prot_H-elongata_contig53669.12723.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53669.12723.1
Unique Nameprot_H-elongata_contig53669.12723.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.290e-82
Identity = 135/171 (78.95%), Postives = 141/171 (82.46%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSLEL+ANKDIKQ+IECTEDFNKYRSL KHLQ+H + GK                    DGYQARCIHGDKTQEERDYVLKDFK GNF VLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG AVSFFGSKNSRN REL+KIL ES N VPP+L
Sbjct:  331 QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPEL 501          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: D8LL45_ECTSI (Ethylene-responsive DEAD box RNA helicase, putative (RH30) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL45_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 9.820e-78
Identity = 123/159 (77.36%), Postives = 135/159 (84.91%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAG------KDGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRN--CRELMKILHESGNMVPPDL 151
            QV VGSLEL+ANKDIKQ+IECTE+FNKYRSL KHLQ+H   G      +D YQARCI GDKT+E RDYVLKDFK GNF VLVATDVAARGLD+K+IQMVINFDFPNNMED++HRI RCGRAGAKG AV+FFGSKNSRN  C EL+KIL ESGN VPP L
Sbjct:    6 QVKVGSLELAANKDIKQIIECTEEFNKYRSLCKHLQQHGRNGNLLVFVEDSYQARCIQGDKTREGRDYVLKDFKSGNFQVLVATDVAARGLDMKEIQMVINFDFPNNMEDFMHRIKRCGRAGAKGVAVNFFGSKNSRNNGC-ELIKILTESGNNVPPVL 163          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.590e-62
Identity = 106/171 (61.99%), Postives = 124/171 (72.51%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSLELSANKDI+QVIE  EDF KYR L+KHLQEH+NAG+                    +G+ A  IHGDK Q ERD VL DFK G  ++LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF +KNS+  REL++IL ++   VP +L
Sbjct:  228 QVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSEL 398          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.160e-60
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSLELSANKD+ Q+IEC EDF KYR L +HL+E     K                    DGY ARCIHGDK Q+ERD+VL++F+     +LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF SKN++  REL++IL+++G+ VP +L
Sbjct:  315 QVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQEL 485          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.590e-59
Identity = 102/171 (59.65%), Postives = 127/171 (74.27%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSL+LSANKDI+Q +E  ED++KY  L+++L+EH++ G+                    DG+ A  IHGDKTQ+ERDY LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF SKN+R  R+L KIL ESGN VPP L
Sbjct:  266 QVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPAL 436          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 194 bits (494), Expect = 3.920e-57
Identity = 98/170 (57.65%), Postives = 122/170 (71.76%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK-------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSLEL AN DI+QVIE  ED+ KY  L +  +                          DG+ ARCIHGDKTQ+ERD+VLK+F+  +  +LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFGSKN++  REL++I+ E+G+ VP  L
Sbjct:  310 QVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGPKALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSL 479          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.490e-54
Identity = 99/171 (57.89%), Postives = 118/171 (69.01%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSL+L+ANKDIKQ +   ED +KY  L++ L+E++  GK                    DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL ESGN VP  L
Sbjct:  175 QVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAAL 345          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: W7U315_9STRA (Dead-box atp-dependent rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U315_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.020e-53
Identity = 99/171 (57.89%), Postives = 119/171 (69.59%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGK--------------------DGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSL+L+ANKDIKQ +   ED +KY  L++ L+E++  GK                    DG+ A  IHGDK+Q++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K++R  REL KIL ESGN VP  L
Sbjct:  305 QVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHARISRELAKILEESGNQVPAAL 475          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A7S3NF06_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NF06_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.590e-52
Identity = 91/171 (53.22%), Postives = 118/171 (69.01%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHS--------------------NAGKDGYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSL+L+AN DI+Q+I   ED  KY+ ++  L +                      +  KD + ARCIHGDK+Q ERD+VL DF+ G  M+L+ATDVAARGLD+KDIQ V+NFDFP+N+EDY+HRIGRCGRAG KG A+SFF +K+ +  R L+KIL ++   VPPDL
Sbjct:  339 QVTVGSLDLAANTDIEQIIHVVEDATKYKRMVDFLHDRPANDKMLVFVETKRGADQLTRSLQKDRFSARCIHGDKSQAERDWVLNDFRSGKCMLLIATDVAARGLDIKDIQTVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTAKSIKWSRRLIKILQDAKQQVPPDL 509          
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Match: A0A7S2BHU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHU1_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.380e-52
Identity = 93/171 (54.39%), Postives = 119/171 (69.59%), Query Frame = 0
Query:    1 QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEH-----------SNAGKD---------GYQARCIHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPDL 151
            QVTVGSLEL+ANK I Q++E  +D +KYR  I  ++EH           +  G D         GY A  IHGDKTQ+ERD  L+DF+ G  M+L+ATDVAARGLDVK++QMV+NFD PNN EDY+HRIGRCGRAGA G ++S+F  KN+R  R+L+K+L ++G  VP DL
Sbjct:  296 QVTVGSLELAANKSITQMVEVVDDNDKYRRCIGFMREHFKGERVIVFVETKRGADQLTRSIRQEGYPANAIHGDKTQDERDRTLQDFRDGRIMILIATDVAARGLDVKNVQMVVNFDMPNNAEDYVHRIGRCGRAGATGTSMSYFTRKNARMGRDLVKLLRDAGQEVPRDL 466          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53669.12723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI1.290e-8278.95DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LL45_ECTSI9.820e-7877.36Ethylene-responsive DEAD box RNA helicase, putativ... [more]
A0A6H5KBB2_9PHAE3.590e-6261.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA6.160e-6059.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZEN1_9STRA1.590e-5959.65DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9KNI1_HETAK3.920e-5757.65Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9CVW6_9STRA1.490e-5457.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U315_9STRA2.020e-5357.89Dead-box atp-dependent rna helicase n=1 Tax=Nannoc... [more]
A0A7S3NF06_9STRA3.590e-5253.22Hypothetical protein n=3 Tax=Aureoumbra lagunensis... [more]
A0A7S2BHU1_9STRA4.380e-5254.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 29..116
e-value: 6.7E-31
score: 118.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 29..116
e-value: 5.9E-28
score: 97.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 14..151
score: 19.786
NoneNo IPR availableGENE3D3.40.50.300coord: 5..151
e-value: 1.3E-43
score: 150.3
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 43..143
NoneNo IPR availablePANTHERPTHR24031:SF683coord: 43..143
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53669contigH-elongata_contig53669:1400..1896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53669.12723.1mRNA_H-elongata_contig53669.12723.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53669 1400..1896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53669.12723.1 ID=prot_H-elongata_contig53669.12723.1|Name=mRNA_H-elongata_contig53669.12723.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
QVTVGSLELSANKDIKQVIECTEDFNKYRSLIKHLQEHSNAGKDGYQARC
IHGDKTQEERDYVLKDFKMGNFMVLVATDVAARGLDVKDIQMVINFDFPN
NMEDYIHRIGRCGRAGAKGRAVSFFGSKNSRNCRELMKILHESGNMVPPD
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase