prot_H-elongata_contig53945.12759.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig53945.12759.1
Unique Name	prot_H-elongata_contig53945.12759.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	95

Homology

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: D7G1P5_ECTSI (26S proteasome regulatory ATPase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P5_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.060e-58
Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGRAHIL+IHSKSMNVDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN
Sbjct:   86 KVEFGLPDLEGRAHILSIHSKSMNVDRDIRYELVARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 179

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A6H5JJZ9_9PHAE (AAA domain-containing protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5JJZ9_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.770e-55
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGRAHIL IHSKSMNVDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN
Sbjct:  343 KVEFGLPDLEGRAHILGIHSKSMNVDRDIRYELVARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 436

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A7R9UDP4_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7R9UDP4_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.060e-54
Identity = 85/94 (90.43%), Postives = 92/94 (97.87%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGRAHIL IH+K+M+VDR+IRYELIARLCPNTTGAELRSVCTEAGMFAIRAR+KSISEKDFL+AVNKVIKGY KFSSTPKYMVYN
Sbjct:   67 KVEFGLPDLEGRAHILKIHAKTMSVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARRKSISEKDFLEAVNKVIKGYHKFSSTPKYMVYN 160

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: K0RTL2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTL2_THAOC)

HSP 1 Score: 173 bits (439), Expect = 1.580e-53
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGR HIL IHSK MN DRDIR+ELIARLCPNTTGAEL SVCTEAGMFAIRAR+KS+SEKDFLD+VNKV+KGY+KFSSTPKYMVYN
Sbjct:   86 KVEFGLPDLEGRGHILKIHSKKMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFAIRARRKSVSEKDFLDSVNKVVKGYKKFSSTPKYMVYN 179

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A7S2SSE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.040e-52
Identity = 80/94 (85.11%), Postives = 90/94 (95.74%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGR HIL IH+K M+VDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRAR+K+I+EKD LD++NKVIKGYQKFS+TPKYMVYN
Sbjct:   68 KVEFGLPDLEGRTHILKIHAKRMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRARRKAITEKDMLDSINKVIKGYQKFSATPKYMVYN 161

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A836CGS4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS4_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.190e-52
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGRAHIL IHSKSMNVDR IRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISE+DFL+AVNKVIKGY KFSSTPKYMVYN
Sbjct:  343 KVEFGLPDLEGRAHILTIHSKSMNVDRGIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEQDFLEAVNKVIKGYSKFSSTPKYMVYN 436

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A6V1T8U9_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1T8U9_HETAK)

HSP 1 Score: 174 bits (441), Expect = 7.220e-51
Identity = 83/94 (88.30%), Postives = 91/94 (96.81%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGR HIL IH+++M+VDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRAR+KSI+EKDFLDAV KVIKGYQKFSSTPKYMVYN
Sbjct:  343 KVEFGLPDLEGRTHILKIHTRAMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRARRKSITEKDFLDAVQKVIKGYQKFSSTPKYMVYN 436

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A7S2I8S2_9STRA (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S2I8S2_9STRA)

HSP 1 Score: 172 bits (435), Expect = 9.210e-51
Identity = 81/94 (86.17%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGR HIL IHSK MN DRDIR+ELIARLCPNTTGAEL SVCTEAGMF+IRAR+KS+SEKDFLD+VNKV+KGY+KFSSTPKYMVYN
Sbjct:  263 KVEFGLPDLEGRGHILKIHSKRMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFSIRARRKSVSEKDFLDSVNKVVKGYKKFSSTPKYMVYN 356

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A482SHN7_9ARCH (26S protease regulatory subunit n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482SHN7_9ARCH)

HSP 1 Score: 172 bits (435), Expect = 2.010e-50
Identity = 81/94 (86.17%), Postives = 90/94 (95.74%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEF LPDLEGR HIL IH+K+M+VDRDIRYEL+ARLCPNTTGAELRSVCTEAGM+AIRAR+KS SEKDFLD++NKVIKGYQKFSSTPKYMVYN
Sbjct:  296 KVEFALPDLEGRTHILKIHAKTMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMYAIRARRKSASEKDFLDSINKVIKGYQKFSSTPKYMVYN 389

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BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Match: A0A7S2PIH2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PIH2_9STRA)

HSP 1 Score: 172 bits (436), Expect = 5.310e-50
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 94
            +VEFGLPDLEGR HIL IHSK MN DRDIRYEL+ARLCPNTTGAEL SVCTEAGMFAIRAR+KS+SEKDFLD+V+KVIKGY+KFSSTPKYMVYN
Sbjct:  357 KVEFGLPDLEGRTHILKIHSKRMNCDRDIRYELLARLCPNTTGAELHSVCTEAGMFAIRARRKSVSEKDFLDSVSKVIKGYKKFSSTPKYMVYN 450

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot

BLAST of mRNA_H-elongata_contig53945.12759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1P5_ECTSI	1.060e-58	96.81	26S proteasome regulatory ATPase subunit n=1 Tax=E...	[more]
A0A6H5JJZ9_9PHAE	1.770e-55	96.81	AAA domain-containing protein n=2 Tax=Ochrophyta T...	[more]
A0A7R9UDP4_9STRA	1.060e-54	90.43	Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696...	[more]
K0RTL2_THAOC	1.580e-53	87.23	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2SSE9_9STRA	1.040e-52	85.11	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A836CGS4_9STRA	1.190e-52	93.62	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A6V1T8U9_HETAK	7.220e-51	88.30	Hypothetical protein n=2 Tax=Chattonellaceae TaxID...	[more]
A0A7S2I8S2_9STRA	9.210e-51	86.17	Hypothetical protein n=3 Tax=Mediophyceae TaxID=58...	[more]
A0A482SHN7_9ARCH	2.010e-50	86.17	26S protease regulatory subunit n=2 Tax=cellular o...	[more]
A0A7S2PIH2_9STRA	5.310e-50	87.23	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 29..71 e-value: 1.3E-9 score: 37.7
None	No IPR available	GENE3D	1.10.8.60		coord: 7..79 e-value: 2.0E-24 score: 87.1
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 1..91
IPR035245	26S Proteasome regulatory subunit 7	PANTHER	PTHR23073:SF13	26S PROTEASOME REGULATORY SUBUNIT 7	coord: 1..91
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig53945	contig	H-elongata_contig53945:3167..3451 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig53945.12759.1	mRNA_H-elongata_contig53945.12759.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig53945 3167..3451 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig53945.12759.1 ID=prot_H-elongata_contig53945.12759.1|Name=mRNA_H-elongata_contig53945.12759.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
QVEFGLPDLEGRAHILNIHSKSMNVDRDIRYELIARLCPNTTGAELRSVC
TEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041569	AAA_lid_3
IPR035245	PSMC2
IPR027417	P-loop_NTPase