prot_H-elongata_contig5366.12722.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5366.12722.1
Unique Nameprot_H-elongata_contig5366.12722.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length496
Homology
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BLAST of mRNA_H-elongata_contig5366.12722.1 vs. uniprot
Match: D8LB23_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB23_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 9.090e-42
Identity = 135/333 (40.54%), Postives = 182/333 (54.65%), Query Frame = 0 
Query:    1 MRSFVDKVKASNWGKTLRAVADLGAVATSVGVSVGVAATEPLAKDVARSIESLTVKGLQSTSSPAKADSLRREQQTVQRAKAEAEQKVEALRRRVEETLAEAAILEETTAARFKEQGEWNATLAERQEAVQTAQQELVGAESLVAEAGEVLGERKAKEQKAMEALRNAKAARDAFLQASTTAQRRVYSAEVVVAAAXXXXXXXXXXXXXXXXVLRSASDQAADTESQRSKVFEEQDSAQEALGKAKDMCLSGRAALSEIRDRQAVVQAGLRERDRKERAAAVRVKELGDQAETARARTIQLKIYAEENTTAAGAAAQAVESFARREARLGAEA 333
            MRSFVDKVKA  WG  + AVA LGA ATSVGV              AR +E LT           + D + R+QQ   RAK EAE+K  A  RR EE   EA+ LEET   + +EQ EWN  L ER+  V +A++ L   ES+  EA EV  +RKA E  A E  R ++AAR+ FLQAS  ++++V +AE  V AA                +L    ++A   E  R +V  +  SA+    +AK+  L  +AALS+ R   A +Q   RE  R+E  A  ++KELGD AE+  AR ++ +  AEE+  AA   A A+++ AR+E+RL AEA
Sbjct:  203 MRSFVDKVKAGKWGNVMSAVASLGAAATSVGVXXXXXXXXXXXXXXARGLEELT--------GSVEVDPITRKQQVANRAKLEAERKRGAFERRAEEFSTEASKLEETMKTQLEEQKEWNKALVERRIEVASARKSLESTESITKEAAEVASDRKASELAAAEKARRSRAAREEFLQASANSEKKVSTAEATVTAAERRLWEALKTLDTARHMLALTYEEATALEGTRDQVMADTASAEGVFEEAKEATLESKAALSQQRTDLAALQREFRESSRREEQAMAKIKELGDAAESIGARALRNRKSAEESKVAARREAGAIDAAARQESRLAAEA 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5366.12722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB23_ECTSI9.090e-4240.54Heat shock protein 40 like protein/ DnaJ domain co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..362
NoneNo IPR availableCOILSCoilCoilcoord: 67..108
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availableCOILSCoilCoilcoord: 193..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5366contigH-elongata_contig5366:78..6368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5366.12722.1mRNA_H-elongata_contig5366.12722.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5366 66..8248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5366.12722.1 ID=prot_H-elongata_contig5366.12722.1|Name=mRNA_H-elongata_contig5366.12722.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=496bp
MRSFVDKVKASNWGKTLRAVADLGAVATSVGVSVGVAATEPLAKDVARSI
ESLTVKGLQSTSSPAKADSLRREQQTVQRAKAEAEQKVEALRRRVEETLA
EAAILEETTAARFKEQGEWNATLAERQEAVQTAQQELVGAESLVAEAGEV
LGERKAKEQKAMEALRNAKAARDAFLQASTTAQRRVYSAEVVVAAAERRV
AEARKTLDESRDVLRSASDQAADTESQRSKVFEEQDSAQEALGKAKDMCL
SGRAALSEIRDRQAVVQAGLRERDRKERAAAVRVKELGDQAETARARTIQ
LKIYAEENTTAAGAAAQAVESFARREARLGAEAVAARAAEEADSASAQEE
KLRQEREEAAAVARVAVARAKALEDAEADAAETARTARATARRAAEDALA
VVTEVGGGDENLSIRDAKGDVRIDMMQSRSDNGSLSGSGPGPTGGRGVKV
YETEGIEAQSERGVRPPTGEEGQGAETEGSKVPSWVGAIGTGDVG*
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