTIL
NDLAVASRVVQADGAATKVSAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf