prot_H-elongata_contig53893.12754.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53893.12754.1
Unique Nameprot_H-elongata_contig53893.12754.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.640e-58
Identity = 103/203 (50.74%), Postives = 139/203 (68.47%), Query Frame = 0
Query:    1 MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 202
            +V L + C K  G TTGEDL  +++AM+  + LT R V   TDCEPSMVKAGR L E    TH+GC CHR+E +TS  F  PGV K++ALAR +VTR   SSQA+DRL+++   V +   +V+QDVET+WWST++   RL+ LRR +  HE +D+I PLL+  DW VL+++EP+  PF+  QK  E S +VT SLV+P I +L
Sbjct:   79 LVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADL 281          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 3.150e-57
Identity = 106/201 (52.74%), Postives = 140/201 (69.65%), Query Frame = 0
Query:    4 LVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNL-TEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 202
            L L CAK  G+TTGEDL A +  MV+ HDLTGRV+   TDCEPSM+KAGR L  +    +H+GC+ HR+E  TS VF+   +  ++ LAR+LV R  KSSQ A RL +LCG + + PL V+QDVET+WWST +M  RL+YL +A++LHES+D + PLL   DW VL ++EP+L PFM  QK LE +  VTGS+ +  + EL
Sbjct:   73 LSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAEL 272          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 8.710e-54
Identity = 104/203 (51.23%), Postives = 134/203 (66.01%), Query Frame = 0
Query:    1 MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 202
            +V L L C K    T GEDL  +++AM+  + LTGR V   TDCE SMVKAGR L E    TH+GC CHR+E +TS  F  PGV K++ALAR +VTR T SSQA+DRL+++C  V +    V+QDVET+WWST+    RL+ LRR +  HE +D+  PLL+  DW VL+++E +L PFM  QK LE S  VT  LV P I +L
Sbjct:   35 LVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADL 237          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.520e-52
Identity = 103/201 (51.24%), Postives = 134/201 (66.67%), Query Frame = 0
Query:    4 LVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNL-TEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 202
            L L+C K  GST GEDL   I +M++ H LTGRV    TDCEPSMVKAGR L        H+GC+ HR+E  TS VF+   +  ++A AR++V R  +SSQ + RL    G + + PL V+QDVET+WWS+ +M ERL+YL +A++LHES DNI P+L   DW VL ++EP+L PFM  QK LE +  VTGS+ VP I EL
Sbjct:  109 LSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGEL 308          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.200e-50
Identity = 97/203 (47.78%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    1 MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLE-SNNVTGSLVVPLICEL 202
            +V L L   K  G TTGEDL  +++AM+  + LTGR V   TDCEP MVKAGR L E    +H+GC CHR E +TS  F  PGV K++AL R +VTR T SSQA++RL+++C  V +   +V+QDVET+WWST                   +D+I PLL   DW VL+++EP+L PFM  QK LE S  VT SLV   I +L
Sbjct:   23 LVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADL 209          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A498MJP0_LABRO (Zinc finger BED domain-containing 6-like isoform X2 n=2 Tax=Labeo rohita TaxID=84645 RepID=A0A498MJP0_LABRO)

HSP 1 Score: 73.6 bits (179), Expect = 2.700e-12
Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 0
Query:    1 MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSM-ALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELH-ESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNN-VTGSLVVPLI 199
            M ++VL  +K   S T +++  ++  ++    LTG V    TD   +MV A     +K    H+ C  H I  +     +   V   + + AR +V+    S++A ++L      +G  PL+++Q+V+T+W STH M +RL+ LR  V     SL N +  L   D+ ++     VL PF Y  ++L     V+ S ++P+I
Sbjct:    1 MGSVVLGVSKFPKSHTADNIKEALLELISDWGLTGSVAAMVTDNAANMVSA----IQKLGLRHLPCFAHTINLIVKRAVEEHEVMADIRSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLSNDIMPLSSADFDIISESLEVLAPFKYATEELSGEKRVSASKIIPII 198          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: J9JWR9_ACYPI (BED-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JWR9_ACYPI)

HSP 1 Score: 73.2 bits (178), Expect = 1.400e-11
Identity = 56/186 (30.11%), Postives = 94/186 (50.54%), Query Frame = 0
Query:    6 LSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSL-VFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAV-ELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNN 189
            L C K E   T ++L   ++  V+  ++  +V    +D   ++V A R+      F HV C  H I  V    + ++  ++K +   +S+V    +SS A  +LQE+   +G+PPL++ QDV T+W STH M +R+V ++ AV      L   V  L  V+W ++E    +L  F  V K++ S  
Sbjct:  549 LGCEKFEERHTSDNLALYLKNTVREWNIENKVAAVVSDNASNIVGAIRDCN----FRHVPCFAHSINLVVQQGLKNISHIQKKV---KSIVEHFKRSSHAQSKLQEIQQQMGLPPLKLKQDVVTRWNSTHDMFKRIVEIKDAVVSTLAILQCDVEQLTVVEWQIVEWSTNILQIFAEVTKEISSER 727          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A498M0F8_LABRO (Zinc finger BED domain-containing 1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M0F8_LABRO)

HSP 1 Score: 64.3 bits (155), Expect = 4.830e-9
Identity = 53/188 (28.19%), Postives = 89/188 (47.34%), Query Frame = 0
Query:    4 LVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSM-ALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELH-ESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNN 189
            +VL  +K   S T +++  ++  ++    LTG V    TD   +MV A     +K    H+ C  H I  +     +   V   + + AR +V+    S++A ++L      +G  PL+++Q+V+T+W STH M +RL+ LR  V     SL N V      D+ ++     VL PF Y  ++L    
Sbjct:   55 VVLGVSKFPKSHTADNIKEALSELISDWGLTGSVAAMVTDNAANMVSA----IQKLGLRHLPCFAHTINLIVKRAVEEHEVMADIHSRARRVVSYFRSSTKATEKLILAQERMGRQPLKLLQEVDTRWNSTHDMLQRLIDLREPVGAALASLANFVY----ADFDIISESLEVLAPFKYATEELSGEK 234          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: A0A6V7VT18_9BILA (Hypothetical protein n=1 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7VT18_9BILA)

HSP 1 Score: 63.2 bits (152), Expect = 1.420e-8
Identity = 44/155 (28.39%), Postives = 78/155 (50.32%), Query Frame = 0
Query:   58 KRVFTHVG-----CTCHRIE-CVTSLVF----DVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELHESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNNVTGSLVVPLICEL 202
            KRV T +G     C  H ++ CV + +     D P +   +  A+  V +  KS   ++  +EL   + +P L + +D+E +W ST  M +RL+ +RR ++L    +NI P     DW  L  ++ +L       K L++  V+ S+++P+ C L
Sbjct:    2 KRVTTDLGFKSQDCLAHVLQLCVKAGISLFNNDEPELSNLIERAKRFVRKIKKSRVLSEEFKELQAALELPSLSLQKDIEVRWNSTFEMIDRLIKIRRVIDLLCDRNNI-PSFSNTDWLSLGSIKKLLQSVYDATKLLQNQTVSISVIIPIYCAL 155          
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Match: UPI000B93611E (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B93611E)

HSP 1 Score: 62.8 bits (151), Expect = 4.260e-8
Identity = 51/192 (26.56%), Postives = 92/192 (47.92%), Query Frame = 0
Query:   14 STTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVKAGRNLTEKRVFTHVGCTCHRIEC-VTSLVFDVPGVKKSMALARSLVTRCTKSSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELH-ESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNNV-TGSLVVPLICEL 202
            S TGE++ +++  +    ++T ++V   +D   ++  A     +K    H  C  H +   V   +     + + +   R++V     SS A ++L+E    +G+P L+V QDV T+W S   M ERL+ ++  +     SL      L   +W ++    P+L PF ++  +L      T SLV+PLI +L
Sbjct:  167 SHTGENIASALSYIFNEWNITHKIVTIVSDSGANIKNAINKHLKKY---HHPCVAHTLNLSVNDAINKNTELLQVLKTCRAIVGHFKHSSYATEKLREFQKHMGLPELKVKQDVSTRWNSCLIMVERLIEIKNPISAAMSSLRRAPNCLTATEWDLIADCAPILKPFEHMTSELSGEKYPTLSLVIPLIRDL 355          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53893.12754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE9.640e-5850.74Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI3.150e-5752.74Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE8.710e-5451.23Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KUY5_9PHAE1.520e-5251.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVI1_9PHAE4.200e-5047.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A498MJP0_LABRO2.700e-1228.71Zinc finger BED domain-containing 6-like isoform X... [more]
J9JWR9_ACYPI1.400e-1130.11BED-type domain-containing protein n=1 Tax=Acyrtho... [more]
A0A498M0F8_LABRO4.830e-928.19Zinc finger BED domain-containing 1-like protein n... [more]
A0A6V7VT18_9BILA1.420e-828.39Hypothetical protein n=1 Tax=Meloidogyne enterolob... [more]
UPI000B93611E4.260e-826.56zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 4..201
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 4..201
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53893contigH-elongata_contig53893:2496..3101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53893.12754.1mRNA_H-elongata_contig53893.12754.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53893 2496..3335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53893.12754.1 ID=prot_H-elongata_contig53893.12754.1|Name=mRNA_H-elongata_contig53893.12754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
MVTLVLSCAKKEGSTTGEDLTASIEAMVKTHDLTGRVVVGNTDCEPSMVK
AGRNLTEKRVFTHVGCTCHRIECVTSLVFDVPGVKKSMALARSLVTRCTK
SSQAADRLQELCGTVGIPPLRVIQDVETQWWSTHSMDERLVYLRRAVELH
ESLDNIVPLLEPVDWAVLEMLEPVLLPFMYVQKKLESNNVTGSLVVPLIC
EL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf