prot_H-elongata_contig53788.12737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53788.12737.1
Unique Nameprot_H-elongata_contig53788.12737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length301
Homology
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: D8LRB2_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB2_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 2.510e-75
Identity = 124/162 (76.54%), Postives = 144/162 (88.89%), Query Frame = 0
Query:  138 TTAVTEPHLKTAGQPLKHADTAKSPKGVSTDLQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGL-EQEGEDSDIDF 298
            TTAVTEPHLKTAGQPL HA+ A+SP G+STDLQ KL+ALKLRRKHRF+ MRIEGTEVVAETV AP+ GP EL+AALP+SDCRYAVYDQ I+T DGRK +KLFFF+W+PHNATP NKM Y +GKVTV+QRLEG+YDVAA+ F D+EVALGL +++ EDSDIDF
Sbjct:  406 TTAVTEPHLKTAGQPLTHANRAESPTGMSTDLQDKLKALKLRRKHRFVTMRIEGTEVVAETVAAPAEGPAELKAALPYSDCRYAVYDQAIVTADGRKANKLFFFTWVPHNATPHNKMAYSHGKVTVRQRLEGLYDVAASSFGDVEVALGLVDEDEEDSDIDF 567          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A835ZF29_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF29_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.930e-45
Identity = 77/128 (60.16%), Postives = 97/128 (75.78%), Query Frame = 0
Query:  173 LRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQEGEDSDIDFEN 300
            L+ LKLRRK+RFLV+RIEG EVV +    P+ G  +L AALPFSDCRY VYDQ+  T DGRKTS+L F SWLPHNATP  KM Y +GK  V++R+EG++DVAA+ F D+  ALG+E + EDSD D ++
Sbjct:    4 LKDLKLRRKYRFLVLRIEGGEVVPDATAPPAAGAPQLEAALPFSDCRYCVYDQDYTTDDGRKTSRLLFISWLPHNATPYAKMAYAHGKTAVRRRMEGLFDVAASAFADVAAALGIEDD-EDSDSDLDS 130          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: K3WUI7_GLOUD (ADF-H domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI7_GLOUD)

HSP 1 Score: 140 bits (354), Expect = 8.870e-38
Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 0
Query:  143 EPHLKTAGQP--LKHADTAKSPKGVST---DLQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQ-EGEDSDIDFEN 300
            EPH+KTAG P  ++H D    P    T   ++ ++ + LK+RRKHRF++ +I+G ++V +  G P+ G  +   ALP SDCRYAVYD E LT DGRK+SKLFF +W+PHN+ PQ KM Y + K T++   +G  DV AN  ++IE ++G+   +  DS  DFE+
Sbjct:    3 EPHMKTAGVPKYIRHQDDV--PTNAITPAANVAAEFKQLKMRRKHRFVLFKIDGAQMVVDATGPPNAGFADFLRALPDSDCRYAVYDHEFLTSDGRKSSKLFFVTWIPHNSNPQFKMAYTHAKSTIRAVCDGALDVNANTKKEIEQSMGVTSGDASDSGSDFED 164          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A8K1CHH4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHH4_PYTOL)

HSP 1 Score: 136 bits (343), Expect = 3.750e-36
Identity = 74/165 (44.85%), Postives = 111/165 (67.27%), Query Frame = 0
Query:  143 EPHLKTAG--QPLKHAD----TAKSPKGVSTDLQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQ-EGEDSDIDFEN 300
            EPHLKTAG  Q ++H D     A +P   S ++ ++ + LK+RRKHRF++ RIEG +VV + VGAP++   +   ALP S+CRYAVYD E +T DGRK+SKLFF +W+P N+ P  KM Y + K T++   +G +DV A + +++E  +G+   +G DSD +F++
Sbjct:    3 EPHLKTAGVAQYIRHQDDVPVNAITP---SEEVTAEFKQLKMRRKHRFVLFRIEGAQVVVDGVGAPTSSFNDFLNALPDSECRYAVYDHEFITGDGRKSSKLFFVTWIPQNSHPGFKMAYTHAKSTIRAVCDGCFDVNAVIKKEVEQGMGITNADGSDSDSEFDD 164          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A2D4BDZ2_PYTIN (ADF-H domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDZ2_PYTIN)

HSP 1 Score: 129 bits (323), Expect = 3.540e-33
Identity = 71/163 (43.56%), Postives = 104/163 (63.80%), Query Frame = 0
Query:  143 EPHLKTAGQPLKHA----DTAKSPKGVSTDLQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQ-EGEDSDIDFEN 300
            EPHLKTAG P K+A    D + S    + D+ ++ + LK+RRK RF++ RIEG E+V ++ G P+    +  +ALP  +CRYAVYD E +T DGRK+SKLFF +W+P ++ P  KM Y + K T++   EG  D+ A M  +IE  +G+    G DSD +F++
Sbjct:    3 EPHLKTAGVP-KYARHQEDVSVSAITPTADVTTEFKQLKMRRKSRFVLFRIEGAEIVVDSTGPPNATFRDFLSALPDLECRYAVYDHEYVTPDGRKSSKLFFVTWIPQSSNPNFKMAYTHAKPTIRAVCEGCIDLNAVMKTEIEEGMGVNDGAGSDSDSEFDD 164          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A3R7G6H8_9STRA (ADF-H domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6H8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.440e-33
Identity = 75/170 (44.12%), Postives = 108/170 (63.53%), Query Frame = 0
Query:  137 KTTAVTEPHLKTAG--QPLKHADTAKSPKGVSTD-LQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLE---QEGEDSDIDFEN 300
            K   + EPH+KTAG  Q ++H D   +     TD + ++ + LK+RRK+R++++RIE   VV ++   PS   ++  AALP SDCRYAVYD E LT DGRK+SK+FF SW+P N+ P  KM Y + K  V+   EG +DV+A + +  EVA G+E    +  DSD +FE+
Sbjct:   28 KNINMAEPHMKTAGVAQYIRHQDDVPANAITPTDEVIAEFKQLKMRRKYRYVLLRIEAAHVVVDSTAPPSATFKDFEAALPDSDCRYAVYDHEFLTSDGRKSSKIFFVSWIPQNSHPGFKMAYTHAKSAVRAVCEGCFDVSAVIKK--EVAQGMEITSGDASDSDSEFED 195          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: W2GSY4_PHYPR (ADF-H domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=W2GSY4_PHYPR)

HSP 1 Score: 125 bits (314), Expect = 7.870e-32
Identity = 68/162 (41.98%), Postives = 104/162 (64.20%), Query Frame = 0
Query:  143 EPHLKTAG--QPLKHADTAKSPKGVSTD-LQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGL-EQEGEDSDIDFEN 300
            EPH+KTAG  Q ++H D   +     TD + ++ + LK+RRK+R++++RIE  +VV +    PS    +  AALP SDCRYAVYD E LT DGRK+SKLFF +W+P N+ P  KM Y + K  ++   EG ++V+A + ++I + + + +    DSD +FE+
Sbjct:    3 EPHMKTAGVAQFIRHQDDVPANAIAPTDAVVAEFKQLKMRRKYRYILLRIEADKVVVDATAPPSETFADFSAALPESDCRYAVYDHEFLTADGRKSSKLFFVTWIPQNSHPGFKMAYTHAKSAIQSVCEGCFEVSAVIKKEIALGMNITDGNASDSDSEFED 164          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A3F2RS88_9STRA (ADF-H domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS88_9STRA)

HSP 1 Score: 129 bits (325), Expect = 9.070e-32
Identity = 75/170 (44.12%), Postives = 108/170 (63.53%), Query Frame = 0
Query:  137 KTTAVTEPHLKTAG--QPLKHADTAKSPKGVSTD-LQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLE---QEGEDSDIDFEN 300
            K   + EPH+KTAG  Q ++H D   +     TD + ++ + LK+RRK+R++++RIE   VV ++   PS   ++  AALP SDCRYAVYD E LT DGRK+SK+FF SW+P N+ P  KM Y + K  V+   EG +DV+A + +  EVA G+E    +  DSD +FE+
Sbjct:  151 KNINMAEPHMKTAGVAQYIRHQDDVPANAITPTDEVIAEFKQLKMRRKYRYVLLRIEAAHVVVDSTAPPSATFKDFEAALPDSDCRYAVYDHEFLTSDGRKSSKIFFVSWIPQNSHPGFKMAYTHAKSAVRAVCEGCFDVSAVIKK--EVAQGMEITSGDASDSDSEFED 318          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A7S2C4C5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4C5_9STRA)

HSP 1 Score: 125 bits (314), Expect = 9.080e-32
Identity = 70/158 (44.30%), Postives = 97/158 (61.39%), Query Frame = 0
Query:  143 EPHLKTAGQPLKHADTAKSPKGVSTDLQSKLRALKLRRKHRFLVMRIE-GTE-VVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGL-EQEGEDSDID 297
            E HLKT G+  +     K+   VS +       +K+RRKH++++ +I+  TE +V E  GA     EE +A+LPFS+CRY VY+ E  T DGR T K+FF SW+P+NATP  KM Y   K  ++  L+GV+D +    E IEVA G+ E EGE+SD D
Sbjct:   10 ENHLKTGGEQKECQGKGKAGT-VSDECYPAFEQMKIRRKHKYIIFKIDTDTEAIVIEKTGAKKATLEEFKASLPFSECRYCVYEHEYTTHDGRPTDKIFFMSWMPNNATPYGKMAYAEAKGVIRGLLDGVFDSSVTALEQIEVAFGITEDEGEESDGD 166          
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Match: A0A024UN70_9STRA (ADF-H domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN70_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.310e-32
Identity = 63/155 (40.65%), Postives = 95/155 (61.29%), Query Frame = 0
Query:  143 EPHLKTAGQPLKHADTAKS--PKGVSTDLQSKLRALKLRRKHRFLVMRIEGTEVVAETVGAPSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATPQNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQEGEDSD 295
            EPH KTAG PL++A+   S  P   + +  +  + +K++RK RF+  RI+G ++V +  G P+    +L AALP SDCRY +YD +IL  DGR++SKL+F  W P  A P +KM Y +GK   +   +G  D+ A+   D++ ALGL  + +D D
Sbjct:    3 EPHTKTAGVPLQYANAGASTGPIHPTEEAVAAFKDIKMKRKFRFVFYRIDGAQIVVDKAGPPTGTHVDLMAALPHSDCRYVIYDHDILLPDGRRSSKLYFLFWAPPAAPPNSKMAYSHGKTAFRAHCDGCLDINASEIVDVQSALGLATDDDDDD 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53788.12737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRB2_ECTSI2.510e-7576.54ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835ZF29_9STRA3.930e-4560.16ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
K3WUI7_GLOUD8.870e-3845.12ADF-H domain-containing protein n=1 Tax=Globispora... [more]
A0A8K1CHH4_PYTOL3.750e-3644.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BDZ2_PYTIN3.540e-3343.56ADF-H domain-containing protein n=1 Tax=Pythium in... [more]
A0A3R7G6H8_9STRA4.440e-3344.12ADF-H domain-containing protein n=3 Tax=Phytophtho... [more]
W2GSY4_PHYPR7.870e-3241.98ADF-H domain-containing protein n=17 Tax=Peronospo... [more]
A0A3F2RS88_9STRA9.070e-3244.12ADF-H domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S2C4C5_9STRA9.080e-3244.30Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024UN70_9STRA9.310e-3240.65ADF-H domain-containing protein n=1 Tax=Aphanomyce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 167..291
e-value: 5.8E-14
score: 62.4
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 170..282
e-value: 2.0E-19
score: 69.6
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 161..291
score: 18.501
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 158..286
e-value: 7.0E-24
score: 85.9
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 159..282
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOGcoord: 159..282
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 163..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53788contigH-elongata_contig53788:1355..2899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53788.12737.1mRNA_H-elongata_contig53788.12737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53788 71..3308 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53788.12737.1 ID=prot_H-elongata_contig53788.12737.1|Name=mRNA_H-elongata_contig53788.12737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp
MEVKGNMGDGGRKVNNAGAGRCAVNGNAVLGSSEMSFHHGRDTMNAHSDP
ESTRQNQEEPEGRHRSPSQNGHMLSQANGGISGIENQSTNHQSAASGSAP
VVASSPAEGTIMGGYNSAMLAGSVAAAGAAGAVAAPKTTAVTEPHLKTAG
QPLKHADTAKSPKGVSTDLQSKLRALKLRRKHRFLVMRIEGTEVVAETVG
APSTGPEELRAALPFSDCRYAVYDQEILTRDGRKTSKLFFFSWLPHNATP
QNKMVYLYGKVTVKQRLEGVYDVAANMFEDIEVALGLEQEGEDSDIDFEN
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR017904ADF/Cofilin