prot_H-elongata_contig53735.12731.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53735.12731.1
Unique Nameprot_H-elongata_contig53735.12731.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
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BLAST of mRNA_H-elongata_contig53735.12731.1 vs. uniprot
Match: D7G1X6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X6_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 6.200e-47
Identity = 68/94 (72.34%), Postives = 84/94 (89.36%), Query Frame = 0 
Query:   14 PKVPFCRAEADVANMWFPAWDPENQSVITAKRVVVFGGKGIDYYSRRSGDRLSYLSDMWSLHITNTGFEWSRVTPLGKVQPSPRWQTGDSVAFG 107
            P+VPFCRA ADVANMW P W+P++Q V TAKRVVVFGG+G+DYY +R+ D+LSYLSDMW+LHITNTGF W++V P+G+V+PS RWQTGDSVA+G
Sbjct:    5 PRVPFCRAGADVANMWMPVWNPDSQLVETAKRVVVFGGRGVDYYDKRADDQLSYLSDMWALHITNTGFRWNKVVPIGQVRPSARWQTGDSVAYG 98
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BLAST of mRNA_H-elongata_contig53735.12731.1 vs. uniprot
Match: A0A6H5KHR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR5_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.730e-45
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0 
Query:    5 KAGGGAKSEPKVPFCRAEADVANMWFPAWDPENQSVITAKRVVVFGGKGIDYYSRRSGDRLSYLSDMWSLHITNTGFEWSRVTPLGKVQPSPRWQTGDSVAFG 107
            + G G    P VPFCRA ADVANMW P W+P++Q V TAKRVVVFGG+G+DYY++R+ D+LSYLSDMW+LHITNTGF W++V P+G V PS RWQTGDSVA+G
Sbjct:   90 RGGSGMMQLPSVPFCRAGADVANMWMPVWNPDSQLVETAKRVVVFGGRGVDYYNKRADDQLSYLSDMWALHITNTGFRWNKVVPVGHVHPSARWQTGDSVAYG 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53735.12731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1X6_ECTSI6.200e-4772.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHR5_9PHAE3.730e-4567.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53735contigH-elongata_contig53735:531..2305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53735.12731.1mRNA_H-elongata_contig53735.12731.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53735 531..2305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53735.12731.1 ID=prot_H-elongata_contig53735.12731.1|Name=mRNA_H-elongata_contig53735.12731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
SGAGKAGGGAKSEPKVPFCRAEADVANMWFPAWDPENQSVITAKRVVVFG
GKGIDYYSRRSGDRLSYLSDMWSLHITNTGFEWSRVTPLGKVQPSPRWQT
GDSVAFGKR*
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